DN617760

Overview
NameDN617760
Unique NameDN617760
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5749 contig Csv1_Contig5749:1..738. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HSF_YEAST (Heat shock factor protein OS=Saccharomyces cerevisiae GN=HSF1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.082e-19
Identity = 72/301 (23.92%), Postives = 137/301 (45.51%), Query Frame = 2
Query:    2 STDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKI-----------DTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKS-------------------------------------LQQSEKL-----VEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFL--VMAMQNPSFLVQ-LLQPKENNWRMAEAGNM---LEEVTEVGEPIASDNMLVRYHPPIDETPKPVLKPVTDSXNQMASDTSDGMKD 727
            S   +I W +  +SF++ +  EF  Q+LP+YFKHSNF+SF+RQLN+YG+ K+             D+W+F N+ F+R ++ LL  I R+K +  +    S                                     L Q + L         +K D +A+  E+E +K  + A++++LL++ +  E    + ++ R+R +  +++ ++M  FL  ++   +P  ++  L  PK NN ++  A N+    +    + E  ++D+        I++         T++ N M+ +  D   D
Sbjct:  187 SNTKLIQWAEDGKSFIVTNREEFVHQILPKYFKHSNFASFVRQLNMYGWHKVQDVKSGSIQSSSDDKWQFENENFIRGREDLLEKIIRQKGSSNNHNSPSGNGNPANGSNIPLDNAAGSNNSNNNISSSNSFFNNGHLLQGKTLRLMNEANLGDKNDVTAILGELEQIKYNQIAISKDLLRINKDNELLWQENMMARERHRTQQQALEKMFRFLTSIVPHLDPKMIMDGLGDPKVNNEKLNSANNIGLNRDNTGTIDELKSNDSF-------INDDRNSFTNATTNARNNMSPNNDDNSID 480          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HSF_XENLA (Heat shock factor protein OS=Xenopus laevis GN=hsf1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.413e-19
Identity = 79/284 (27.82%), Postives = 135/284 (47.54%), Query Frame = 2
Query:    5 TDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKI-----------DTDRWEFANDGFVRDQKHLLNNICRRKNTQG---SEQRKSLQQS-EKLVEPCE----------------KIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQLL---QPKENNWRM-----AEAGNMLEEVTEVGEPIASDNMLVRYHPPIDETPKPVL----KPVTDSXNQMASDTSDGMKD 727
            TD +I W     SF ++D  +F+ ++LP+YFKH+N +SF+RQLN+YGFRK+           + D  EF +  F+R Q+ LL NI R+ NT     S++ K  Q S  KL+   +                K ++ ALW+EV +L+       + + KL Q+  +     L+  +R+ G+++    ML+        P +  Q      P   ++ +     + AG ++ +VTE+ E   S +      P ++ +P PV+    +P+T S +   S     + D
Sbjct:   28 TDPLICWSPEGNSFHVFDQGQFAKEVLPKYFKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPYFIRGQEQLLENIKRKVNTMSATKSDEVKVRQDSVGKLISDVQSMKGKQESIDGRLLSMKHENEALWREVASLRQKHTQQQKVVNKLIQFLVS-----LVQSNRILGVKRKIPLMLNDSSTGHSPPKYSRQYSLEHVPSSTSYPVSGFTDSSAGPIISDVTELPESSPSPSPC----PSLEASPSPVILIKTEPLTPSQSPEQSPAPPKLDD 302          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HSF1_CHICK (Heat shock factor protein 1 OS=Gallus gallus GN=HSF1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.411e-19
Identity = 52/181 (28.73%), Postives = 98/181 (54.14%), Query Frame = 2
Query:    5 TDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKI-----------DTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFL 514
            TD +I W  S  SF ++D  +F+ ++LP+YFKH+N +SF+RQLN+YGFRK+           + D  EF +  F+R Q+HLL NI R+  +  S + + ++  +  V        + L  +++ +K  + ++  +L+ ++   E    ++  LR +    +K   +++ FL+  +Q+   L
Sbjct:   36 TDPLICWSPSGNSFHVFDQGQFAKEVLPKYFKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPEKDDTEFQHPYFIRGQEHLLENIKRKVTSVSSIKNEDIKVRQDNV--------TKLLTDIQVMKGKQESMDSKLIAMKHENEALWREVASLRQKHAQQQKVVNKLIQFLISLVQSNRIL 208          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HSF_KLULA (Heat shock factor protein OS=Kluyveromyces lactis GN=HSF PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.014e-19
Identity = 55/175 (31.43%), Postives = 92/175 (52.57%), Query Frame = 2
Query:    2 STDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKI-----------DTDRWEFANDGFVRDQKHLLNNICRRK---NTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFL 484
            S +  I W  S ES V+ +   F  ++LP+YFKHSNF+SF+RQLN+YG+ K+           +  RWEF N+ F R +++LL NI R+K   N  G                  ++D   L  E+E +K  + A+ ++L ++ +  E    + ++ R+R Q  ++  +++L FL
Sbjct:  209 SNEKFIHWSTSGESIVVPNRERFVQEVLPKYFKHSNFASFVRQLNMYGWHKVQDVKSGSMLSNNDSRWEFENENFKRGKEYLLENIVRQKSNTNILGGTTN-------------AEVDIHILLNELETVKYNQLAIAEDLKRITKDNEMLWKENMMARERHQSQQQVLEKLLRFL 370          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HSF1_BOVIN (Heat shock factor protein 1 OS=Bos taurus GN=HSF1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.665e-18
Identity = 53/181 (29.28%), Postives = 97/181 (53.59%), Query Frame = 2
Query:    5 TDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKI-----------DTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFL 514
            TD++I W  S  SF + D  +F+ ++LP+YFKHSN +SF+RQLN+YGFRK+           + D  EF +  F+R Q+ LL NI R+  +  + + + ++  +  V        + L  +V+ +K  + ++  +LL ++   E    ++  LR +    +K   +++ FL+  +Q+   L
Sbjct:   31 TDALICWSPSGNSFHVLDQGQFAKEVLPKYFKHSNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRKVTSVSTLRSEDIKIRQDSV--------TKLLTDVQLMKGKQESMDSKLLAMKHENEALWREVASLRQKHAQQQKVVNKLIQFLISLVQSNRIL 203          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HSF1_MOUSE (Heat shock factor protein 1 OS=Mus musculus GN=Hsf1 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.481e-18
Identity = 52/181 (28.73%), Postives = 97/181 (53.59%), Query Frame = 2
Query:    5 TDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKI-----------DTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFL 514
            TD++I W  S  SF ++D  +F+ ++LP+YFKH+N +SF+RQLN+YGFRK+           + D  EF +  F+R Q+ LL NI R+  +  + + + ++  +  V        + L  +V+ +K  +  +  +LL ++   E    ++  LR +    +K   +++ FL+  +Q+   L
Sbjct:   31 TDALICWSPSGNSFHVFDQGQFAKEVLPKYFKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRKVTSVSTLKSEDIKIRQDSV--------TRLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQKHAQQQKVVNKLIQFLISLVQSNRIL 203          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HSF1_HUMAN (Heat shock factor protein 1 OS=Homo sapiens GN=HSF1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.481e-18
Identity = 52/181 (28.73%), Postives = 97/181 (53.59%), Query Frame = 2
Query:    5 TDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKI-----------DTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFL 514
            TD++I W  S  SF ++D  +F+ ++LP+YFKH+N +SF+RQLN+YGFRK+           + D  EF +  F+R Q+ LL NI R+  +  + + + ++  +  V        + L  +V+ +K  +  +  +LL ++   E    ++  LR +    +K   +++ FL+  +Q+   L
Sbjct:   31 TDALICWSPSGNSFHVFDQGQFAKEVLPKYFKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRKVTSVSTLKSEDIKIRQDSV--------TKLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQKHAQQQKVVNKLIQFLISLVQSNRIL 203          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HSF_SCHPO (Heat shock factor protein OS=Schizosaccharomyces pombe GN=hsf1 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.323e-17
Identity = 58/178 (32.58%), Postives = 94/178 (52.81%), Query Frame = 2
Query:    2 STDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKI------------DTDRWEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLR-----QYQETADNKLLLLRDRVQGMEKSQQQMLSFL 484
            STDS+I W    +SF++    +F+  +LPRYFKH+NFSSF+RQLN+YGF K+              +  EFAN  F RDQ  LL  + R+K             S+ + E    +D S +  E++N++  +  L+ EL +++      +QE  +N     R+R +  +++  ++L FL
Sbjct:   65 STDSLIRWSDRGDSFLVIGHEDFAKLVLPRYFKHNNFSSFVRQLNMYGFHKVPHIQQGVLQSDSPNELLEFANPNFQRDQPELLCLVTRKK-----------AGSQPVEESNTSLDMSTISSELQNIRIQQMNLSNELSRIQVDNAALWQENMEN-----RERQRRHQETIDKILRFL 226          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HSF2_MOUSE (Heat shock factor protein 2 OS=Mus musculus GN=Hsf2 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.565e-17
Identity = 56/173 (32.37%), Postives = 93/173 (53.76%), Query Frame = 2
Query:    5 TDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRK--------IDTDR---WEFANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQS-EKLVEPCEKI----------------DHSALWKEVENLKAGKNALTQELLKLRQYQET--ADNKLLLLR 433
            T+  I+W Q+ +SF++ D   F+ ++LP+YFKH+N +SF+RQLN+YGFRK        I  +R    EF +  F + Q  LL NI R+ ++   E+ K  Q+   K++   +K+                ++ +LWKEV  L+A      Q + K+ Q+  T   +N+L+ L+
Sbjct:   23 TNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMASFVRQLNMYGFRKVVHIESGIIKQERDGPVEFQHPYFKQGQDDLLENIKRKVSSSKPEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQVIRKIVQFIVTLVQNNQLVSLK 195          
BLAST of DN617760 vs. ExPASy Swiss-Prot
Match: HSF2_HUMAN (Heat shock factor protein 2 OS=Homo sapiens GN=HSF2 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.565e-17
Identity = 56/173 (32.37%), Postives = 93/173 (53.76%), Query Frame = 2
Query:    5 TDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRK---IDTDRWEFANDG--------FVRDQKHLLNNICRRKNTQGSEQRKSLQQS-EKLVEPCEKI----------------DHSALWKEVENLKAGKNALTQELLKLRQYQET--ADNKLLLLR 433
            T+  I+W Q+ +SF++ D   F+ ++LP+YFKH+N +SF+RQLN+YGFRK   ID+   +   DG        F + Q  LL NI R+ ++   E+ K  Q+   K++   +K+                ++ +LWKEV  L+A      Q + K+ Q+  T   +N+L+ L+
Sbjct:   23 TNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMASFVRQLNMYGFRKVVHIDSGIVKQERDGPVEFQHPYFKQGQDDLLENIKRKVSSSKPEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQVIRKIVQFIVTLVQNNQLVSLK 195          
The following BLAST results are available for this feature:
BLAST of DN617760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
HSF_YEAST1.082e-1923.92Heat shock factor protein OS=Saccharomyces cerevis... [more]
HSF_XENLA1.413e-1927.82Heat shock factor protein OS=Xenopus laevis GN=hsf... [more]
HSF1_CHICK2.411e-1928.73Heat shock factor protein 1 OS=Gallus gallus GN=HS... [more]
HSF_KLULA7.014e-1931.43Heat shock factor protein OS=Kluyveromyces lactis ... [more]
HSF1_BOVIN2.665e-1829.28Heat shock factor protein 1 OS=Bos taurus GN=HSF1 ... [more]
HSF1_MOUSE3.481e-1828.73Heat shock factor protein 1 OS=Mus musculus GN=Hsf... [more]
HSF1_HUMAN3.481e-1828.73Heat shock factor protein 1 OS=Homo sapiens GN=HSF... [more]
HSF_SCHPO1.323e-1732.58Heat shock factor protein OS=Schizosaccharomyces p... [more]
HSF2_MOUSE6.565e-1732.37Heat shock factor protein 2 OS=Mus musculus GN=Hsf... [more]
HSF2_HUMAN6.565e-1732.37Heat shock factor protein 2 OS=Homo sapiens GN=HSF... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01K11_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001K11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617760 ID=DN617760; Name=DN617760; organism=Citrus sinensis; type=EST; length=738bp
GTCAACCGACTCGATAATCTCTTGGGGTCAAAGCAATGAGAGTTTTGTCA
TATGGGATGTGACTGAGTTTTCAGTTCAGTTGTTGCCTAGGTACTTCAAG
CACAGTAACTTCTCCAGCTTCATCAGGCAACTCAATATCTATGGGTTTAG
AAAAATTGACACAGACCGTTGGGAATTTGCAAATGATGGATTCGTTAGAG
ATCAGAAGCATTTGTTGAACAATATTTGTAGAAGGAAAAATACTCAAGGG
TCTGAGCAGCGAAAATCATTGCAGCAGTCAGAAAAGTTGGTTGAACCATG
TGAGAAAATTGACCATTCGGCACTGTGGAAGGAAGTTGAGAATTTGAAGG
CTGGTAAAAATGCACTTACACAGGAGTTGCTGAAACTTAGGCAGTACCAG
GAGACTGCAGATAATAAGTTGCTTCTCTTGAGGGACCGTGTTCAAGGAAT
GGAAAAAAGCCAGCAGCAGATGTTGTCATTCTTAGTGATGGCCATGCAAA
ATCCAAGTTTTTTGGTTCAGCTACTTCAACCAAAAGAAAATAACTGGCGC
ATGGCTGAAGCAGGCAATATGCTCGAAGAAGTTACAGAGGTTGGTGAACC
AATAGCTTCTGATAATATGTTAGTAAGATATCACCCACCAATAGATGAAA
CACCGAAGCCTGTTCTCAAACCAGTGACAGATTCANGAAACCAAATGGCA
TCTGATACTTCTGACGGCATGAAAGACGTATTCATGAA
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