DN617771

Overview
NameDN617771
Unique NameDN617771
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length795
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617771 vs. ExPASy Swiss-Prot
Match: RIR2_ENCCU (Ribonucleoside-diphosphate reductase small chain OS=Encephalitozoon cuniculi GN=ECU06_0730 PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.520e-65
Identity = 122/209 (58.37%), Postives = 152/209 (72.73%), Query Frame = 3
Query:  168 EDQEPILMEQNQRFCMFPIRYKQLWEMYKKAEASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVARKAKWALDWIHS*CKGRSVISLCPMCSSSSFAERLVGFACVEGIFFSGSFCAIFWLXKRGLMPGLTFSNEL 794
            E+ E +L  + +RF + PI+Y  +W+MYKKAE+SFWT EEV L +D+  W +L   E+HFIS+VLAFFAASDGIV  NL  RF  ++++ EAR FYGFQ+A+ENIHSEMYSLL++TYI+D+ EK+ LF+AI  IP V  KA WA+ WI                 +S FA RLV FACVEGIFFSG+F +IFWL KRGLMPGLTFSNEL
Sbjct:    5 EETELLLDPKEERFVLLPIKYHDIWKMYKKAESSFWTVEEVSLDKDIDDWGKLNAKERHFISYVLAFFAASDGIVNLNLVERFSTEVKVLEARFFYGFQMAIENIHSEMYSLLIDTYIRDNDEKNFLFDAIRTIPSVKEKADWAIRWIED--------------KNSDFATRLVAFACVEGIFFSGAFASIFWLKKRGLMPGLTFSNEL 199          
BLAST of DN617771 vs. ExPASy Swiss-Prot
Match: RIR2_SCHPO (Ribonucleoside-diphosphate reductase small chain OS=Schizosaccharomyces pombe GN=suc22 PE=2 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 9.577e-65
Identity = 128/224 (57.14%), Postives = 161/224 (71.88%), Query Frame = 3
Query:  129 KNETGNE-VNQREQEDQEPILMEQNQRFCMFPIRYKQLWEMYKKAEASFWTAEEVDLSQDVQHWERLLDS-EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVARKAKWALDWIHS*CKGRSVISLCPMCSSSSFAERLVGFACVEGIFFSGSFCAIFWLXKRGLMPGLTFSNEL 794
            K E G+  + ++E E  E +L     RF +FPI+Y ++W+ YKKAEASFWTAEE+DLS+D+  W+  L++ E++FIS VLA+FAASDGIV ENL  RF +++QIPEAR  YGFQI +ENIHSE YSLLL+TYI++ KEK R F+AI  +  +  KAKWAL WI+                 S++A RLV FA VEGIFFSGSF +IFWL KRGLMPGLTFSNEL
Sbjct:   49 KQEGGDYYLGKKEDELDEVVLRPNPHRFVLFPIKYHEIWQFYKKAEASFWTAEEIDLSKDLVDWDNKLNADERYFISTVLAYFAASDGIVNENLLERFSSEVQIPEARCVYGFQIMIENIHSETYSLLLDTYIREPKEKQRHFDAILTMGSIKAKAKWALRWIND--------------EDSTYAIRLVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNEL 258          
BLAST of DN617771 vs. ExPASy Swiss-Prot
Match: RIR2_PLAFG (Ribonucleoside-diphosphate reductase small subunit OS=Plasmodium falciparum (isolate FCR-3 / Gambia) GN=RNR2 PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.059e-63
Identity = 121/204 (59.31%), Postives = 149/204 (73.04%), Query Frame = 3
Query:  183 ILMEQNQRFCMFPIRYKQLWEMYKKAEASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVARKAKWALDWIHS*CKGRSVISLCPMCSSSSFAERLVGFACVEGIFFSGSFCAIFWLXKRGLMPGLTFSNEL 794
            IL +++ RF ++PI Y  ++  YKKAEA FWTAEE+D S D++ +E+L ++EKHFI HVLAFFAASDGIVLENLA  FL ++QI EA+ FY FQIA+ENIHSE YSLL++ YIKD KE+  LF+AIENIP V  KA WA  WI+                ++SFAER+V  ACVEGI FSGSFCAIFW  K+  + GLTFSNEL
Sbjct:    4 ILNKESDRFTLYPILYPDVFPFYKKAEACFWTAEEIDYSSDLKDFEKLNENEKHFIKHVLAFFAASDGIVLENLAVSFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERLNLFHAIENIPAVKNKALWAAKWIN---------------DTNSFAERIVANACVEGILFSGSFCAIFWFKKQNKLHGLTFSNEL 192          
BLAST of DN617771 vs. ExPASy Swiss-Prot
Match: RIR2_RSIV (Ribonucleoside-diphosphate reductase small chain OS=Red sea bream iridovirus GN=RR-2 PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.533e-51
Identity = 102/188 (54.26%), Postives = 131/188 (69.68%), Query Frame = 3
Query:  237 LWEMYKKAEASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQ-IPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVARKAKWALDWIHS*CKGRSVISLCPMCSSSSFAERLVGFACVEGIFFSGSFCAIFWLXKRGLMPGLTFSNEL 794
            LW MYKKA ASFWT EEVDLS DV+HW ++L ++E+ F+SH+LAFFA +DGIV +NL   F  ++  IPEARAFYGFQ+A+ENIH+EMY+ L+ T +    +   LF+A E++PCV  KA+WA  W+++              +    A RL+ FA VEG+ FSGSF AIFWL KR LMPGL FSNEL
Sbjct:   13 LWAMYKKAVASFWTVEEVDLSTDVRHWTDKLTEAERRFMSHILAFFAMADGIVGDNLVCNFAKELDHIPEARAFYGFQVAIENIHAEMYTQLIITLVAKENQA-ALFSAAEDMPCVKAKAQWAAQWLNA--------------THKPIATRLLAFAAVEGVMFSGSFAAIFWLKKRSLMPGLAFSNEL 185          
BLAST of DN617771 vs. ExPASy Swiss-Prot
Match: RIR2_MIMIV (Ribonucleoside-diphosphate reductase small chain OS=Acanthamoeba polyphaga mimivirus GN=RNR2 PE=3 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 3.095e-47
Identity = 92/209 (44.02%), Postives = 136/209 (65.07%), Query Frame = 3
Query:  174 QEPILMEQNQRFCMFPIRYKQLWEMYKKAEASFWTAEEVDLSQDVQHWER-LLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVARKAKWALDWIHS*CKGRSVISLCPMCSSSSFAERLVGFACVEGIFFSGSFCAIFWLXKRGL--MPGLTFSNE 791
            +EPIL  +++++ + PI+Y+++W+ YK    ++WT EEVDL++DV  W   L D +++FI HVLAFFAA+DGIV  N+    ++ ++I EA   YGFQ AMEN H EMYSL+L T++KD   +++L N+I+ +P + +KA W   WI                S  ++A +LV F+ VEG+FFSGSF +IFWL  R +  MPGL  SN+
Sbjct:   98 KEPILSLKSEQYTVHPIKYQKVWDNYKDQMKNYWTVEEVDLAKDVNDWNNHLSDDDRNFIMHVLAFFAAADGIVNANIKENLIDVVKIKEAECAYGFQYAMENAHGEMYSLMLTTFVKDDALRNKLINSIKTMPSIKKKADWCNKWIK---------------SDKTYAHKLVAFSIVEGVFFSGSFASIFWLKTREMHVMPGLIISNQ 291          
BLAST of DN617771 vs. ExPASy Swiss-Prot
Match: RIR4_YEAST (Ribonucleoside-diphosphate reductase small chain 2 OS=Saccharomyces cerevisiae GN=RNR4 PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.101e-44
Identity = 90/212 (42.45%), Postives = 135/212 (63.68%), Query Frame = 3
Query:  153 NQREQEDQEPILMEQNQRFCMFPIRYKQLWEMYKKAEASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVARKAKWALDWIHS*CKGRSVISLCPMCSSSSFAERLVGFACVEGIFFSGSFCAIFWLXKRGLMPGLTFSN 788
            + +E E  E +LME ++RF MFPI+Y ++W  YKK EASFWTAEE++L++D + +++L D +K +I ++LA   +SD +V + L   F   +Q PE ++FYGFQI MENI+SE+YS++++ + KD K    LF  I N+P V  KA +   WI +                S +AERLV FA  EGIF +G++ ++FWL  + +MPGL  +N
Sbjct:   17 DMKEAEKDEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLTDDQKTYIGNLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDPK-NIPLFKEIANLPEVKHKAAFIERWISN--------------DDSLYAERLVAFAAKEGIFQAGNYASMFWLTDKKIMPGLAMAN 213          
BLAST of DN617771 vs. ExPASy Swiss-Prot
Match: RIR2_ASFWA (Ribonucleoside-diphosphate reductase small chain OS=African swine fever virus (isolate Warthog/Namibia/Wart80/1980) GN=War-054 PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.998e-42
Identity = 83/205 (40.49%), Postives = 122/205 (59.51%), Query Frame = 3
Query:  177 EPILMEQNQRFCMFPIRYKQLWEMYKKAEASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVARKAKWALDWIHS*CKGRSVISLCPMCSSSSFAERLVGFACVEGIFFSGSFCAIFWLXKRGLMPGLTFSNE 791
            E +L+E +QRF +FPI++ + W  YKK E+  WTA+EVD+ +D+  WE +   ++ F   +LAFF  +D IV+ENL   F+ +I++ E   FY  Q A E +HSE YS+ ++T I D KE+ R+F+ IE  P + + A+W   W+                + +S  ERLVGFA VEGI F   F AI +L ++ +MPGL   NE
Sbjct:    2 EELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKEQQRIFSGIEKHPIIKKMAQWVRQWMDP--------------TKNSLGERLVGFAAVEGILFQNHFVAIQFLKEQNIMPGLVSYNE 192          
BLAST of DN617771 vs. ExPASy Swiss-Prot
Match: RIR2_ASFP4 (Ribonucleoside-diphosphate reductase small chain OS=African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) GN=Pret-056 PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.998e-42
Identity = 83/205 (40.49%), Postives = 122/205 (59.51%), Query Frame = 3
Query:  177 EPILMEQNQRFCMFPIRYKQLWEMYKKAEASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVARKAKWALDWIHS*CKGRSVISLCPMCSSSSFAERLVGFACVEGIFFSGSFCAIFWLXKRGLMPGLTFSNE 791
            E +L+E + RF +FPI++ + W  YKK E+  WTA+EVD+ +D+  WE +  S++ F   +LAFF  +D IV+ENL   F+ +I++ E   FY  Q A E +HSE YS+ ++T I D KE+ R+F+ IE  P + + A+W   W+                + +S  ERLVGFA VEGI F   F AI +L ++ +MPGL   NE
Sbjct:    2 EELLIENSHRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKSQREFYKQILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKEQQRIFSGIEKHPIIKKMAQWVRQWMDP--------------TKNSLGERLVGFAAVEGILFQNHFVAIQFLKEQNIMPGLVSYNE 192          
BLAST of DN617771 vs. ExPASy Swiss-Prot
Match: RIR2_ASFM2 (Ribonucleoside-diphosphate reductase small chain OS=African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) GN=Mal-052 PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.998e-42
Identity = 83/205 (40.49%), Postives = 122/205 (59.51%), Query Frame = 3
Query:  177 EPILMEQNQRFCMFPIRYKQLWEMYKKAEASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVARKAKWALDWIHS*CKGRSVISLCPMCSSSSFAERLVGFACVEGIFFSGSFCAIFWLXKRGLMPGLTFSNE 791
            E +L+E +QRF +FPI++ + W  YKK E+  WTA+EVD+ +D+  WE +   ++ F   +LAFF  +D IV+ENL   F+ +I++ E   FY  Q A E +HSE YS+ ++T I D KE+ R+F+ IE  P + + A+W   W+                + +S  ERLVGFA VEGI F   F AI +L ++ +MPGL   NE
Sbjct:    2 EELLIENSQRFTIFPIQHPECWNWYKKLESMTWTAQEVDMCKDIDDWEAMPKPQREFYKQILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKEQQRIFSGIEKHPIIKKMAQWVRQWMDP--------------ARNSLGERLVGFAAVEGILFQNHFVAIQFLKEQNIMPGLVSYNE 192          
BLAST of DN617771 vs. ExPASy Swiss-Prot
Match: RIR2_ASFK5 (Ribonucleoside-diphosphate reductase small chain OS=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) GN=Ken-056 PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.679e-42
Identity = 83/205 (40.49%), Postives = 121/205 (59.02%), Query Frame = 3
Query:  177 EPILMEQNQRFCMFPIRYKQLWEMYKKAEASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVARKAKWALDWIHS*CKGRSVISLCPMCSSSSFAERLVGFACVEGIFFSGSFCAIFWLXKRGLMPGLTFSNE 791
            E +L+E +QRF +FPI++ + W  YKK E+  WTA+EVD+ +D+  WE +   ++ F   +LAFF  +D IV+ENL   F+ +I++ E   FY  Q A E +HSE YS+ ++T I D KE+ R+F+ IE  P + + A+W   W+                  +S  ERLVGFA VEGI F   F AI +L ++ +MPGL   NE
Sbjct:    2 EELLIEDSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKEQQRIFSGIEKHPIIRKMAQWVQQWMDP--------------VKNSLGERLVGFAAVEGILFQNHFVAIQFLKEQNIMPGLVSYNE 192          
The following BLAST results are available for this feature:
BLAST of DN617771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
RIR2_ENCCU2.520e-6558.37Ribonucleoside-diphosphate reductase small chain O... [more]
RIR2_SCHPO9.577e-6557.14Ribonucleoside-diphosphate reductase small chain O... [more]
RIR2_PLAFG1.059e-6359.31Ribonucleoside-diphosphate reductase small subunit... [more]
RIR2_RSIV3.533e-5154.26Ribonucleoside-diphosphate reductase small chain O... [more]
RIR2_MIMIV3.095e-4744.02Ribonucleoside-diphosphate reductase small chain O... [more]
RIR4_YEAST1.101e-4442.45Ribonucleoside-diphosphate reductase small chain 2... [more]
RIR2_ASFWA2.998e-4240.49Ribonucleoside-diphosphate reductase small chain O... [more]
RIR2_ASFP42.998e-4240.49Ribonucleoside-diphosphate reductase small chain O... [more]
RIR2_ASFM22.998e-4240.49Ribonucleoside-diphosphate reductase small chain O... [more]
RIR2_ASFK56.679e-4240.49Ribonucleoside-diphosphate reductase small chain O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01K17_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001K17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617771 ID=DN617771; Name=DN617771; organism=Citrus sinensis; type=EST; length=795bp
CAACAATTGAAAATCTGTCCACTTGCTCTCTTTAACAACAAGAGGTTTTT
GCAGGGTTTTATTACTTTTCTTTCTCTTCTCGCCACAAATAACGAAAACA
GAACTTGTGAGAAAAAATGGGTTCCTTGAAAAATGAAACAGGGAATGAAG
TAAACCAACGTGAACAGGAAGACCAAGAGCCAATATTAATGGAACAAAAC
CAGAGGTTTTGTATGTTCCCCATAAGGTACAAGCAACTTTGGGAGATGTA
CAAGAAGGCTGAAGCCAGTTTTTGGACCGCCGAGGAGGTTGATCTTTCCC
AGGATGTACAGCACTGGGAACGACTATTGGATTCTGAGAAACACTTTATA
AGCCATGTGTTGGCATTCTTTGCTGCTTCTGATGGGATTGTTTTGGAAAA
TTTGGCTGCAAGGTTCCTAAATGACATTCAAATTCCAGAGGCTCGAGCGT
TTTATGGATTTCAAATAGCAATGGAGAATATTCATTCTGAGATGTACAGC
TTGCTTCTGGAGACATACATCAAAGACTCAAAAGAGAAGCATAGATTGTT
TAATGCAATTGAAAACATTCCCTGTGTGGCTCGTAAGGCTAAATGGGCTC
TGGATTGGATTCATAGTTGATGCAAAGGGAGGTCTGTCATCTCATTGTGC
CCCATGTGCAGTTCCAGCTCATTTGCAGAGAGACTTGTAGGTTTTGCTTG
TGTTGAAGGAATCTTCTTTTCAGGAAGCTTTTGTGCCATATTCTGGCTTN
AAAAGAGGGGACTGATGCCAGGTTTGACGTTCTCAAACGAGCTTA
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