DN617750

Overview
NameDN617750
Unique NameDN617750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length526
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1850 contig Csv1_Contig1850:281..806. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX4_CANTR (Acyl-coenzyme A oxidase 4 OS=Candida tropicalis GN=POX4 PE=2 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 3.855e-21
Identity = 60/154 (38.96%), Postives = 82/154 (53.25%), Query Frame = 2
Query:   74 YNQTMEQQREMTMKRISYLLERNVFEGWLTXXXXXXXXXXXXXXXVTGIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVV---LGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            Y+ T +QQRE+T  +I+ +      E   T               + GIFD  +  +IGV+  L+   I+  GT      W  + E   V    GCF MTEL HGSNV G+ET  T+D  + EF+INTP   A K+WIGGAA+ ATH  V+++L
Sbjct:   68 YDLTKDQQRELTAVKINRIARYREQESIDTFNKRLS---------LIGIFDPQVGTRIGVNLGLFLSCIRGNGTTSQLNYWANEKETADVKGIYGCFGMTELAHGSNVAGLETTATFDKESDEFVINTPHIGATKWWIGGAAHSATHCSVYARL 212          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX2_CANTR (Acyl-coenzyme A oxidase 2 OS=Candida tropicalis GN=POX2 PE=3 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 6.576e-21
Identity = 60/172 (34.88%), Postives = 93/172 (54.07%), Query Frame = 2
Query:   23 KLFNPRKRGEKVYVAPD-YNQTMEQQREMTMKRISYLLERNVFEGWLTXXXXXXXXXXXXXXXVTGIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVV---LGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            +L+   +R   +   P+ ++ T +Q+RE+   RI+ + +    E +                 +  + D SL I++ V+  L+   ++  GTQ+  + W    E  +V    GCF MTELGHGSNV G ET  T+D  T EFII+TP   A K+WIGGAA+ ATHT+ +++L
Sbjct:   72 RLYQSIERDPILQTRPEQFDYTQKQERELVANRINQMTKFLETEPY---------GKFRRRLQLMTVIDPSLGIRMLVNIGLFLNCVRGNGTQKQFDFWSNKKEAGIVKQLYGCFGMTELGHGSNVAGCETTATFDEKTDEFIIDTPHIGATKWWIGGAAHSATHTVCYARL 234          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX_CANGA (Acyl-coenzyme A oxidase OS=Candida glabrata GN=POX1 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.465e-20
Identity = 50/104 (48.08%), Postives = 67/104 (64.42%), Query Frame = 2
Query:  224 DHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVV---LGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            D  L+ +IGVH  L+G  I+  GT    + WL+     ++    GCFAMTELGHGSNV  ++T  TYD  +  FIINTP  +A K+WIGGAA+ ATHT  +++L
Sbjct:  140 DPQLSTRIGVHLGLFGNCIKGNGTDEQIKYWLQTRGAILIKGIYGCFAMTELGHGSNVAQLQTTATYDQESDTFIINTPDLAATKWWIGGAAHSATHTACYARL 243          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX_PICPA (Acyl-coenzyme A oxidase OS=Pichia pastoris GN=POX1 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.499e-20
Identity = 61/159 (38.36%), Postives = 88/159 (55.35%), Query Frame = 2
Query:   74 YNQTMEQQREMTMKRISYL---LERNV--FEGWLTXXXXXXXXXXXXXXXVTGIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDT-ENYV--VLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            Y+ T +Q RE+T ++I+ L   +E++   FE +                 +  I D  L  ++GVH  L+  AI+  GT+   + W  +    Y+  V GCF MTEL HGSNV G+ET  T+D  T EF INTP   A K+WIGGAA+ A H +V+++L
Sbjct:   64 YDLTKDQHRELTAQKIARLASYIEKDAPFFENF------------QKRLNLIAIVDPQLGTRVGVHLGLFLSAIRGNGTEEQFKYWAFERGAAYLKDVYGCFGMTELAHGSNVAGLETTATFDQKTKEFEINTPHLGATKWWIGGAAHSANHCVVYARL 210          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOXL_MOUSE (Acyl-coenzyme A oxidase-like protein OS=Mus musculus GN=Acoxl PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.499e-20
Identity = 49/101 (48.51%), Postives = 64/101 (63.37%), Query Frame = 2
Query:  224 DHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            D S++IK G+ F L+GGAI   G+  H  KW    +     G FAMTE GHGSNVRGI+T  T+D +  EF+I+ PCE+A K +IG A  H  +  VF+QL
Sbjct:   73 DVSMSIKCGILFLLFGGAISNLGSPEHVTKWFWPLKEQKYTGMFAMTERGHGSNVRGIQTEATFDLDNQEFVIDMPCENAHKMYIGNAM-HGNYAAVFAQL 172          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOXL_HUMAN (Acyl-coenzyme A oxidase-like protein OS=Homo sapiens GN=ACOXL PE=2 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 5.567e-20
Identity = 46/106 (43.40%), Postives = 68/106 (64.15%), Query Frame = 2
Query:  209 VTGIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            V  + D +  +K G+ ++L+GGAI+  G+  H  KW +  +     G FAMTE GHGSN RGI+T  T+D +  EF+I+TPCE+A+K +IG A  +  +  VF+QL
Sbjct:   42 VLSMADMATGVKCGIIYWLFGGAIRNLGSPEHVTKWFQPLQEQKYTGMFAMTERGHGSNARGIQTEATFDLSAQEFVIDTPCENAEKMYIGNAM-YGNYAAVFAQL 146          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX_KLULA (Acyl-coenzyme A oxidase OS=Kluyveromyces lactis GN=POX1 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 7.270e-20
Identity = 49/104 (47.12%), Postives = 66/104 (63.46%), Query Frame = 2
Query:  224 DHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYV---VLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            D  L+ +IGVH  L+G  I+  GT      WL++    +   + GCFAMTELGHGSNV  ++T  TYD ++  F INTP   A K+WIGGAA+ ATHT  +++L
Sbjct:  136 DPGLSTRIGVHLGLFGNCIKGNGTDEQIHYWLQEKGALLLKGIYGCFAMTELGHGSNVAQLQTTATYDPSSDTFKINTPDLLATKWWIGGAAHSATHTTAYARL 239          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX1_ARATH (Peroxisomal acyl-coenzyme A oxidase 1 OS=Arabidopsis thaliana GN=ACX1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.240e-19
Identity = 40/94 (42.55%), Postives = 64/94 (68.09%), Query Frame = 2
Query:  245 IGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            + +H+ ++  AI+  GT+   +KWL       ++GC+A TELGHGSNV+G+ET  T+D  T EF+I+TP ++A K+W GG    +TH +V+++L
Sbjct:   99 VDLHWGMFVPAIKGQGTEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFVIHTPTQTASKWWPGGLGKVSTHAVVYARL 192          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX_ASHGO (Acyl-coenzyme A oxidase OS=Ashbya gossypii GN=POX1 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.620e-19
Identity = 48/109 (44.04%), Postives = 69/109 (63.30%), Query Frame = 2
Query:  209 VTGIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVV---LGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            +  + D  LA ++GV+  L+G A++  GT    + WL++     V    GCFAMTELGHGSNV  ++T  TYD  +  F+I TP   A K+WIGGAA+ ATH+ V+++L
Sbjct:  131 LVALIDPQLATRLGVNLSLFGNAVRGNGTDEQIKYWLQERGLIFVKGIYGCFAMTELGHGSNVANLQTRATYDPASDSFVIQTPDLVATKWWIGGAAHSATHSTVYARL 239          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX3_RAT (Peroxisomal acyl-coenzyme A oxidase 3 OS=Rattus norvegicus GN=Acox3 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.712e-19
Identity = 45/104 (43.27%), Postives = 64/104 (61.54%), Query Frame = 2
Query:  215 GIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            G++D SLA K  +H  ++G  I   G++ HH K+L    N  + GCFA+TEL HGSN + + T   YD  T EFI+++P   A K+W+G     ATH +VF+QL
Sbjct:  111 GMYDWSLANKCVLHMLVFGSTIIGSGSE-HHFKYLEKIYNLEIFGCFALTELSHGSNTKAMRTTAHYDPATQEFILHSPDFEAAKFWVGNLGKTATHAVVFAQL 213          
The following BLAST results are available for this feature:
BLAST of DN617750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
ACOX4_CANTR3.855e-2138.96Acyl-coenzyme A oxidase 4 OS=Candida tropicalis GN... [more]
ACOX2_CANTR6.576e-2134.88Acyl-coenzyme A oxidase 2 OS=Candida tropicalis GN... [more]
ACOX_CANGA1.465e-2048.08Acyl-coenzyme A oxidase OS=Candida glabrata GN=POX... [more]
ACOX_PICPA2.499e-2038.36Acyl-coenzyme A oxidase OS=Pichia pastoris GN=POX1... [more]
ACOXL_MOUSE2.499e-2048.51Acyl-coenzyme A oxidase-like protein OS=Mus muscul... [more]
ACOXL_HUMAN5.567e-2043.40Acyl-coenzyme A oxidase-like protein OS=Homo sapie... [more]
ACOX_KLULA7.270e-2047.12Acyl-coenzyme A oxidase OS=Kluyveromyces lactis GN... [more]
ACOX1_ARATH1.240e-1942.55Peroxisomal acyl-coenzyme A oxidase 1 OS=Arabidops... [more]
ACOX_ASHGO1.620e-1944.04Acyl-coenzyme A oxidase OS=Ashbya gossypii GN=POX1... [more]
ACOX3_RAT4.712e-1943.27Peroxisomal acyl-coenzyme A oxidase 3 OS=Rattus no... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01K06_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001K06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617750 ID=DN617750; Name=DN617750; organism=Citrus sinensis; type=EST; length=526bp
GTTCAATCTCATGGTGCAGAGCAAGCTGTTCAATCCGAGAAAAAGAGGAG
AGAAGGTCTACGTGGCGCCTGATTACAATCAGACGATGGAGCAGCAGCGA
GAGATGACGATGAAGCGAATCTCGTATTTGCTTGAACGCAACGTTTTTGA
AGGATGGCTTACTGCCAAAGGAGCAGAAGCCGAGTTGAGAAAATTAGCGC
TGCTTGAGGTCACCGGAATATTCGACCACTCGCTAGCGATTAAAATCGGT
GTTCACTTCTTTTTATGGGGAGGCGCCATTCAGTTTTTCGGTACACAGCG
CCACCACGAGAAGTGGCTGAGGGACACTGAAAATTATGTGGTCTTGGGTT
GCTTTGCAATGACAGAATTGGGCCACGGAAGTAATGTTCGAGGAATTGAA
ACTGTCACTACATATGATGCAAATACGGGAGAGTTTATCATCAACACCCC
CTGTGAATCAGCTCAGAAGTATTGGATCGGTGGGGCAGCTAATCATGCAA
CGCATACAATCGTCTTTTCACAGCTC
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