DN617754

Overview
NameDN617754
Unique NameDN617754
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length647
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12590 contig Csv1_Contig12590:31..677. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617754 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.004e-52
Identity = 96/170 (56.47%), Postives = 116/170 (68.24%), Query Frame = 3
Query:  144 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPK-WCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAXDVHSVSIKGSKTGW 647
            W    ATFY              YGNLY+ GYG N AALS+ALFN+G  CG+CY + C+     WC PG SI +TATN CPPN A  +D GGWCNPP +HFDM++PA+  IA Y+AGIVP++F+R+PC K GGIRFT++G  YF LV V NVGG+  V  VSIKGSKT W
Sbjct:   23 WTPATATFYGGSDGAGTMGGACGYGNLYNAGYGLNNAALSSALFNDGAMCGACYTIACDTSQSTWCKPGTSITITATNLCPPNYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTISGRDYFELVTVFNVGGSGVVAQVSIKGSKTDW 192          
BLAST of DN617754 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.004e-52
Identity = 90/168 (53.57%), Postives = 118/168 (70.24%), Query Frame = 3
Query:  144 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAXDVHSVSIKGSKTGW 647
            W    ATFY              YGNL+ QGYG  TAALSTALFN+G +CG+CYE+ C  DP+WCLPGS+ +TATNFCP N + + D   WCNPP +HFD++   FL+IA+Y+AG+VP+ +RRIPC+K GG++F   G+ YF +VL+ NVGGA D+  V +K +KTGW
Sbjct:   58 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKENKTGW 223          
BLAST of DN617754 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 5.510e-51
Identity = 92/171 (53.80%), Postives = 117/171 (68.42%), Query Frame = 3
Query:  144 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDP--KWCLP-GSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAXDVHSVSIKGSKTGW 647
            W    ATFY              YGNLY QGYG   AALSTALFN+G +CG CY + C+ D   +WC P G++ VTATN CPPN AL +D GGWCNPP +HFDM++PA+ +I  YRAGIVP+ +RR+ C ++GG+RFTV G  +F LVLV NV G+  V +VS++G+ TGW
Sbjct:   27 WIPATATFYGGNDGSGTMGGACGYGNLYDQGYGLENAALSTALFNDGAACGQCYLIVCDTDKAGRWCKPRGAVTVTATNLCPPNWALPSDGGGWCNPPRRHFDMSQPAWERIGVYRAGIVPVLYRRVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVSVRGAGTGW 197          
BLAST of DN617754 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.227e-50
Identity = 85/170 (50.00%), Postives = 116/170 (68.24%), Query Frame = 3
Query:  138 GGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAXDVHSVSIKGSKTGW 647
            G W+  HATFY              YGNL++ GYG +TAALST LFN+G  CG C+++ C   P      S +VTATN CPPN    ++ GGWCNPP  HFDMA+PAF+++A +RAGI+P+++RR+PC + GG+RF   G+SY+ L+ V NVGGA D+ S+++KGS+T W
Sbjct:   35 GPWRYAHATFYGDETGGETMGGACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKSTVVTATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNW 204          
BLAST of DN617754 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 4.664e-50
Identity = 92/171 (53.80%), Postives = 115/171 (67.25%), Query Frame = 3
Query:  144 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEND--PKWCLPGSII-VTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAXDVHSVSIKGSKTGW 647
            W    ATFY              YGNLY QGYG + AALS ALFN+G SCG CY + C+    P+WC  G+ + VTATN CPPN AL +D GGWCNPP  HFDM++PA+ QI  Y+AGIVP+ ++R+ C ++GG+RFTV G +YF LVL+TNV G+  V S  IKG+ TGW
Sbjct:   28 WSPATATFYGGSDGSGTMGGACGYGNLYDQGYGVDNAALSQALFNDGASCGQCYLIVCDTSRAPQWCKAGTAVTVTATNLCPPNWALPSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGW 198          
BLAST of DN617754 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.772e-49
Identity = 87/173 (50.29%), Postives = 117/173 (67.63%), Query Frame = 3
Query:  135 GGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAXDVHSVSIKGSKTGW 647
            G  W++  ATFY              YGN+Y  GYG  T ALSTALFN G +CG C+++KC + P  C  GS   +VTATN CPPN   +++NGGWCNPP  HFD+ +PAF++IA ++AGI+P+S+RR+ C K GGIRF   G+ Y+ LV V NVGG  D+ ++++KGS+TGW
Sbjct:   28 GTPWRTASATFYGDDTGSATMGGACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVSSPN-CYYGSPATVVTATNICPPNYGQASNNGGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGW 199          
BLAST of DN617754 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 2.559e-48
Identity = 90/176 (51.14%), Postives = 116/176 (65.91%), Query Frame = 3
Query:  126 GDYGGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCE-NDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAXDVHSVSIKGSKTGW 647
            G+    W S  ATFY              YGN+YS GYGTNT ALS+AL+ +G SCG+CY + C+ +  +WC  G S+ VTATN+CPPN + S D GGWCNPP +HFDM++PA+  IA Y +GIVP+ + R PC + GGIRF + GH Y+ LVLVTNV G+  V +  +KGS T W
Sbjct:   21 GEAAQQWTSATATFYGGSDASGTMGGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWCKNGTSVTVTATNYCPPNYSESGDAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEW 196          
BLAST of DN617754 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 6.970e-46
Identity = 91/172 (52.91%), Postives = 109/172 (63.37%), Query Frame = 3
Query:  141 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEND--PKWCLPGSII-VTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAXDVHSVSIKGSKTGW 647
            GW  G ATFY              YGNLY QGYG N AALST LFNNG SCG CY + C  D  P  C  G+ I VT TNFCPPN  L    GGWCN    HFDM++PA+  I  Y AGIVPI ++++ C + GG+RFT+ G +YF LVLVTN+ G+  + S+S+KGS TGW
Sbjct:   22 GWLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGTAITVTGTNFCPPNYDLPY--GGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVKGSSTGW 191          
BLAST of DN617754 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.649e-45
Identity = 88/171 (51.46%), Postives = 110/171 (64.33%), Query Frame = 3
Query:  144 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEND--PKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAXDVHSVSIKGSKTGW 647
            W  G ATFY              YGNLY QGYG N AALST LFN+G SCG CY + C+    P WC  G +I VT TN+CPPN  L    GGWCN    HFDM++PA+  I  Y AGI+PI ++++ C + GG+RFT+NG +YF LVLVTN+ G+  + S+S+KGS TGW
Sbjct:   23 WLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGKAITVTGTNYCPPNYDLPY--GGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIASMSVKGSCTGW 191          
BLAST of DN617754 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.518e-45
Identity = 88/173 (50.87%), Postives = 111/173 (64.16%), Query Frame = 3
Query:  144 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGG--WCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAXDVHSVSIK-GSKTGW 647
            W   HATFY              YGNLY+ GYGT+TAALST LF +G  CG+CY+M+C      C  GS  I VTATN CPPN A   D GG  WCNPP  HFD+++PAF+++A +RAGIVP+ +RR+PCA+ GG+RF + G+ Y+ L  V NV GA DV  + +K G   GW
Sbjct:   37 WTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGTAS-CYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGW 208          
The following BLAST results are available for this feature:
BLAST of DN617754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
EXP33_ORYSJ1.004e-5256.47Expansin-A33 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP26_ARATH1.004e-5253.57Putative expansin-A26 OS=Arabidopsis thaliana GN=E... [more]
EXP27_ORYSJ5.510e-5153.80Putative expansin-A27 OS=Oryza sativa subsp. japon... [more]
EXPA7_ARATH1.227e-5050.00Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 ... [more]
EXP31_ORYSJ4.664e-5053.80Expansin-A31 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP18_ARATH1.772e-4950.29Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=... [more]
EXPA9_ORYSJ2.559e-4851.14Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP18_ORYSJ6.970e-4652.91Expansin-A18 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP19_ORYSJ2.649e-4551.46Expansin-A19 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP30_ORYSJ4.518e-4550.87Putative expansin-A30 OS=Oryza sativa subsp. japon... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01K08_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001K08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617754 ID=DN617754; Name=DN617754; organism=Citrus sinensis; type=EST; length=647bp
TTTTTCTTAACAAAAAAACACATAAACATAAGCAGCCAGCAGTAGCAGCC
ATGGCCAATATTGCAGCATCATCTAGCGTTGCTCTCCTTTTGTTTGTGCT
CAATTTTTGCTTTCGTGGCACATTTGGAGACTATGGTGGTGGGTGGCAAA
GTGGCCATGCAACTTTCTATGGCGGGGGTGATGCTTCCGGCACAATGGGT
GGTGCTTGTGGGTATGGCAATTTGTACAGCCAAGGCTATGGGACTAACAC
TGCAGCACTTAGTACCGCTCTATTCAACAATGGCCTAAGCTGTGGTTCAT
GCTATGAAATGAAATGTGAAAATGACCCCAAGTGGTGCCTCCCCGGCTCC
ATCATTGTCACCGCCACCAACTTCTGCCCACCTAACCTTGCCCTGTCTAA
CGACAACGGCGGTTGGTGCAATCCTCCCCTCCAGCACTTTGACATGGCTG
AGCCCGCTTTCTTGCAAATTGCCCAATACCGCGCCGGCATCGTCCCAATT
TCCTTCAGAAGGATCCCGTGTGCGAAGAAAGGAGGAATAAGGTTTACCGT
CAATGGACACTCATACTTCAACCTGGTTTTGGTCACAAATGTCGGAGGAG
CANGAGATGTACATTCAGTATCAATCAAGGGTTCAAAGACTGGATGG
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