DN617760

Overview
NameDN617760
Unique NameDN617760
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5749 contig Csv1_Contig5749:1..738. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HFA2B_ORYSJ (Heat stress transcription factor A-2b OS=Oryza sativa subsp. japonica GN=HSFA2B PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.027e-42
Identity = 88/186 (47.31%), Postives = 118/186 (63.44%), Query Frame = 2
Query:    5 TDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQLLQPKENNWRMAEA 562
            TD+ +SW  ++ SFV+WD   F+  LLPR+FKH+NFSSF+RQLN YGFRK+D DRWEFAN+ F+R Q+HLL NI RRK         S QQS   + P  ++ H     E++ LK  K  L  E++KLRQ Q+     L  + DR+QG E+ QQQM++FL   M+NP FL QL+   E    + +A
Sbjct:   66 TDAAVSWSATSNSFVVWDPHAFATVLLPRFFKHNNFSSFVRQLNTYGFRKVDPDRWEFANENFLRGQRHLLKNIKRRK---PPSHTASNQQS---LGPYLEVGHFGYDAEIDRLKRDKQLLMAEVVKLRQEQQNTKANLKAMEDRLQGTEQRQQQMMAFLARVMKNPEFLKQLMSQNEMRKELQDA 245          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HFA2C_ORYSJ (Heat stress transcription factor A-2c OS=Oryza sativa subsp. japonica GN=HSFA2C PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 3.457e-42
Identity = 87/187 (46.52%), Postives = 119/187 (63.64%), Query Frame = 2
Query:    2 STDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQLLQPKENNWRMAEA 562
            +TD ++SW ++  SFV+WD   F+  LLPR FKH+NFSSF+RQLN YGFRK+D DRWEFAN+GF+R Q+HLL  I RRK    S    S QQS   +  C ++      +E++ LK  KN L  E++KLRQ Q+   + +  + DR++  E+ Q QM+ FL  AM+NP F  QL Q KE    + +A
Sbjct:   55 ATDGVVSWSRAGNSFVVWDPHVFADLLLPRLFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQRHLLKTIKRRK--PPSNAPPSQQQS---LTSCLEVGEFGFEEEIDRLKRDKNILITEVVKLRQEQQATKDHVKAMEDRLRAAEQKQVQMMGFLARAMRNPEFFQQLAQQKEKRKELEDA 236          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HFA2E_ORYSJ (Heat stress transcription factor A-2e OS=Oryza sativa subsp. japonica GN=HSFA2E PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.897e-42
Identity = 90/226 (39.82%), Postives = 127/226 (56.19%), Query Frame = 2
Query:    2 STDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQLLQPKE-----------NNWRMAEAGNMLEEVTEVGEPIASDNMLVRYHPPID 646
            +TD+++SW  +N SFV+WD   F   LLPRYFKH+NFSSF+RQLN YGFRK+D D+WEFAN+GF+R QKHLL +I RRK    S  ++SL           ++ H     E++ LK  K+ L  E++KLRQ Q+   + L  +  ++QG E+ QQ M++FL   M NP F+ QL    E              R  + G  L+ +     P     ++   H P+D
Sbjct:   51 TTDAVVSWSATNNSFVVWDPHLFGNVLLPRYFKHNNFSSFVRQLNTYGFRKVDPDKWEFANEGFLRGQKHLLKSIKRRKPPNSSPSQQSLGS-------FLEVGHFGYEGEIDQLKRDKHLLMAEVVKLRQEQQNTKSDLQAMEQKLQGTEQKQQHMMAFLSRVMHNPEFIRQLFSQSEMRKELEEFVSKKRRRRIDQGPELDSMGTGSSPEQVSQVMFEPHDPVD 269          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HFA2D_ORYSJ (Heat stress transcription factor A-2d OS=Oryza sativa subsp. japonica GN=HSFA2D PE=2 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 2.241e-41
Identity = 82/179 (45.81%), Postives = 116/179 (64.80%), Query Frame = 2
Query:    2 STDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQLLQPKE 538
            +TD ++SWG++  SFV+WD   F+   LPR+FKH+NFSSF+RQLN YGFRKID DRWEFANDGF+R Q+HLL  I RR+          L  S++ +  C ++    L +E++ LK  KN L  E++KLR  Q++    +  + +R+Q  E+ Q QM+ FL  AMQNP F  QL+  ++
Sbjct:   50 ATDGVVSWGRAGSSFVVWDPHVFAAVFLPRFFKHNNFSSFVRQLNTYGFRKIDPDRWEFANDGFLRGQRHLLKMIKRRR------PLSYLPGSQQALGTCLEVGQFGLDEEIDRLKRDKNILLAEVVKLRHKQQSTKANMRAMEERLQHAEQKQVQMMGFLARAMQNPDFFHQLIHQQD 222          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HSFA9_ORYSJ (Heat stress transcription factor A-9 OS=Oryza sativa subsp. japonica GN=HSFA9 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.822e-41
Identity = 102/231 (44.16%), Postives = 143/231 (61.90%), Query Frame = 2
Query:    2 STDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNT---QGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQLLQPKE----NNWRMAEAG-----NMLEE--VTEVGEPIASDNMLVRYHPPIDET 652
            +TD++ISW +   SFVIWD   F   L  R+FKHSNF+SFIRQLN YGFRK+  DRWE+AN+GF+  QKHLL  I RRK +     SE +K+  ++    E  E   +  L KEVE LK  K  L Q+L+ LR YQ+T++ ++  L +R+Q ME++QQQM++ L + +QNPSFL QL+Q ++    +NW   +       + LE+  VT+  E       +V Y PP+ ET
Sbjct:   63 ATDNVISWAEGGGSFVIWDSHAFERDL-HRHFKHSNFTSFIRQLNTYGFRKVHPDRWEWANEGFIMGQKHLLKTIKRRKKSSQESPSEIQKAPVKTAPGTENIEIGKYGGLEKEVETLKRDKALLMQQLVDLRHYQQTSNLEVQNLIERLQVMEQNQQQMMALLAIVVQNPSFLNQLVQQQQQQRRSNWWSPDGSKKRRFHALEQGPVTD-QETSGRGAHIVEYLPPVPET 291          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HSFA2_ARATH (Heat stress transcription factor A-2 OS=Arabidopsis thaliana GN=HSFA2 PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.452e-40
Identity = 85/175 (48.57%), Postives = 112/175 (64.00%), Query Frame = 2
Query:    2 STDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKN--TQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQ 520
            +TD+++SW     SFV+WD  +FS  LLPRYFKHSNFSSFIRQLN YGFRKID DRWEFAN+GF+  QKHLL NI RR+N   Q   Q+ S          C ++       EVE LK     L  E+++LRQ Q ++ +++  +  R+   EK QQQM++FL  A+ NP+F+ Q
Sbjct:   57 ATDTVVSWSNGRNSFVVWDSHKFSTTLLPRYFKHSNFSSFIRQLNTYGFRKIDPDRWEFANEGFLAGQKHLLKNIKRRRNMGLQNVNQQGSGMS-------CVEVGQYGFDGEVERLKRDHGVLVAEVVRLRQQQHSSKSQVAAMEQRLLVTEKRQQQMMTFLAKALNNPNFVQQ 224          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HFA2A_ORYSJ (Heat stress transcription factor A-2a OS=Oryza sativa subsp. japonica GN=HSFA2A PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.230e-39
Identity = 82/179 (45.81%), Postives = 110/179 (61.45%), Query Frame = 2
Query:    5 TDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRK-----NTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQLL 526
            TD++ISWG +  SFV+WD   F+  LLPRYFKHSNFSSF+RQLN YGFRK+D DRWEFAN+GF+R +K LL  I RR+         S    S Q  ++    C ++        V  L+  K+ L  E++KLRQ Q+T   ++  + +R+   E+ QQQM  FL  AM+NP FL  L+
Sbjct:   67 TDTVISWGFAGNSFVVWDANAFAAVLLPRYFKHSNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGKKELLKTIKRRRPPPSSPPSSSSSSSSSQHQQQPAAACLEVGQFGRDGVVNRLQRDKSVLIAEVVKLRQEQQTTRAQMQAMEERISAAEQKQQQMTVFLARAMKNPGFLQMLV 245          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HSFA9_ARATH (Heat stress transcription factor A-9 OS=Arabidopsis thaliana GN=HSFA9 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.151e-37
Identity = 82/208 (39.42%), Postives = 129/208 (62.02%), Query Frame = 2
Query:    5 TDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRR-KNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQLLQPKENN-WRMAEAGNMLEEVTEVGEPIASDNML 622
            TD ++SW  + +SF+IWD  EFS  LLP+YFKH NFSSFIRQLN YGF+K+D+DRWEFAN+GF   +KHLL NI RR KNT+   +  S   +E                EVE+LK  ++ +  E+LKL+Q QE + ++++ +++++ G++  QQ MLSF     ++  F+ +L++ ++    R  EA   ++++  + +     N+L
Sbjct:   85 TDPVVSWSPTRKSFIIWDSYEFSENLLPKYFKHKNFSSFIRQLNSYGFKKVDSDRWEFANEGFQGGKKHLLKNIKRRSKNTKCCNKEASTTTTE---------------TEVESLKEEQSPMRLEMLKLKQQQEESQHQMVTVQEKIHGVDTEQQHMLSFFAKLAKDQRFVERLVKKRKMKIQRELEAAEFVKKLKLLQDQETQKNLL 277          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HFA7A_ARATH (Heat stress transcription factor A-7a OS=Arabidopsis thaliana GN=HSFA7A PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.564e-37
Identity = 82/186 (44.09%), Postives = 110/186 (59.14%), Query Frame = 2
Query:    2 STDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQLLQPKENNWRMAE 559
            +TD I+SW +   SFV+WD+  FS  LLPR+FKHSNFSSFIRQLN YGFRKI+ +RWEFAN+ F+  Q+ LL NI RR                    P     H A       L+  K  L  E++ LRQ Q+T  + +  +  R++G E+ Q+QM+SFL  AMQ+PSFL QLL+ ++   +  E
Sbjct:   42 NTDHIVSWNRGGTSFVVWDLHSFSTILLPRHFKHSNFSSFIRQLNTYGFRKIEAERWEFANEEFLLGQRQLLKNIKRRNP----------------FTPSSSPSHDA----CNELRREKQVLMMEIVSLRQQQQTTKSYIKAMEQRIEGTERKQRQMMSFLARAMQSPSFLHQLLKQRDKKIKELE 207          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HFA4A_ARATH (Heat stress transcription factor A-4a OS=Arabidopsis thaliana GN=HSFA4A PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.711e-37
Identity = 78/174 (44.83%), Postives = 110/174 (63.22%), Query Frame = 2
Query:    2 STDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQL 523
            S+DSI+SW QSN+SF++W+  EFS  LLPR+FKH+NFSSFIRQLN YGFRK D ++WEFAND FVR Q HL+ NI RRK         SL   +  + P    +   +  ++E L   K  L +EL K  + +E  + ++  L++R+Q MEK Q+ M+SF+   ++ P   + L
Sbjct:   28 SSDSIVSWSQSNKSFIVWNPPEFSRDLLPRFFKHNNFSSFIRQLNTYGFRKADPEQWEFANDDFVRGQPHLMKNIHRRKPVHS----HSLPNLQAQLNPLTDSERVRMNNQIERLTKEKEGLLEELHKQDEEREVFEMQVKELKERLQHMEKRQKTMVSFVSQVLEKPGLALNL 197          
The following BLAST results are available for this feature:
BLAST of DN617760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
HFA2B_ORYSJ2.027e-4247.31Heat stress transcription factor A-2b OS=Oryza sat... [more]
HFA2C_ORYSJ3.457e-4246.52Heat stress transcription factor A-2c OS=Oryza sat... [more]
HFA2E_ORYSJ5.897e-4239.82Heat stress transcription factor A-2e OS=Oryza sat... [more]
HFA2D_ORYSJ2.241e-4145.81Heat stress transcription factor A-2d OS=Oryza sat... [more]
HSFA9_ORYSJ3.822e-4144.16Heat stress transcription factor A-9 OS=Oryza sati... [more]
HSFA2_ARATH1.452e-4048.57Heat stress transcription factor A-2 OS=Arabidopsi... [more]
HFA2A_ORYSJ1.230e-3945.81Heat stress transcription factor A-2a OS=Oryza sat... [more]
HSFA9_ARATH1.151e-3739.42Heat stress transcription factor A-9 OS=Arabidopsi... [more]
HFA7A_ARATH2.564e-3744.09Heat stress transcription factor A-7a OS=Arabidops... [more]
HFA4A_ARATH5.711e-3744.83Heat stress transcription factor A-4a OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01K11_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001K11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617760 ID=DN617760; Name=DN617760; organism=Citrus sinensis; type=EST; length=738bp
GTCAACCGACTCGATAATCTCTTGGGGTCAAAGCAATGAGAGTTTTGTCA
TATGGGATGTGACTGAGTTTTCAGTTCAGTTGTTGCCTAGGTACTTCAAG
CACAGTAACTTCTCCAGCTTCATCAGGCAACTCAATATCTATGGGTTTAG
AAAAATTGACACAGACCGTTGGGAATTTGCAAATGATGGATTCGTTAGAG
ATCAGAAGCATTTGTTGAACAATATTTGTAGAAGGAAAAATACTCAAGGG
TCTGAGCAGCGAAAATCATTGCAGCAGTCAGAAAAGTTGGTTGAACCATG
TGAGAAAATTGACCATTCGGCACTGTGGAAGGAAGTTGAGAATTTGAAGG
CTGGTAAAAATGCACTTACACAGGAGTTGCTGAAACTTAGGCAGTACCAG
GAGACTGCAGATAATAAGTTGCTTCTCTTGAGGGACCGTGTTCAAGGAAT
GGAAAAAAGCCAGCAGCAGATGTTGTCATTCTTAGTGATGGCCATGCAAA
ATCCAAGTTTTTTGGTTCAGCTACTTCAACCAAAAGAAAATAACTGGCGC
ATGGCTGAAGCAGGCAATATGCTCGAAGAAGTTACAGAGGTTGGTGAACC
AATAGCTTCTGATAATATGTTAGTAAGATATCACCCACCAATAGATGAAA
CACCGAAGCCTGTTCTCAAACCAGTGACAGATTCANGAAACCAAATGGCA
TCTGATACTTCTGACGGCATGAAAGACGTATTCATGAA
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