DN617758

Overview
NameDN617758
Unique NameDN617758
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5818 contig Csv1_Contig5818:17..712. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DN617758 vs. ExPASy Swiss-Prot
Match: VATL_TORMA (V-type proton ATPase 16 kDa proteolipid subunit OS=Torpedo marmorata PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.586e-30
Identity = 72/135 (53.33%), Postives = 89/135 (65.93%), Query Frame = -3 
Query:  260 VFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSR 664
            VFS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+   N   +   LF  +                G AIGIVGDAGVR  AQQP+LFVGM           LYGLIV +ILS++
Sbjct:   23 VFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA---NSLTEDISLFKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK 154
[Close]
BLAST of DN617758 vs. ExPASy Swiss-Prot
Match: VATL_ASCSU (V-type proton ATPase 16 kDa proteolipid subunit OS=Ascaris suum GN=12 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.586e-30
Identity = 66/134 (49.25%), Postives = 89/134 (66.42%), Query Frame = -3 
Query:  263 VFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSS 664
            +F+ +GAAYGTAKS VG++SMGVMRPEL+MKS++PV+MAG++GIYGL++A+++   +   +  Y L  G+                G AIGIVGDAGVR  AQQP+LFVGM           LYG+IV +IL +
Sbjct:   27 IFTVLGAAYGTAKSAVGISSMGVMRPELIMKSVIPVIMAGIIGIYGLVVAMVLRGKVTSASAGYTLDKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALILGT 160
[Close]
BLAST of DN617758 vs. ExPASy Swiss-Prot
Match: VATL_NEPNO (V-type proton ATPase 16 kDa proteolipid subunit OS=Nephrops norvegicus PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.684e-30
Identity = 71/135 (52.59%), Postives = 91/135 (67.41%), Query Frame = -3 
Query:  260 VFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSR 664
            VFS +GAAYGTAKSGVG+++M VMRPEL+MK I+PVVMAG++ IYGL++AV+I+ G   +A +Y L+ G+                G AIGIVGDAGVR  AQQP+L+VGM           LYGLIV I L ++
Sbjct:   23 VFSALGAAYGTAKSGVGISAMSVMRPELIMKCIIPVVMAGIIAIYGLVVAVLIA-GKLDEAPTYTLYQGFVHMGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLYVGMILILIFAEVLGLYGLIVAIFLYTK 156
[Close]
BLAST of DN617758 vs. ExPASy Swiss-Prot
Match: VATL2_CAEEL (V-type proton ATPase 16 kDa proteolipid subunit 2/3 OS=Caenorhabditis elegans GN=vha-2 PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 4.684e-30
Identity = 66/134 (49.25%), Postives = 88/134 (65.67%), Query Frame = -3 
Query:  263 VFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSS 664
            +F+ +GAAYGTAKS VG+ SMGVMRPEL+MKS++PV+MAG++GIYGL++A+++   +   +  Y L  G+                G AIGIVGDAGVR  AQQP+LFVGM           LYG+IV +IL +
Sbjct:   27 IFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALILGT 160
[Close]
BLAST of DN617758 vs. ExPASy Swiss-Prot
Match: VATL2_CAEBR (V-type proton ATPase 16 kDa proteolipid subunit 2/3 OS=Caenorhabditis briggsae GN=vha-2 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.684e-30
Identity = 66/134 (49.25%), Postives = 88/134 (65.67%), Query Frame = -3 
Query:  263 VFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSS 664
            +F+ +GAAYGTAKS VG+ SMGVMRPEL+MKS++PV+MAG++GIYGL++A+++   +   +  Y L  G+                G AIGIVGDAGVR  AQQP+LFVGM           LYG+IV +IL +
Sbjct:   27 IFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVAMVLKGKVQAASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALILGT 160
[Close]
BLAST of DN617758 vs. ExPASy Swiss-Prot
Match: VATL_SHEEP (V-type proton ATPase 16 kDa proteolipid subunit OS=Ovis aries GN=ATP6V0C PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30
Identity = 70/135 (51.85%), Postives = 89/135 (65.93%), Query Frame = -3 
Query:  260 VFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSR 664
            VFS +GAAYGTAKSG G+A+M VMRPE++MKSI+PVVMAG++ IYGL++AV+I+  +N       L+  +                G AIGIVGDAGVR  AQQP+LFVGM           LYGLIV +ILS++
Sbjct:   24 VFSALGAAYGTAKSGTGIAAMSVMRPEMIMKSIIPVVMAGIIAIYGLVVAVLIANSLN---DGISLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK 155
[Close]
BLAST of DN617758 vs. ExPASy Swiss-Prot
Match: VATL_RAT (V-type proton ATPase 16 kDa proteolipid subunit OS=Rattus norvegicus GN=Atp6v0c PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30
Identity = 72/135 (53.33%), Postives = 88/135 (65.19%), Query Frame = -3 
Query:  260 VFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSR 664
            VFS MGAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+   N       L+  +                G AIGIVGDAGVR  AQQP+LFVGM           LYGLIV +ILS++
Sbjct:   24 VFSAMGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA---NSLTDGITLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK 155
[Close]
BLAST of DN617758 vs. ExPASy Swiss-Prot
Match: VATL_MOUSE (V-type proton ATPase 16 kDa proteolipid subunit OS=Mus musculus GN=Atp6v0c PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30
Identity = 72/135 (53.33%), Postives = 88/135 (65.19%), Query Frame = -3 
Query:  260 VFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSR 664
            VFS MGAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+   N       L+  +                G AIGIVGDAGVR  AQQP+LFVGM           LYGLIV +ILS++
Sbjct:   24 VFSAMGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA---NSLTDGITLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK 155
[Close]
BLAST of DN617758 vs. ExPASy Swiss-Prot
Match: VATL_BOVIN (V-type proton ATPase 16 kDa proteolipid subunit OS=Bos taurus GN=ATP6V0C PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30
Identity = 70/135 (51.85%), Postives = 89/135 (65.93%), Query Frame = -3 
Query:  260 VFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSR 664
            VFS +GAAYGTAKSG G+A+M VMRPE++MKSI+PVVMAG++ IYGL++AV+I+  +N       L+  +                G AIGIVGDAGVR  AQQP+LFVGM           LYGLIV +ILS++
Sbjct:   24 VFSALGAAYGTAKSGTGIAAMSVMRPEMIMKSIIPVVMAGIIAIYGLVVAVLIANSLN---DGISLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK 155
[Close]
BLAST of DN617758 vs. ExPASy Swiss-Prot
Match: VATL_HUMAN (V-type proton ATPase 16 kDa proteolipid subunit OS=Homo sapiens GN=ATP6V0C PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.363e-29
Identity = 70/135 (51.85%), Postives = 88/135 (65.19%), Query Frame = -3 
Query:  260 VFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSR 664
            VFS +GAAYGTAKSG G+A+M VMRPE +MKSI+PVVMAG++ IYGL++AV+I+  +N       L+  +                G AIGIVGDAGVR  AQQP+LFVGM           LYGLIV +ILS++
Sbjct:   24 VFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLIANSLNDDIS---LYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK 155
The following BLAST results are available for this feature:
BLAST of DN617758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
VATL_TORMA3.586e-3053.33V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_ASCSU3.586e-3049.25V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_NEPNO4.684e-3052.59V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL2_CAEEL4.684e-3049.25V-type proton ATPase 16 kDa proteolipid subunit 2/... [more]
VATL2_CAEBR4.684e-3049.25V-type proton ATPase 16 kDa proteolipid subunit 2/... [more]
VATL_SHEEP7.989e-3051.85V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_RAT7.989e-3053.33V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_MOUSE7.989e-3053.33V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_BOVIN7.989e-3051.85V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_HUMAN1.363e-2951.85V-type proton ATPase 16 kDa proteolipid subunit OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01K10_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001K10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617758 ID=DN617758; Name=DN617758; organism=Citrus sinensis; type=EST; length=696bp
AAGGATGGTTCTTTCATATGTCTGATTTCACAGTAAAAATACAACAATAC
AAGCTGAGAACTCGAGCATTATTTTAAGGGGAAAATCTTGCCCTTAATGG
TACAGACAGAATGGAGCTACTTAATAATCTAGTGGGATATTGACAACCAA
CTCAACATTTCCCATGGTGTCCTAGCATCATCTACGTGAGCATGACCAAA
TAATTTTGAGAAACCTATGTTCTGAACCACGCATCCTAATCTGCTCTGGA
TTGGCCAGCTCGGGAAGAGAGAATAATGCCAACAATGAGACCATACAACG
CCAATGCCTCAGCAAAAATGAGAATGAGAATCATTCCAACAAAAAGCTTT
GGTTGCTGTGCATTAGCTCTGACACCAGCATCACCAACGATGCCAATAGC
CATACCAGCAGAGAGACCAGCGAGGCCGCAAGCGAGACCCGAAGACAAAT
GAGCGTAGCCATCGAATAGATAATATGATTTGGCCTTTGGGTTAATGCCA
GTACTAATAATAACAGCAATAATTAAACCATAAATACCTAACACTCCCGC
CATCACAACTGGCACAATCGATTTCATTACAAGCTCTGGCCTCATCACTC
CCATCGATGCTACGCCCACTCCACTCTTCGCCGTCCCATACGCTGCTCCC
ATGCAGGAGAAAACAAGGGCGGCAGCGGCGCCGAGGAAGCCGAAAA
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