DN617775
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_RICAE (50S ribosomal protein L3 OS=Rickettsia africae (strain ESF-5) GN=rplC PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.239e-34 Identity = 79/206 (38.35%), Postives = 116/206 (56.31%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYK 620 +IA K G+T+ ++ G RI ++++ VDD V KT EK G+ +L VG KK +TKP F + K KL+EF ++E+ + I SL V HF GQ+VDI R F+G+ ASHG S+SHRS GSTGQR PGKVF Q T++N+ ++ +D R L+ ++G +PG +++ +KDA+ K Sbjct: 5 IIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVVGVKDKKISRVTKPMRQVFANAKISPKTKLKEFRISEENFIDIAASLEVDHFTAGQFVDITATTIGKGFAGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIFAVDKERKLIMIQGSIPGHKNSYLSVKDAIKK 210
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_RICRS (50S ribosomal protein L3 OS=Rickettsia rickettsii (strain Sheila Smith) GN=rplC PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.149e-34 Identity = 78/206 (37.86%), Postives = 116/206 (56.31%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYK 620 +IA K G+T+ ++ G RI ++++ VDD V KT EK G+ +L +G KK +TKP F + K KL+EF ++E+ + I SL V HF GQ+VDI R F+G+ ASHG S+SHRS GSTGQR PGKVF Q T++N+ ++ +D R L+ ++G +PG +++ +KDA+ K Sbjct: 5 IIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISRVTKPMRQVFANAKISPKTKLKEFRISEENFIDIAASLEVDHFTAGQFVDITATTIGKGFAGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIFAVDKERKLIMIQGSIPGHKNSYLSVKDAIKK 210
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_RICRO (50S ribosomal protein L3 OS=Rickettsia rickettsii (strain Iowa) GN=rplC PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.149e-34 Identity = 78/206 (37.86%), Postives = 116/206 (56.31%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYK 620 +IA K G+T+ ++ G RI ++++ VDD V KT EK G+ +L +G KK +TKP F + K KL+EF ++E+ + I SL V HF GQ+VDI R F+G+ ASHG S+SHRS GSTGQR PGKVF Q T++N+ ++ +D R L+ ++G +PG +++ +KDA+ K Sbjct: 5 IIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISRVTKPMRQVFANAKISPKTKLKEFRISEENFIDIAASLEVDHFTAGQFVDITATTIGKGFAGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIFAVDKERKLIMIQGSIPGHKNSYLSVKDAIKK 210
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_RICPU (50S ribosomal protein L3 OS=Rickettsia peacockii (strain Rustic) GN=rplC PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.149e-34 Identity = 78/206 (37.86%), Postives = 116/206 (56.31%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYK 620 +IA K G+T+ ++ G RI ++++ VDD V KT EK G+ +L +G KK +TKP F + K KL+EF ++E+ + I SL V HF GQ+VDI R F+G+ ASHG S+SHRS GSTGQR PGKVF Q T++N+ ++ +D R L+ ++G +PG +++ +KDA+ K Sbjct: 5 IIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISRVTKPMRQVFANAKISPKTKLKEFRISEENFIDIAASLEVDHFTAGQFVDITATTIGKGFAGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIFAVDKERKLIMIQGSIPGHKNSYLSVKDAIKK 210
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_METSB (50S ribosomal protein L3 OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=rplC PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.149e-34 Identity = 79/204 (38.73%), Postives = 113/204 (55.39%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 +IA K G+T ++ G +PV+VL +D V +T E+ G+ +LQ+G G+ K K+++K E G F V K KL EF V E LLP+G + HF+ GQ+VD+ RW F G+ A+HG SLSHRS GSTG R PGK F + T N+ V ++D R L+ V G VPG +G ++ ++DA+ Sbjct: 5 VIAQKLGMTRVFNDGGEHVPVTVLKLDGCQVVAHRTKERNGYTALQLGIGRAKVKNVSKAERGRFAIAEVEPKLKLAEFRVEESDLLPVGAEITADHFVVGQFVDVTGTSIGKGFAGPMKRWNFGGLRATHGVSLSHRSHGSTGGRQDPGKTFKNKKMAGHMGAERVTTLNLKVVQLDIERGLILVEGAVPGVAGGWIQVRDAI 208
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_RHIL3 (50S ribosomal protein L3 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=rplC PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.064e-33 Identity = 79/204 (38.73%), Postives = 113/204 (55.39%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 +IA K G+T ++ G +PV+VL ++ V +T EK G+ ++Q+G GQ K K+ +K G+F V K KL EF V+ED LL +GT + HF GQ VD+ R GF G+ A+HG S+SHRS GSTG R PGKVF + T +N+ V D R L+ ++G VPG+ G ++ ++DAV Sbjct: 5 VIAQKVGMTRVYNDAGEHVPVTVLRMEGCQVVATRTVEKNGYTAVQLGAGQAKVKNTSKAMRGNFAIANVEPKAKLTEFRVSEDQLLEVGTEIKAGHFAAGQLVDVTGTTIGKGFAGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVVSTDEDRGLILIKGAVPGSKGAWIIVRDAV 208
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_BEII9 (50S ribosomal protein L3 OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=rplC PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.064e-33 Identity = 80/206 (38.83%), Postives = 113/206 (54.85%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYK 620 +IA K G+T + G IPV+VL +D V +T E+ G+ ++Q+G G+ K K+++K E G F V K KL EF V + LLPIG + HF+ GQ+VD+ RW F G+ A+HG S+SHRS GSTG R PGK F + T N+ V + D R L+ V G VPG +G +++++DAV K Sbjct: 5 VIAQKLGMTRVFTDAGEHIPVTVLKLDGCQVVGHRTKEQNGYVAVQLGIGRAKVKNVSKAERGRFAVAKVEPKLKLAEFRVDDATLLPIGAEITADHFVVGQFVDVTGTSTGKGFAGAMKRWNFGGLRATHGVSISHRSHGSTGGRQDPGKTFKNKKMAGHLGTERVTTLNLRVVQTDVERGLILVEGAVPGTAGGWIYVRDAVKK 210
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_PHOLL (50S ribosomal protein L3 OS=Photorhabdus luminescens subsp. laumondii GN=rplC PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.390e-33 Identity = 78/204 (38.24%), Postives = 112/204 (54.90%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 L+ K G+T + + G IPV+V+ ++DN V+QVK + +G+ ++QV G KK + KPE GHF GV R LREF ++E +G S+ V F + VD+ RW F+ ASHG SLSHR GS GQ PGKVF + TV+++ V ++D RNL+ V+G VPG++G + +K AV Sbjct: 4 LVGKKVGMTRIFTEDGVSIPVTVIEIEDNRVTQVKELDNDGYRAIQVTTGSKKASRVNKPEAGHFAKAGVEAGRILREFRLSEGEEYAVGQSISVEIFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDASHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVDAERNLLLVKGAVPGSTGGNLIVKPAV 207
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_ERWCT (50S ribosomal protein L3 OS=Erwinia carotovora subsp. atroseptica GN=rplC PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.815e-33 Identity = 78/204 (38.24%), Postives = 113/204 (55.39%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 L+ K G+T + + G IPV+V+ ++ N V+QVK +G+ ++QV G KK +TKPE GHF GV R LREF ++E +G S+ V F + VD+ RW F+ A+HG SLSHR+ GS GQ PGKVF + TV+++ V ++D RNL+ V+G VPGA+G+ + +K AV Sbjct: 4 LVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTAGAKKANRVTKPEAGHFAKAGVEAGRTLREFRLSEGEEFTVGQSISVEIFADIKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVDAERNLLLVKGAVPGATGSDLIVKPAV 207
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_ROSDO (50S ribosomal protein L3 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=rplC PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.371e-33 Identity = 83/215 (38.60%), Postives = 119/215 (55.35%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKK-PDVXLLP 644 +IA K G+T + + G +IPV+VL +D V +T EK+G+ ++Q+G G K K ++ GHF A V KRK+ EF V + L+ +G + H+ GQ+VD+ R F G+ ASHG S+SHRS GSTGQ PGKVF + T +N+ V + D R L+ V+G VPG+ G +V +KDAV K P+ +LP Sbjct: 6 VIAKKVGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTSEKDGYSAVQLGAGTAKAKRTSQAMRGHFAAAKVEPKRKVAEFRVDPENLIGVGEEITANHYFEGQFVDVAGTSIGKGFAGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVVRTDANRGLIMVKGAVPGSKGGWVTVKDAVKKPFPENAILP 220 The following BLAST results are available for this feature:
BLAST of DN617775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617775 ID=DN617775; Name=DN617775; organism=Citrus sinensis; type=EST; length=655bpback to top |