DN617750

Overview
NameDN617750
Unique NameDN617750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length526
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1850 contig Csv1_Contig1850:281..806. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX_YEAST (Acyl-coenzyme A oxidase OS=Saccharomyces cerevisiae GN=POX1 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 8.038e-19
Identity = 47/104 (45.19%), Postives = 64/104 (61.54%), Query Frame = 2
Query:  224 DHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRD---TENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            D  L  ++GVH  L+G  I+  GT      WL++   T    + GCFAMTELGHGSNV  ++T   YD     F+I+TP  +A K+WIGGAA+ ATH  V+++L
Sbjct:  140 DPQLGTRVGVHLGLFGNCIKGNGTDEQIRYWLQERGATLMKGIYGCFAMTELGHGSNVAQLQTRAVYDKQNDTFVIDTPDLTATKWWIGGAAHSATHAAVYARL 243          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACO12_ARATH (Putative peroxisomal acyl-coenzyme A oxidase 1.2 OS=Arabidopsis thaliana GN=ACX1.2 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.791e-18
Identity = 37/94 (39.36%), Postives = 65/94 (69.15%), Query Frame = 2
Query:  245 IGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            + +H+ ++  AI+  GT++  +KWL       ++GC+A TELGHGSNV+G+ET  T+D  T +FII++P +++ K+W GG    +TH +++++L
Sbjct:   99 LDLHWGMFVPAIKGQGTEQQQQKWLSLATKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDQFIIHSPTQTSSKWWPGGLGKVSTHAVIYARL 192          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX3_PONAB (Peroxisomal acyl-coenzyme A oxidase 3 OS=Pongo abelii GN=ACOX3 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.054e-18
Identity = 44/104 (42.31%), Postives = 64/104 (61.54%), Query Frame = 2
Query:  215 GIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            G++D SLA K  +H  ++G AI   G++RH   +++      + GCFA+TEL HGSN + I T   YD  T EFII++P   A K+W+G     ATH +VF++L
Sbjct:  111 GMYDSSLAAKYLIHSLVFGSAIYSSGSERHLT-YIQKIFRMEIFGCFALTELSHGSNTKAIRTTAHYDPATEEFIIHSPDFEAAKFWVGNMGKTATHAVVFAKL 213          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX3_MOUSE (Peroxisomal acyl-coenzyme A oxidase 3 OS=Mus musculus GN=Acox3 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 3.054e-18
Identity = 42/104 (40.38%), Postives = 65/104 (62.50%), Query Frame = 2
Query:  215 GIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            G++D SLA K  +H  ++G  +   G+++H  K+L    +  + GCFA+TEL HGSN + + T   YD +T EFI+++P   A K+W+G     ATH +VF+QL
Sbjct:  111 GMYDWSLANKCVLHMLVFGTTVFVSGSEKHF-KYLEKIYSLEIFGCFALTELSHGSNTKAMRTTAHYDPDTQEFILHSPDFEAAKFWVGNLGKTATHAVVFAQL 213          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX3_HUMAN (Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapiens GN=ACOX3 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 6.805e-18
Identity = 43/104 (41.35%), Postives = 64/104 (61.54%), Query Frame = 2
Query:  215 GIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            G++D SLA K  +H  ++G A+   G++RH   +++      + GCFA+TEL HGSN + I T   YD  T EFII++P   A K+W+G     ATH +VF++L
Sbjct:  111 GMYDSSLAAKYLLHSLVFGSAVYSSGSERHLT-YIQKIFRMEIFGCFALTELSHGSNTKAIRTTAHYDPATEEFIIHSPDFEAAKFWVGNMGKTATHAVVFAKL 213          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX1_RAT (Peroxisomal acyl-coenzyme A oxidase 1 OS=Rattus norvegicus GN=Acox1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 9.826e-17
Identity = 36/94 (38.30%), Postives = 61/94 (64.89%), Query Frame = 2
Query:  245 IGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            +G+++ ++   +   GT    EKW+R ++   ++G +A TE+GHG+++RG+ET  TYD  T EFI+N+P  ++ K+W GG    + H IV +QL
Sbjct:  100 VGLNYSMFIPTLLNQGTTAQQEKWMRPSQELQIIGTYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQL 193          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX1_BOVIN (Peroxisomal acyl-coenzyme A oxidase 1 OS=Bos taurus GN=ACOX1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.189e-16
Identity = 36/94 (38.30%), Postives = 60/94 (63.83%), Query Frame = 2
Query:  245 IGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            +G+++ ++   +   GT    EKWL  ++   ++G +A TE+GHG+++RG+ET  TYD  T EFI+N+P  ++ K+W GG    + H IV +QL
Sbjct:  100 VGLNYSMFIPTLLNQGTTAQQEKWLHSSKGLEIIGTYAQTEMGHGTHLRGLETTATYDPETQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQL 193          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX1_CAVPO (Peroxisomal acyl-coenzyme A oxidase 1 OS=Cavia porcellus GN=ACOX1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.859e-16
Identity = 37/94 (39.36%), Postives = 59/94 (62.77%), Query Frame = 2
Query:  245 IGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            +G+++ ++   +   GT    EKWL  +    ++G +A TE+GHG+++RG+ET  TYD  T EFIIN+P  ++ K+W GG    + H IV +QL
Sbjct:  100 VGLNYSMFIPTLLNQGTTAQQEKWLHPSTGLQIIGTYAQTEMGHGTHLRGLETTATYDPKTQEFIINSPTVTSIKWWPGGLGKTSNHAIVLAQL 193          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX1_MOUSE (Peroxisomal acyl-coenzyme A oxidase 1 OS=Mus musculus GN=Acox1 PE=1 SV=4)

HSP 1 Score: 84.3445 bits (207), Expect = 3.734e-16
Identity = 35/94 (37.23%), Postives = 60/94 (63.83%), Query Frame = 2
Query:  245 IGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            +G+++ ++   +   GT    EKW+  ++   ++G +A TE+GHG+++RG+ET  TYD  T EFI+N+P  ++ K+W GG    + H IV +QL
Sbjct:  100 VGLNYSMFIPTLLNQGTTAQQEKWMHPSQELQIIGTYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQL 193          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX1_PONAB (Peroxisomal acyl-coenzyme A oxidase 1 OS=Pongo abelii GN=ACOX1 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 4.877e-16
Identity = 36/94 (38.30%), Postives = 60/94 (63.83%), Query Frame = 2
Query:  245 IGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            +G+++ ++   +   GT    EKWL  ++   ++G +A TE+GHG+++RG+ET  TYD  T EFI+N+P  ++ K+W GG    + H IV +QL
Sbjct:  100 VGLNYSMFIPTLLNQGTTAQKEKWLLSSKGLQIIGTYAQTEMGHGTHLRGLETTATYDPETQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQL 193          
The following BLAST results are available for this feature:
BLAST of DN617750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
ACOX_YEAST8.038e-1945.19Acyl-coenzyme A oxidase OS=Saccharomyces cerevisia... [more]
ACO12_ARATH1.791e-1839.36Putative peroxisomal acyl-coenzyme A oxidase 1.2 O... [more]
ACOX3_PONAB3.054e-1842.31Peroxisomal acyl-coenzyme A oxidase 3 OS=Pongo abe... [more]
ACOX3_MOUSE3.054e-1840.38Peroxisomal acyl-coenzyme A oxidase 3 OS=Mus muscu... [more]
ACOX3_HUMAN6.805e-1841.35Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapi... [more]
ACOX1_RAT9.826e-1738.30Peroxisomal acyl-coenzyme A oxidase 1 OS=Rattus no... [more]
ACOX1_BOVIN2.189e-1638.30Peroxisomal acyl-coenzyme A oxidase 1 OS=Bos tauru... [more]
ACOX1_CAVPO2.859e-1639.36Peroxisomal acyl-coenzyme A oxidase 1 OS=Cavia por... [more]
ACOX1_MOUSE3.734e-1637.23Peroxisomal acyl-coenzyme A oxidase 1 OS=Mus muscu... [more]
ACOX1_PONAB4.877e-1638.30Peroxisomal acyl-coenzyme A oxidase 1 OS=Pongo abe... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01K06_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001K06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617750 ID=DN617750; Name=DN617750; organism=Citrus sinensis; type=EST; length=526bp
GTTCAATCTCATGGTGCAGAGCAAGCTGTTCAATCCGAGAAAAAGAGGAG
AGAAGGTCTACGTGGCGCCTGATTACAATCAGACGATGGAGCAGCAGCGA
GAGATGACGATGAAGCGAATCTCGTATTTGCTTGAACGCAACGTTTTTGA
AGGATGGCTTACTGCCAAAGGAGCAGAAGCCGAGTTGAGAAAATTAGCGC
TGCTTGAGGTCACCGGAATATTCGACCACTCGCTAGCGATTAAAATCGGT
GTTCACTTCTTTTTATGGGGAGGCGCCATTCAGTTTTTCGGTACACAGCG
CCACCACGAGAAGTGGCTGAGGGACACTGAAAATTATGTGGTCTTGGGTT
GCTTTGCAATGACAGAATTGGGCCACGGAAGTAATGTTCGAGGAATTGAA
ACTGTCACTACATATGATGCAAATACGGGAGAGTTTATCATCAACACCCC
CTGTGAATCAGCTCAGAAGTATTGGATCGGTGGGGCAGCTAATCATGCAA
CGCATACAATCGTCTTTTCACAGCTC
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