DN617750

Overview
NameDN617750
Unique NameDN617750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length526
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1850 contig Csv1_Contig1850:281..806. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX1_HUMAN (Peroxisomal acyl-coenzyme A oxidase 1 OS=Homo sapiens GN=ACOX1 PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 4.877e-16
Identity = 36/94 (38.30%), Postives = 60/94 (63.83%), Query Frame = 2
Query:  245 IGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            +G+++ ++   +   GT    EKWL  ++   ++G +A TE+GHG+++RG+ET  TYD  T EFI+N+P  ++ K+W GG    + H IV +QL
Sbjct:  100 VGLNYSMFIPTLLNQGTTAQKEKWLLSSKGLQIIGTYAQTEMGHGTHLRGLETTATYDPETQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQL 193          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX1_DROME (Probable peroxisomal acyl-coenzyme A oxidase 1 OS=Drosophila melanogaster GN=CG5009 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.877e-16
Identity = 39/94 (41.49%), Postives = 58/94 (61.70%), Query Frame = 2
Query:  245 IGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            + +H+ ++   I   GT     +WL    +  ++G +A TELGHG+ +RG+ET   YDA+T EF+INTP  SA K+W GG  + A H +V +QL
Sbjct:  113 LALHYVMFVPTIMGQGTMDQQVEWLSKAWDCEIIGTYAQTELGHGTFLRGLETRADYDASTQEFVINTPSLSAYKWWPGGLGHTANHAVVVAQL 206          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX1_DICDI (Peroxisomal acyl-coenzyme A oxidase 1 OS=Dictyostelium discoideum GN=acox1 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.853e-15
Identity = 37/66 (56.06%), Postives = 48/66 (72.73%), Query Frame = 2
Query:  329 ENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            ENY   G ++ TE+GHGSNV+GIET  T+   TGEF +N+P  ++ K+WIGG    ATHTIVF+QL
Sbjct:  136 ENYQYFGSYSQTEIGHGSNVQGIETTCTFIKETGEFELNSPNLTSTKFWIGGLGKLATHTIVFAQL 201          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX2_CANMA (Acyl-coenzyme A oxidase 2 OS=Candida maltosa GN=POX2 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.420e-15
Identity = 45/104 (43.27%), Postives = 63/104 (60.58%), Query Frame = 2
Query:  224 DHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVV---LGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            D SL I++ V+  L+   I+  GTQ+ ++ W +  E   V   L  F   ELGHG NV G E   T+D  T +FII+TP   A K+WIGGAA+ ATHT+ +++L
Sbjct:  131 DPSLGIRMLVNIGLFLNCIRGNGTQKQYDFWAKTKEAGKVKQLLRLFRYDELGHGFNVAGCEIFATFDEKTDQFIIDTPHIGATKWWIGGAAHSATHTVCYARL 234          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX_CAEEL (Probable peroxisomal acyl-coenzyme A oxidase OS=Caenorhabditis elegans GN=C48B4.1 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.961e-14
Identity = 37/94 (39.36%), Postives = 52/94 (55.32%), Query Frame = 2
Query:  245 IGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            + +H  ++   IQ        E WL D     ++G +A TELGHG+N+  IET  TYD  T EFII+TP  +A K+W GG     TH ++ + L
Sbjct:  112 LALHNLMFVPTIQNQADDEQTEWWLMDALQGKIIGTYAQTELGHGTNLGAIETTATYDKLTEEFIIHTPTTTATKWWPGGLGTSCTHVVLVANL 205          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX1_PHACI (Peroxisomal acyl-coenzyme A oxidase 1 OS=Phascolarctos cinereus GN=ACOX1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 7.785e-14
Identity = 33/78 (42.31%), Postives = 50/78 (64.10%), Query Frame = 2
Query:  293 TQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            TQ   E++     N  ++G +A TE+GHG+++RG+ET  TYD  T EFI+N+P  ++ K+W GG    + H IV +QL
Sbjct:  116 TQEQQERFFIPAWNLEIIGTYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQL 193          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX2_RABIT (Peroxisomal acyl-coenzyme A oxidase 2 OS=Oryctolagus cuniculus GN=ACOX2 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.046e-13
Identity = 32/84 (38.10%), Postives = 53/84 (63.10%), Query Frame = 2
Query:  275 AIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            A++  G++    KW    + + ++  +A TELGHG+ ++G+ET  TYDA T EF+I++P  +A K+W G     ATH ++ +QL
Sbjct:  125 ALRSLGSEEQIAKWEPLGKTFQIISTYAQTELGHGTYLQGLETEATYDAATQEFVIHSPTVTATKWWPGDLGRSATHALILAQL 208          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX2_HUMAN (Peroxisomal acyl-coenzyme A oxidase 2 OS=Homo sapiens GN=ACOX2 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.591e-13
Identity = 34/84 (40.48%), Postives = 53/84 (63.10%), Query Frame = 2
Query:  275 AIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            A++  G++    KW    +N  ++  +A TELGHG+ ++G+ET  TYDA T EF+I++P  +A K+W G     ATH +V +QL
Sbjct:  125 ALRSLGSEEQIAKWDPLCKNIQIIATYAQTELGHGTYLQGLETEATYDAATQEFVIHSPTLTATKWWPGDLGRSATHALVQAQL 208          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX2_MOUSE (Peroxisomal acyl-coenzyme A oxidase 2 OS=Mus musculus GN=Acox2 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.918e-12
Identity = 32/84 (38.10%), Postives = 52/84 (61.90%), Query Frame = 2
Query:  275 AIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            AI+  G+     KW +  +N+ ++  +A TELGHG+ ++G+ET  TYDA T EF+I++P  ++ K+W G      TH +V + L
Sbjct:  125 AIRSLGSDEQIAKWGQLGKNFQIITTYAQTELGHGTYLQGLETEATYDATTQEFVIHSPTMTSIKWWPGDLGRTVTHAVVLAHL 208          
BLAST of DN617750 vs. ExPASy Swiss-Prot
Match: ACOX2_RAT (Peroxisomal acyl-coenzyme A oxidase 2 OS=Rattus norvegicus GN=Acox2 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.057e-11
Identity = 30/84 (35.71%), Postives = 50/84 (59.52%), Query Frame = 2
Query:  275 AIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 526
            AI+  G+     KW +  +N+ ++  +A TELGHG+ ++G+ET  TYD    E +I++P  ++ K+W G      TH +V +QL
Sbjct:  125 AIRSLGSDEQIAKWGQLCKNFQIITTYAQTELGHGTYLQGLETEATYDEARQELVIHSPTMTSTKWWPGDLGWSVTHAVVLAQL 208          
The following BLAST results are available for this feature:
BLAST of DN617750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
ACOX1_HUMAN4.877e-1638.30Peroxisomal acyl-coenzyme A oxidase 1 OS=Homo sapi... [more]
ACOX1_DROME4.877e-1641.49Probable peroxisomal acyl-coenzyme A oxidase 1 OS=... [more]
ACOX1_DICDI1.853e-1556.06Peroxisomal acyl-coenzyme A oxidase 1 OS=Dictyoste... [more]
ACOX2_CANMA2.420e-1543.27Acyl-coenzyme A oxidase 2 OS=Candida maltosa GN=PO... [more]
ACOX_CAEEL5.961e-1439.36Probable peroxisomal acyl-coenzyme A oxidase OS=Ca... [more]
ACOX1_PHACI7.785e-1442.31Peroxisomal acyl-coenzyme A oxidase 1 OS=Phascolar... [more]
ACOX2_RABIT5.046e-1338.10Peroxisomal acyl-coenzyme A oxidase 2 OS=Oryctolag... [more]
ACOX2_HUMAN6.591e-1340.48Peroxisomal acyl-coenzyme A oxidase 2 OS=Homo sapi... [more]
ACOX2_MOUSE1.918e-1238.10Peroxisomal acyl-coenzyme A oxidase 2 OS=Mus muscu... [more]
ACOX2_RAT8.057e-1135.71Peroxisomal acyl-coenzyme A oxidase 2 OS=Rattus no... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01K06_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001K06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617750 ID=DN617750; Name=DN617750; organism=Citrus sinensis; type=EST; length=526bp
GTTCAATCTCATGGTGCAGAGCAAGCTGTTCAATCCGAGAAAAAGAGGAG
AGAAGGTCTACGTGGCGCCTGATTACAATCAGACGATGGAGCAGCAGCGA
GAGATGACGATGAAGCGAATCTCGTATTTGCTTGAACGCAACGTTTTTGA
AGGATGGCTTACTGCCAAAGGAGCAGAAGCCGAGTTGAGAAAATTAGCGC
TGCTTGAGGTCACCGGAATATTCGACCACTCGCTAGCGATTAAAATCGGT
GTTCACTTCTTTTTATGGGGAGGCGCCATTCAGTTTTTCGGTACACAGCG
CCACCACGAGAAGTGGCTGAGGGACACTGAAAATTATGTGGTCTTGGGTT
GCTTTGCAATGACAGAATTGGGCCACGGAAGTAATGTTCGAGGAATTGAA
ACTGTCACTACATATGATGCAAATACGGGAGAGTTTATCATCAACACCCC
CTGTGAATCAGCTCAGAAGTATTGGATCGGTGGGGCAGCTAATCATGCAA
CGCATACAATCGTCTTTTCACAGCTC
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