DN617760

Overview
NameDN617760
Unique NameDN617760
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5749 contig Csv1_Contig5749:1..738. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HSFA5_ARATH (Heat stress transcription factor A-5 OS=Arabidopsis thaliana GN=HSFA5 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.835e-36
Identity = 75/171 (43.86%), Postives = 108/171 (63.16%), Query Frame = 2
Query:    2 STDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFL 514
            STD I+SW  +N SF++W+  EFS  LLP YFKH+NFSSFIRQLN YGFRKID +RWEF ND F++DQKHLL NI RRK         +    +         + + L ++++ L   K A+  +LLK +Q +  A ++   + + V  ME  Q+++L+FL  A++NP+F+
Sbjct:   36 STDQIVSWSANNNSFIVWNHAEFSRLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFLNDDFIKDQKHLLKNIHRRKPIHSHSHPPASSTDQ---------ERAVLQEQMDKLSREKAAIEAKLLKFKQQKVVAKHQFEEMTEHVDDMENRQKKLLNFLETAIRNPTFV 197          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HSFA5_ORYSJ (Heat stress transcription factor A-5 OS=Oryza sativa subsp. japonica GN=HSFA5 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.315e-36
Identity = 84/191 (43.98%), Postives = 119/191 (62.30%), Query Frame = 2
Query:    2 STDSIISWGQSNE-SFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNTQG-SEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQLLQPKENNWRMAEAGN 568
            STD+++SW  +++ SFV+W+  EF+ +LLP YFKHSNFSSFIRQLN YGFRKID +RWEFAN+ F++ QKHLL NI RRK     S    +L  +E+ +             E+E L   K+ L  +L K +Q Q    N++  L  RV GME+ Q +M++FL  A +NP F+ +L++  E +    +A N
Sbjct:   34 STDAVVSWSDASDASFVVWNHPEFAARLLPAYFKHSNFSSFIRQLNTYGFRKIDPERWEFANEYFIKGQKHLLKNIHRRKPIHSHSHPPGALPDNERAI----------FEDEIERLSREKSNLQADLWKSKQQQSGTMNQIEDLERRVLGMEQRQTKMIAFLQQASKNPQFVNKLVKMAEASSIFTDAFN 214          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HSFA3_ARATH (Heat stress transcription factor A-3 OS=Arabidopsis thaliana GN=HSFA3 PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.407e-35
Identity = 82/189 (43.39%), Postives = 115/189 (60.85%), Query Frame = 2
Query:    8 DSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQLLQPKENNWRMAEAGNML 574
            D +ISWG +  SFV+WD  EF+  +LPR FKH+NFSSF+RQLN YGFRKIDTD+WEFAN+ F+R +KHLL NI RR++ Q S Q      S+    P E      +  E+E L+  + AL +E+++L+Q        +  +  R++  E+ Q+Q+LSFL    QN  FL +L      N++  E G  L
Sbjct:   70 DPVISWGLTGASFVVWDPLEFARIILPRNFKHNNFSSFVRQLNTYGFRKIDTDKWEFANEAFLRGKKHLLKNIHRRRSPQ-SNQTCCSSTSQSQGSPTE------VGGEIEKLRKERRALMEEMVELQQQSRGTARHVDTVNQRLKAAEQRQKQLLSFLAKLFQNRGFLERL-----KNFKGKEKGGAL 246          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HSFA3_ORYSJ (Heat stress transcription factor A-3 OS=Oryza sativa subsp. japonica GN=HSFA3 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.118e-35
Identity = 75/172 (43.60%), Postives = 106/172 (61.63%), Query Frame = 2
Query:    8 DSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQL 523
            D +ISWG +  SFV+WD + F+  +LP +FKH+NFSSF+RQLN YGFRK+  DRWEFA++ F+R  KHLL  I RR+++    Q+  LQ              S L  E+  L+  K+AL QE+ +L+Q       ++  L  R++  E  Q+QM+SFL   +QNP+FL QL
Sbjct:   82 DGVISWGHAGNSFVVWDPSAFARDVLPHHFKHNNFSSFVRQLNTYGFRKVHADRWEFAHEDFLRHSKHLLKKIVRRRSS--PTQQSGLQPGSS--------GESGLDPELNTLRREKSALLQEVTRLKQEHLQTIEQMSTLNQRLESAEDRQKQMVSFLAKLLQNPTFLRQL 243          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HFA6A_ARATH (Heat stress transcription factor A-6a OS=Arabidopsis thaliana GN=HSFA6A PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.910e-34
Identity = 73/174 (41.95%), Postives = 111/174 (63.79%), Query Frame = 2
Query:    2 STDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQL 523
            ST++I+SW + N SF++W+   F++  LPR FKH+NFSSF+RQLN YGF+KIDT+RWEFAN+ F++ ++HLL NI RRK T    Q +SL+                   E+  L+  + AL  EL++LR+ QE+    L L+ ++++  E  Q+ M++FL+  ++ PSFL  L
Sbjct:   32 STNNIVSWSRDNNSFIVWEPETFALICLPRCFKHNNFSSFVRQLNTYGFKKIDTERWEFANEHFLKGERHLLKNIKRRK-TSSQTQTQSLE------------------GEIHELRRDRMALEVELVRLRRKQESVKTYLHLMEEKLKVTEVKQEMMMNFLLKKIKKPSFLQSL 186          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HFA7B_ARATH (Heat stress transcription factor A-7b OS=Arabidopsis thaliana GN=HSFA7B PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.719e-34
Identity = 78/203 (38.42%), Postives = 117/203 (57.64%), Query Frame = 2
Query:    2 STDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQLLQPKENNWRMA---EAGNM-LEEVTEVGE 598
            +T+ I+SW +   SFV+WD   FS  +LP YFKH+NFSSF+RQLN YGFRKI+ +RWEF N+GF+  Q+ LL +I RR ++         Q   +  +P           E+  L+  ++ L  E+  LRQ ++ A   +  +  R+ G EK Q+ M+SFL  A++NPS L Q+ + K +    A   +AG + +EEV  + E
Sbjct:   41 NTNHIVSWNRGGISFVVWDPHSFSATILPLYFKHNNFSSFVRQLNTYGFRKIEAERWEFMNEGFLMGQRDLLKSIKRRTSSSSPPSLNYSQSQPEAHDP---------GVELPQLREERHVLMMEISTLRQEEQRARGYVQAMEQRINGAEKKQRHMMSFLRRAVENPSLLQQIFEQKRDREEAAMIDQAGLIKMEEVEHLSE 234          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HSFC1_ARATH (Heat stress transcription factor C-1 OS=Arabidopsis thaliana GN=HSFC1 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.115e-32
Identity = 70/179 (39.11%), Postives = 108/179 (60.34%), Query Frame = 2
Query:    2 STDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQLLQPKE 538
            STD +I+WG ++ SF++ D  +FS ++LP YFKH+NFSSF+RQLN YGFRK+D DRWEFAN+ F+R QKHLLNNI RRK+ +G                 + ++   + +E+E LK  +  L  E+ ++ +              R++  EK  +QM++FL   +++P  L +++  KE
Sbjct:   30 STDWLITWGPAHNSFIVVDPLDFSQRILPAYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEHFLRGQKHLLNNIARRKHARGMYG--------------QDLEDGEIVREIERLKEEQRELEAEIQRMNR--------------RIEATEKRPEQMMAFLYKVVEDPDLLPRMMLEKE 180          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HFA6B_ORYSJ (Heat stress transcription factor A-6a OS=Oryza sativa subsp. japonica GN=HSFA6B PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.901e-32
Identity = 72/177 (40.68%), Postives = 107/177 (60.45%), Query Frame = 2
Query:    2 STDSIISWGQ--SNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQLL 526
            +TD+++SWG   S  SFV+WD    +  +LPR+FKH+NFSSF+RQLN YGFRK+  DRWEFAN+ F+  QKHLL NI RR+ +      K L  S+   +            EV +LK  + AL  E++ L+Q      ++L+ + + V+ +E+ QQQ + F    + NP+F+ Q+L
Sbjct:  106 ATDAVVSWGPGGSGASFVVWDPHALAAGVLPRFFKHANFSSFVRQLNTYGFRKVTPDRWEFANEAFLAGQKHLLKNIKRRRVS------KPLVDSQLRNKASVVFGQPEAPGEVVSLKRDRAALRAEVIMLKQQYNACKSQLIAMEEMVRNIERRQQQTIGFFAKVLTNPAFVQQVL 276          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HFA6A_ORYSJ (Putative heat stress transcription factor A-6a OS=Oryza sativa subsp. japonica GN=HSFA6A PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.236e-32
Identity = 74/172 (43.02%), Postives = 103/172 (59.88%), Query Frame = 2
Query:    2 STDSIISWG-QSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFL 514
            +TD+++SWG  +  SFV+WD   F+  LLP +FKH+NFSSF+RQLN YGFRK+  DRWEFAN+ F+  Q+HLL NI RR+   G         +                 EVE L+  K AL +EL +LR+ Q+ A  +LL +  RV+G E+ Q+Q   FL  A+++P  L
Sbjct:   56 ATDAVVSWGGAARNSFVVWDPHAFAAGLLPLHFKHANFSSFLRQLNTYGFRKVSADRWEFANEDFLGGQRHLLANIRRRRRGAG---------TGSTTPRAVNCGGGGGEGEVERLRRDKEALARELARLRRQQQEARAQLLDMERRVRGTERRQEQCTEFLARALRSPDVL 218          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HFA4C_ARATH (Heat stress transcription factor A-4c OS=Arabidopsis thaliana GN=HSFA4C PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.436e-32
Identity = 71/186 (38.17%), Postives = 111/186 (59.68%), Query Frame = 2
Query:    2 STDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKIDTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQLLQPKENNWRMAE 559
            S+DS+++W ++N+SF++ +  EFS  LLPR+FKH NFSSFIRQLN YGFRK+D ++WEF ND FVR + +L+ NI RRK    S    +LQ    L E     +  ++  ++E LK  K  L  EL    Q ++  + ++  L+DR+Q ME+ Q+ +++++   +  P   + L   +    R  E
Sbjct:   26 SSDSVVAWSENNKSFIVKNPAEFSRDLLPRFFKHKNFSSFIRQLNTYGFRKVDPEKWEFLNDDFVRGRPYLMKNIHRRKPVH-SHSLVNLQAQNPLTES----ERRSMEDQIERLKNEKEGLLAELQNQEQERKEFELQVTTLKDRLQHMEQHQKSIVAYVSQVLGKPGLSLNLENHERRKRRFQE 206          
The following BLAST results are available for this feature:
BLAST of DN617760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
HSFA5_ARATH2.835e-3643.86Heat stress transcription factor A-5 OS=Arabidopsi... [more]
HSFA5_ORYSJ6.315e-3643.98Heat stress transcription factor A-5 OS=Oryza sati... [more]
HSFA3_ARATH1.407e-3543.39Heat stress transcription factor A-3 OS=Arabidopsi... [more]
HSFA3_ORYSJ9.118e-3543.60Heat stress transcription factor A-3 OS=Oryza sati... [more]
HFA6A_ARATH5.910e-3441.95Heat stress transcription factor A-6a OS=Arabidops... [more]
HFA7B_ARATH7.719e-3438.42Heat stress transcription factor A-7b OS=Arabidops... [more]
HSFC1_ARATH1.115e-3239.11Heat stress transcription factor C-1 OS=Arabidopsi... [more]
HFA6B_ORYSJ1.901e-3240.68Heat stress transcription factor A-6a OS=Oryza sat... [more]
HFA6A_ORYSJ4.236e-3243.02Putative heat stress transcription factor A-6a OS=... [more]
HFA4C_ARATH9.436e-3238.17Heat stress transcription factor A-4c OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01K11_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001K11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617760 ID=DN617760; Name=DN617760; organism=Citrus sinensis; type=EST; length=738bp
GTCAACCGACTCGATAATCTCTTGGGGTCAAAGCAATGAGAGTTTTGTCA
TATGGGATGTGACTGAGTTTTCAGTTCAGTTGTTGCCTAGGTACTTCAAG
CACAGTAACTTCTCCAGCTTCATCAGGCAACTCAATATCTATGGGTTTAG
AAAAATTGACACAGACCGTTGGGAATTTGCAAATGATGGATTCGTTAGAG
ATCAGAAGCATTTGTTGAACAATATTTGTAGAAGGAAAAATACTCAAGGG
TCTGAGCAGCGAAAATCATTGCAGCAGTCAGAAAAGTTGGTTGAACCATG
TGAGAAAATTGACCATTCGGCACTGTGGAAGGAAGTTGAGAATTTGAAGG
CTGGTAAAAATGCACTTACACAGGAGTTGCTGAAACTTAGGCAGTACCAG
GAGACTGCAGATAATAAGTTGCTTCTCTTGAGGGACCGTGTTCAAGGAAT
GGAAAAAAGCCAGCAGCAGATGTTGTCATTCTTAGTGATGGCCATGCAAA
ATCCAAGTTTTTTGGTTCAGCTACTTCAACCAAAAGAAAATAACTGGCGC
ATGGCTGAAGCAGGCAATATGCTCGAAGAAGTTACAGAGGTTGGTGAACC
AATAGCTTCTGATAATATGTTAGTAAGATATCACCCACCAATAGATGAAA
CACCGAAGCCTGTTCTCAAACCAGTGACAGATTCANGAAACCAAATGGCA
TCTGATACTTCTGACGGCATGAAAGACGTATTCATGAA
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