DN617775
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_RICCN (50S ribosomal protein L3 OS=Rickettsia conorii GN=rplC PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.371e-33 Identity = 77/206 (37.38%), Postives = 116/206 (56.31%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYK 620 +IA K G+T+ ++ G RI ++++ VDD V KT EK G+ +L +G KK +TKP F + K KL+EF ++E+ + I SL V HF GQ+VDI R F+G+ ASHG S+SHRS GSTGQR PGKVF + T++N+ ++ +D R L+ ++G +PG +++ +KDA+ K Sbjct: 5 IIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISRVTKPMRQVFANAKISPKTKLKEFRISEENFIDIAASLEVDHFTAGQFVDITATTIGKGFAGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNKVTIQNLKIFAVDKERKLIMIQGSIPGHKNSYLSVKDAIKK 210
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_WIGBR (50S ribosomal protein L3 OS=Wigglesworthia glossinidia brevipalpis GN=rplC PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.096e-33 Identity = 80/204 (39.22%), Postives = 110/204 (53.92%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 LI K G+T T++ G+ IPV+V+ + DN + Q+K EK+G+ S+QV G KK K +GHF+ V L R L EF V +++ +G L + FI V+I RW F G ASHG SLSHR+ GS GQ PGKVF + TVKN++V KID L+ ++G VPG+ G+ + IK V Sbjct: 4 LIGRKIGMTRTFNSDGSSIPVTVIKISDNKIVQIKKIEKDGYSSIQVTTGVKKFSRENKSIIGHFKKNKVELGRGLWEFKVDKNSKFYVGQVLSINTFININKVNITGISKGKGFSGTMKRWNFHGQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMSGHLGYNKNTVKNLFVVKIDLEHELLLIKGSVPGSKGSDLIIKPVV 207
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_RICFE (50S ribosomal protein L3 OS=Rickettsia felis GN=rplC PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.096e-33 Identity = 77/206 (37.38%), Postives = 116/206 (56.31%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYK 620 +IA K G+T+ ++ G RI ++++ VDD V KT EK G+ +L +G KK +TKP F + K KL+EF ++E+ + I SL V +F GQ+VDI R F+G+ ASHG S+SHRS GSTGQR PGKVF Q T++N+ ++ +D R L+ ++G +PG +++ +KDA+ K Sbjct: 5 IIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGIKDKKISRVTKPMKQVFANAKISPKTKLKEFRISEENFIDIAASLEVDYFTAGQFVDITATTIGKGFAGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIFAVDKERKLIMIQGSIPGHKNSYLSVKDAIKK 210
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_MESSB (50S ribosomal protein L3 OS=Mesorhizobium sp. (strain BNC1) GN=rplC PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.096e-33 Identity = 83/216 (38.43%), Postives = 119/216 (55.09%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKKPDVXLLPFP 650 +IA K G+T +++ G IPV+VL +++ V +T EK G+ ++Q+G G K K+ +K GHF A V K K+ EF V+ + LL +G + HF+PGQ VD+ R F G A+HG S+SHR+ GSTGQR PGKVF + T +N+ V D R L+ VRG VPG+ G+++ ++DAV K P P P Sbjct: 5 VIAQKIGMTRVYNETGEHIPVTVLRMENCQVVAQRTEEKNGYTAVQLGVGLAKVKNTSKALRGHFAAASVEPKAKVAEFRVSPENLLDVGAEITADHFVPGQKVDVTGTSIGKGFQGVMKRHNFGGGRATHGNSVSHRTHGSTGQRQDPGKVFKGKKMAGHMGDRRVTTQNLEVVSTDTERGLILVRGAVPGSKGSWIMVRDAV-KAPLPKEAPLP 219
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_ACIBS (50S ribosomal protein L3 OS=Acinetobacter baumannii (strain SDF) GN=rplC PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.096e-33 Identity = 73/206 (35.44%), Postives = 116/206 (56.31%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDAL--LPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 L+ KCG+T + G +PV+V+ VD N ++Q+KT E +G+ ++QV G++++ +T + GHF GV R ++EF VTE L +G ++GV F GQ VD+ RW F+ A+HG S+SHR LGSTGQ PG+VF + TV+ + + +D R+++ V+G +PGA+G V ++ A+ Sbjct: 5 LVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESRVTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKGFQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEIVSVDTERSVLVVKGAIPGATGGDVIVRPAI 210
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_RHORT (50S ribosomal protein L3 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=rplC PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.044e-33 Identity = 86/215 (40.00%), Postives = 118/215 (54.88%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKK-PDVXLLP 644 LIA K G+T + G +PV+VL V+ V V+T E +G+ ++Q+G G K K +K GHF A V K+K+ EF V+ED LL G L HF+ GQ VDI R F+G+ A+HG S+SHRS GSTGQ PG+VF + T +++ V D R L+ V+G VPGA G ++ ++DAV KK P+ LP Sbjct: 5 LIAQKVGMTRLFTDEGTHVPVTVLKVEACQVVAVRTSETDGYTAVQLGAGVAKVKRTSKAMRGHFAAAKVEPKKKVVEFRVSEDCLLEPGAELSAAHFVAGQKVDIAGTTIGKGFAGAMKRHNFRGLEATHGVSVSHRSHGSTGQCQDPGRVFKGKKMAGHMGDTRITQQSLTVVATDADRGLILVKGSVPGADGAWLEVRDAVKKKLPEGVPLP 219
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_PECCP (50S ribosomal protein L3 OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=rplC PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.044e-33 Identity = 78/204 (38.24%), Postives = 112/204 (54.90%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 L+ K G+T + + G IPV+V+ ++ N V+QVK +G+ ++QV G KK +TKPE GHF GV R LREF ++E +G S+ V F + VD+ RW F+ A+HG SLSHR GS GQ PGKVF + TV+++ V ++D RNL+ V+G VPGA+G+ + +K AV Sbjct: 4 LVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTTGAKKANRVTKPEAGHFAKAGVEAGRTLREFRLSEGEEFTVGQSISVEIFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVDAERNLLLVKGAVPGATGSDLIVKPAV 207
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_ACIAD (50S ribosomal protein L3 OS=Acinetobacter sp. (strain ADP1) GN=rplC PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.282e-33 Identity = 74/206 (35.92%), Postives = 115/206 (55.83%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDAL--LPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 L+ KCG+T + G +PV+V+ VD N ++Q+KT E +G+ ++QV G++++ +T + GHF GV R ++EF VTE L IG ++GV F GQ VD+ RW F+ A+HG S+SHR LGSTGQ PG+VF + TV+ + + ID R+++ V+G +PGA+G V ++ + Sbjct: 5 LVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESRVTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKGFQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEIVSIDAERSVLVVKGAIPGATGGDVIVRPTI 210
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_BRUSI (50S ribosomal protein L3 OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=rplC PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.009e-33 Identity = 79/204 (38.73%), Postives = 111/204 (54.41%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 +IA K G+T ++ G +PV+VL +++ V +T EK G+ ++Q+G G K K+ +K GHF V K KL EF V+ D LL +G + HF+ GQ VD+ R F G ASHG S++HRS GSTGQR PGKVF + T +N+ V D R L+ VRG VPG+ G ++ ++DAV Sbjct: 5 VIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKNTSKAMRGHFAKAEVEPKAKLAEFRVSPDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGFAGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVVSTDSDRGLILVRGAVPGSKGAWILVRDAV 208
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_BRUO2 (50S ribosomal protein L3 OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=rplC PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.009e-33 Identity = 79/204 (38.73%), Postives = 111/204 (54.41%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 +IA K G+T ++ G +PV+VL +++ V +T EK G+ ++Q+G G K K+ +K GHF V K KL EF V+ D LL +G + HF+ GQ VD+ R F G ASHG S++HRS GSTGQR PGKVF + T +N+ V D R L+ VRG VPG+ G ++ ++DAV Sbjct: 5 VIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKNTSKAMRGHFAKAEVEPKAKLAEFRVSPDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGFAGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVVSTDSDRGLILVRGAVPGSKGAWILVRDAV 208 The following BLAST results are available for this feature:
BLAST of DN617775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617775 ID=DN617775; Name=DN617775; organism=Citrus sinensis; type=EST; length=655bpback to top |