DN617758

Overview
NameDN617758
Unique NameDN617758
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5818 contig Csv1_Contig5818:17..712. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617758 vs. ExPASy Swiss-Prot
Match: VATL_CANTR (V-type proton ATPase 16 kDa proteolipid subunit OS=Candida tropicalis GN=VMA3 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.036e-29
Identity = 67/138 (48.55%), Postives = 91/138 (65.94%), Query Frame = -3
Query:  251 VFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSRAGQ 664
            VF+C GA+YGTAKSGVG+ +  V RP+L++K++VPVVMAG++ IYGL+++V++S  ++ K     L+ G+                G AIGIVGDAGVR  AQQP+LFVGM           LYGLIV ++L+SRA Q
Sbjct:   22 VFTCFGASYGTAKSGVGICATSVTRPDLLVKNVVPVVMAGIIAIYGLVVSVLVSDSLSQKQA---LYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALLLNSRASQ 156          
BLAST of DN617758 vs. ExPASy Swiss-Prot
Match: VATL_DICDI (V-type proton ATPase proteolipid subunit OS=Dictyostelium discoideum GN=vatP PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.507e-28
Identity = 70/134 (52.24%), Postives = 89/134 (66.42%), Query Frame = -3
Query:  263 VFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSS 664
            VF+ MGAAYGTAK+ VG+++MGVM+P+LV+K+ +PV+ AGV+ IYGLII VI+  GI P A +Y L   +                GMAIGIVGD+GVRA  QQPKL+V M           LYGLI+GI+LSS
Sbjct:   41 VFTVMGAAYGTAKASVGISNMGVMKPDLVIKAFIPVIFAGVIAIYGLIICVILVGGIKPNA-NYTLMKSFTDLGAGLTVGLCGLAAGMAIGIVGDSGVRAFGQQPKLYVIMMLILIFSEALGLYGLIIGILLSS 173          
BLAST of DN617758 vs. ExPASy Swiss-Prot
Match: VATL2_KLULA (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Kluyveromyces lactis GN=VMA11 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.570e-28
Identity = 62/135 (45.93%), Postives = 90/135 (66.67%), Query Frame = -3
Query:  260 VFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSR 664
            + SC+GAA GTAKSG+G++ +G  +PEL+MKS++PVVM+G+L +YGL++AV+I+ G++P  + Y LF+G+                G AIGIVGD GVR    QP+LFVG+           LYG+IV +IL++R
Sbjct:   28 ILSCLGAAIGTAKSGIGISGIGTFKPELIMKSLIPVVMSGILAVYGLVVAVLIAGGLSP-TEDYTLFNGFMHLSCGLCVGFACLSSGYAIGIVGDVGVRKYMHQPRLFVGIVLILIFSEVLGLYGMIVALILNTR 161          
BLAST of DN617758 vs. ExPASy Swiss-Prot
Match: VATL2_YEAST (V-type proton ATPase subunit c' OS=Saccharomyces cerevisiae GN=VMA11 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.384e-28
Identity = 63/138 (45.65%), Postives = 90/138 (65.22%), Query Frame = -3
Query:  251 VFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSRAGQ 664
            V SC+GAA GTAKSG+G+A +G  +PEL+MKS++PVVM+G+L IYGL++AV+I+  ++P  + Y LF+G+                G AIG+VGD GVR    QP+LFVG+           LYG+IV +IL++R  +
Sbjct:   28 VLSCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVVAVLIAGNLSP-TEDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVGDVGVRKYMHQPRLFVGIVLILIFSEVLGLYGMIVALILNTRGSE 164          
BLAST of DN617758 vs. ExPASy Swiss-Prot
Match: VATL2_CANGA (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Candida glabrata GN=VMA11 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.477e-28
Identity = 61/138 (44.20%), Postives = 90/138 (65.22%), Query Frame = -3
Query:  251 VFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSRAGQ 664
            + SC+GAA GTAKSG+G+A +G  +PEL+MKS++PVVM+G+L IYGL++AV+I+  ++P  + Y LF+G+                G AIGIVGD GVR    QP+LFVG+           LYG+I+ +IL+++  +
Sbjct:   28 ILSCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVVAVLIAGNLSP-TEEYTLFNGFMHLSCGLCVGFACLSSGYAIGIVGDVGVRKYMHQPRLFVGIVLILIFSEVLGLYGMIIALILNTKGSE 164          
BLAST of DN617758 vs. ExPASy Swiss-Prot
Match: VATL1_CAEEL (V-type proton ATPase 16 kDa proteolipid subunit 1 OS=Caenorhabditis elegans GN=vha-1 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27
Identity = 63/133 (47.37%), Postives = 86/133 (64.66%), Query Frame = -3
Query:  263 FSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSS 661
            F+  G+AYGTAK+G G+ASM V RP+LVMK+I+PVVMAG++ IYGL++AVI+S  + P   +Y + + +                G AIGI GDAGVRA +QQP++FVGM           LYG+IV +IL +
Sbjct:   36 FAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIYGLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQPRMFVGMILILIFAEVLGLYGMIVALILGA 168          
BLAST of DN617758 vs. ExPASy Swiss-Prot
Match: VATL_SCHPO (V-type proton ATPase 16 kDa proteolipid subunit OS=Schizosaccharomyces pombe GN=vma3 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.841e-27
Identity = 64/136 (47.06%), Postives = 90/136 (66.18%), Query Frame = -3
Query:  257 VFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSRA 664
            VF+  GAAYGTAK+GVG+++MGV+RP+L++K+ +PVVMAG++ IYGL+++V+IS  +    +   L+ G+                G AIGIVGDAGVR  AQQP+LFV M           LYGLIV ++L++RA
Sbjct:   23 VFASFGAAYGTAKAGVGISAMGVLRPDLIVKNTIPVVMAGIIAIYGLVVSVLISGNLK---QILSLYSGFIQLGAGLSVGLAGLAAGFAIGIVGDAGVRGTAQQPRLFVAMILILIFAEVLGLYGLIVALLLNTRA 155          
BLAST of DN617758 vs. ExPASy Swiss-Prot
Match: VATL2_ASHGO (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Ashbya gossypii GN=VMA11 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.711e-27
Identity = 60/135 (44.44%), Postives = 89/135 (65.93%), Query Frame = -3
Query:  260 VFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSR 664
            + S +GAA GTAKSG+G++ +G  RPEL+MKS++PVVM+G+L +YGL++AV+++ G++P  + Y LF+G+                G AIGIVGD GVR    QP+LFVG+           LYG+I+ +IL++R
Sbjct:   27 ILSSLGAAIGTAKSGIGISGIGTFRPELIMKSLIPVVMSGILAVYGLVVAVLVAGGLSP-TEEYTLFNGFMHLAAGLCVGFACLSSGYAIGIVGDVGVRKFMHQPRLFVGIVLILIFAEVLGLYGMIIALILNTR 160          
BLAST of DN617758 vs. ExPASy Swiss-Prot
Match: VATL1_YEAST (V-type proton ATPase subunit c OS=Saccharomyces cerevisiae GN=VMA3 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.711e-27
Identity = 64/138 (46.38%), Postives = 90/138 (65.22%), Query Frame = -3
Query:  251 VFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSRAGQ 664
            +F+ +GAAYGTAKSGVG+ +  V+RP+L+ K+IVPV+MAG++ IYGL+++V++   +  K     L+ G+                G AIGIVGDAGVR ++QQP+LFVGM           LYGLIV ++L+SRA Q
Sbjct:   22 IFTSLGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAIYGLVVSVLVCYSLGQKQA---LYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGMILILIFAEVLGLYGLIVALLLNSRATQ 156          
BLAST of DN617758 vs. ExPASy Swiss-Prot
Match: VATL2_DEBHA (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Debaryomyces hansenii GN=VMA11 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.080e-26
Identity = 58/135 (42.96%), Postives = 90/135 (66.67%), Query Frame = -3
Query:  260 VFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSR 664
            + SC GAA GTAKSG+G++ +G  +PEL+MKS++PVVM+G+L +YGL+++V+I+ G++P  ++Y LF+G+                G +IGIVGD GVR    QP+LFVG+           LYG+I+ +IL+++
Sbjct:   27 ILSCAGAAIGTAKSGIGISGIGTFKPELIMKSLIPVVMSGILSVYGLVVSVLIAGGLSP-TENYSLFNGFMHLACGLSVGFACLASGYSIGIVGDEGVRQFMHQPRLFVGIVLILIFAEVLGLYGMIIALILNTK 160          
The following BLAST results are available for this feature:
BLAST of DN617758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
VATL_CANTR3.036e-2948.55V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_DICDI1.507e-2852.24V-type proton ATPase proteolipid subunit OS=Dictyo... [more]
VATL2_KLULA2.570e-2845.93V-type proton ATPase 16 kDa proteolipid subunit 2 ... [more]
VATL2_YEAST4.384e-2845.65V-type proton ATPase subunit c' OS=Saccharomyces c... [more]
VATL2_CANGA7.477e-2844.20V-type proton ATPase 16 kDa proteolipid subunit 2 ... [more]
VATL1_CAEEL2.176e-2747.37V-type proton ATPase 16 kDa proteolipid subunit 1 ... [more]
VATL_SCHPO2.841e-2747.06V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL2_ASHGO3.711e-2744.44V-type proton ATPase 16 kDa proteolipid subunit 2 ... [more]
VATL1_YEAST3.711e-2746.38V-type proton ATPase subunit c OS=Saccharomyces ce... [more]
VATL2_DEBHA1.080e-2642.96V-type proton ATPase 16 kDa proteolipid subunit 2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01K10_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001K10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617758 ID=DN617758; Name=DN617758; organism=Citrus sinensis; type=EST; length=696bp
AAGGATGGTTCTTTCATATGTCTGATTTCACAGTAAAAATACAACAATAC
AAGCTGAGAACTCGAGCATTATTTTAAGGGGAAAATCTTGCCCTTAATGG
TACAGACAGAATGGAGCTACTTAATAATCTAGTGGGATATTGACAACCAA
CTCAACATTTCCCATGGTGTCCTAGCATCATCTACGTGAGCATGACCAAA
TAATTTTGAGAAACCTATGTTCTGAACCACGCATCCTAATCTGCTCTGGA
TTGGCCAGCTCGGGAAGAGAGAATAATGCCAACAATGAGACCATACAACG
CCAATGCCTCAGCAAAAATGAGAATGAGAATCATTCCAACAAAAAGCTTT
GGTTGCTGTGCATTAGCTCTGACACCAGCATCACCAACGATGCCAATAGC
CATACCAGCAGAGAGACCAGCGAGGCCGCAAGCGAGACCCGAAGACAAAT
GAGCGTAGCCATCGAATAGATAATATGATTTGGCCTTTGGGTTAATGCCA
GTACTAATAATAACAGCAATAATTAAACCATAAATACCTAACACTCCCGC
CATCACAACTGGCACAATCGATTTCATTACAAGCTCTGGCCTCATCACTC
CCATCGATGCTACGCCCACTCCACTCTTCGCCGTCCCATACGCTGCTCCC
ATGCAGGAGAAAACAAGGGCGGCAGCGGCGCCGAGGAAGCCGAAAA
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