DN617768

Overview
NameDN617768
Unique NameDN617768
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length659
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617768 vs. ExPASy Swiss-Prot
Match: ANTR6_ARATH (Probable anion transporter 6, chloroplastic OS=Arabidopsis thaliana GN=ANTR6 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.103e-13
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = -2
Query:  365 AFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYIL-QRGSWD-DVFKVAVVLYIIGTLVWNLFATGE 589
            +F+ SGLY  HQDI P YA +LLG++NT G + G+ G A TG++L    SW   +F  ++  Y+ GT+VW  FA+ E
Sbjct:  432 SFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGFLLDSTHSWTMSLFVPSIFFYLTGTVVWLAFASSE 508          
BLAST of DN617768 vs. ExPASy Swiss-Prot
Match: PHT45_ORYSJ (Probable anion transporter 5, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;5 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.319e-12
Identity = 35/77 (45.45%), Postives = 48/77 (62.34%), Query Frame = -2
Query:  365 AFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ-RGSWD-DVFKVAVVLYIIGTLVWNLFATGE 589
            +F+ SGLY  HQDI   YA +LLG++NT G + G+ G A TGY+L    SW   +F  ++  Y+ GT VW  FA+ E
Sbjct:  383 SFALSGLYCTHQDISREYASILLGITNTVGAVPGIVGVALTGYLLDTTHSWSISLFAPSIFFYLTGTAVWLAFASSE 459          
BLAST of DN617768 vs. ExPASy Swiss-Prot
Match: ANTR4_ARATH (Probable anion transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ANTR4 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.029e-12
Identity = 36/99 (36.36%), Postives = 58/99 (58.59%), Query Frame = -2
Query:  359 LSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ-RGSWDDVFKVAVVLYIIGTLVWNLFATGERV 652
            L+  + P +A   ++ + G  +FS  G   N Q+I P Y+GVL G+  TAG LA + GT   G+ ++  GS+     +  +LY++  L +N++ATGERV
Sbjct:  429 LTTAKQPLVASAWLSLAVGLKSFSHLGFLINLQEIAPEYSGVLHGMCLTAGTLAAIVGTVGAGFFVELLGSFQGFILLTAILYLLSALFYNIYATGERV 527          
BLAST of DN617768 vs. ExPASy Swiss-Prot
Match: S17A9_MOUSE (Solute carrier family 17 member 9 OS=Mus musculus GN=Slc17a9 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 2.564e-11
Identity = 36/99 (36.36%), Postives = 56/99 (56.57%), Query Frame = -2
Query:  359 LSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ-RGSWDDVFKVAVVLYIIGTLVWNLFATGERV 652
            L H  +   A++  + S G   F+ SG+  N QD+ P  AG L G++NTAG LAGV G   +GY+++  GSW  VF +  ++  +G   + +F   +RV
Sbjct:  340 LGHTTSFLKAMIFASASIGFQTFNHSGISVNIQDLAPSCAGFLFGVANTAGALAGVVGVCLSGYLIETTGSWTCVFHLVAIISNLGLGTFLVFGKAQRV 438          
BLAST of DN617768 vs. ExPASy Swiss-Prot
Match: S17A9_HUMAN (Solute carrier family 17 member 9 OS=Homo sapiens GN=SLC17A9 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 5.713e-11
Identity = 35/99 (35.35%), Postives = 55/99 (55.56%), Query Frame = -2
Query:  359 LSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ-RGSWDDVFKVAVVLYIIGTLVWNLFATGERV 652
            L H  +   +V+  + S G   F+ SG+  N QD+ P  AG L G++NTAG LAGV G    GY+++  GSW  +F +  ++  +G   + +F   +RV
Sbjct:  329 LGHTSSFCESVVFASASIGLQTFNHSGISVNIQDLAPSCAGFLFGVANTAGALAGVVGVCLGGYLMETTGSWTCLFNLVAIISNLGLCTFLVFGQAQRV 427          
The following BLAST results are available for this feature:
BLAST of DN617768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
ANTR6_ARATH6.103e-1345.45Probable anion transporter 6, chloroplastic OS=Ara... [more]
PHT45_ORYSJ2.319e-1245.45Probable anion transporter 5, chloroplastic OS=Ory... [more]
ANTR4_ARATH3.029e-1236.36Probable anion transporter 4, chloroplastic OS=Ara... [more]
S17A9_MOUSE2.564e-1136.36Solute carrier family 17 member 9 OS=Mus musculus ... [more]
S17A9_HUMAN5.713e-1135.35Solute carrier family 17 member 9 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01K16_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001K16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617768 ID=DN617768; Name=DN617768; organism=Citrus sinensis; type=EST; length=659bp
TTTTTTTAATTAAAGAACATATGGAGGTTTCCTCTTGAAGCATTACATGA
GCTCAGGCGAAGGTTTAATGGGTGCAAATTTCCCATCTCGTTCCCTGGGA
TTGGAAAAATGTATATAGGAAAGAAAAACCTCTAAAAGGGCATTTCAGAA
ACGCAAAAGTTGTAAAAGGGCCTCGCTAATCGGCGAATATCTTCCCTAGT
AGCATCTTAATTTAACCTTGCTTAGCAGGGTTTCATGCCCCAGCATGGAT
GGCATTGTTATCGCCTTTTGATTTTCCTTCAATTTCTTGATGACTTGGTC
TCTTCTTCTTTACTCATTACAGCATCTTCCTCCCATTCTTGCACTTCGTC
TACTCAAGAACTCTCTCTCCCGTTGCAAATAAGTTCCAGACTAAGGTGCC
AATGATGTATAAGACAACAGCTACCTTGAATACATCATCCCAAGAACCTC
GTTGGAGTATGTAACCGGTTGCAGCTGTACCGAAAACACCAGCAAGCACT
CCTGCTGTGTTTGATAGTCCTAAGAGAACTCCAGCATAGCGCGGCCCAAT
ATCTTGATGATTGGAATAAAGACCAGATTGTGAGAATGCATCAGATCCCT
GACTGCATGCCATGCATAGCACTGCCATTGCAGGAGTCCTGACATGGCTC
AGCTGTGTG
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