DN617744

Overview
NameDN617744
Unique NameDN617744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length467
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617744 vs. ExPASy Swiss-Prot
Match: G3P1_JACOR (Glyceraldehyde-3-phosphate dehydrogenase, muscle OS=Jaculus orientalis PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 4.648e-32
Identity = 75/171 (43.86%), Postives = 94/171 (54.97%), Query Frame = 3
Query:   39 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKD--------------DKT--------------LLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 467
            VK+G+NGFGRIGRLV R       V++VA+NDPFI  +YM YMFKYDS HG++K   + + D              D T              L+     +T+F  R+P +I W + GAEYVVESTGVFT               VIISAPS+DAPMFV+GVN  +Y   L
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFKYDSTHGKFKVDIVAINDPFIDLNYMVYMFKYDSTHGKFKGTVKAENGKLVINGHAITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSRDAPMFVMGVNHEKYDKSL 172          
BLAST of DN617744 vs. ExPASy Swiss-Prot
Match: G3P2_KLULA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluyveromyces lactis GN=GAP2 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 7.929e-32
Identity = 68/142 (47.89%), Postives = 89/142 (62.68%), Query Frame = 3
Query:   39 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPE 464
            V++ INGFGRIGRLV R+ L R +VE+VA+NDPFI+ DY  YMFKYDS HG++        D+ +L+   K V VF  R+P  +PW E   +  ++STGVF                V+I+APS  APMFVVGVNE++Y  E
Sbjct:    2 VRVAINGFGRIGRLVLRIALSRPNVEVVAINDPFISVDYAAYMFKYDSTHGRFAGE--VSHDENSLIIDGKKVLVFQERDPATLPWGEHNVDIAIDSTGVFKELDSAQKHIDAGAKKVVITAPSSTAPMFVVGVNEDKYNGE 141          
BLAST of DN617744 vs. ExPASy Swiss-Prot
Match: G3P1_DROME (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Drosophila melanogaster GN=Gapdh1 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 1.036e-31
Identity = 73/142 (51.41%), Postives = 89/142 (62.68%), Query Frame = 3
Query:   42 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 467
            KIGINGFGRIGRLV R  + +    +VAVNDPFI  +YM Y+FK+DS HG++K       +   L+   + +TVF  R+P  I WA  GAEYVVESTGVFT               VIISAPS DAPMFV GVN + Y P++
Sbjct:    3 KIGINGFGRIGRLVLRAAIDKG-ASVVAVNDPFIDVNYMVYLFKFDSTHGRFKG--TVAAEGGFLVVNGQKITVFSERDPANINWASAGAEYVVESTGVFTTIDKASTHLKGGAKKVIISAPSADAPMFVCGVNLDAYSPDM 141          
BLAST of DN617744 vs. ExPASy Swiss-Prot
Match: G3P_ZYGRO (Glyceraldehyde-3-phosphate dehydrogenase OS=Zygosaccharomyces rouxii PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.352e-31
Identity = 65/142 (45.77%), Postives = 90/142 (63.38%), Query Frame = 3
Query:   39 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPE 464
            V + +NGFGRIGRLV R+ + R D+ LVA+NDPFI+TDY  YMFKYDS HG++   E+    D  +L G+K V VF  ++P  +PW + G +  ++STG+F                V+I+APS  APM+V+GVNE  Y P+
Sbjct:    2 VNVSVNGFGRIGRLVTRIAISRKDINLVAINDPFISTDYAAYMFKYDSTHGRF-DGEVSHDKDHIILNGKK-VAVFNEKDPAALPWGKLGVDVAIDSTGIFKEMDSANKHIEAGAKKVVITAPSGSAPMYVMGVNEETYTPD 141          
BLAST of DN617744 vs. ExPASy Swiss-Prot
Match: G3P_DROHY (Glyceraldehyde-3-phosphate dehydrogenase OS=Drosophila hydei GN=Gapdh1 PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.352e-31
Identity = 73/142 (51.41%), Postives = 92/142 (64.79%), Query Frame = 3
Query:   42 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 467
            KIGINGFGRIGRLV R  + +    +VAVNDPFI  +YM Y+FK+DS HG++K   +  +    ++ G+K +TVF  R+P  I WA  GAEYVVESTGVFT               V+ISAPS DAPMFV GVN + Y P++
Sbjct:    3 KIGINGFGRIGRLVLRAAVDKG-ASVVAVNDPFIDVNYMVYLFKFDSTHGRFKG-TVSAEGGFLVVNGQK-ITVFSERDPANINWASAGAEYVVESTGVFTTTEKASTHLKGGAKKVVISAPSADAPMFVCGVNLDAYSPDM 141          
BLAST of DN617744 vs. ExPASy Swiss-Prot
Match: G3PT_HUMAN (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Homo sapiens GN=GAPDHS PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 1.352e-31
Identity = 68/142 (47.89%), Postives = 96/142 (67.61%), Query Frame = 3
Query:   36 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKP 461
            ++ +GINGFGRIGRLV R  +++  V++VAVNDPFI  +YM YMFKYDS HG++K   ++ ++ + L+     ++V+  + P++IPW   G+ YVVESTGV+                V+ISAPS DAPMFV+GVNEN+Y P
Sbjct:   75 ELTVGINGFGRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYK-GSVEFRNGQ-LVVDNHEISVYQCKEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPDAPMFVMGVNENDYNP 213          
BLAST of DN617744 vs. ExPASy Swiss-Prot
Match: G3P1_CANGA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Candida glabrata GN=GPD1 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.766e-31
Identity = 62/143 (43.36%), Postives = 91/143 (63.64%), Query Frame = 3
Query:   39 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 467
            V++ INGFGRIGR+V R+ ++RD +++VA+NDPFIT DY  YMFKYDS HG++        DDK L+   K +  +  R+P ++PW +   + V+E+TGVFT               V+I+ PS  APMFV GVN+++Y  ++
Sbjct:    2 VRVAINGFGRIGRIVLRIAMKRDGIDVVAINDPFITNDYAAYMFKYDSTHGRYDGE--VTHDDKDLIIDGKAIKCYQERDPADLPWGDNDIDIVIEATGVFTAKDLAEKHITAGAKKVVITGPSATAPMFVKGVNDDKYTSDV 142          
BLAST of DN617744 vs. ExPASy Swiss-Prot
Match: G3P1_AGABI (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Agaricus bisporus GN=gpd1 PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.307e-31
Identity = 68/142 (47.89%), Postives = 91/142 (64.08%), Query Frame = 3
Query:   39 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPE 464
            V +GINGFGRIGRLV R  LQ   + +VAVNDPF+  +YM Y+FKYDSVHG+++  +++ KD K ++ G K +  F  R P  I WA+ GAEY+VESTGVF                V+I+AP    P +VVGVN ++Y P+
Sbjct:    2 VNVGINGFGRIGRLVLRNALQMQILTVVAVNDPFLDVEYMAYLFKYDSVHGRYQ-GKVETKDGKLIIDGHK-IAAFAEREPANIKWADCGAEYIVESTGVFKTEELAKEHLKGGAKKVVITAPGSGVPTYVVGVNLDKYDPK 141          
BLAST of DN617744 vs. ExPASy Swiss-Prot
Match: G3P_ASHGO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ashbya gossypii GN=GPD PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 3.013e-31
Identity = 68/142 (47.89%), Postives = 88/142 (61.97%), Query Frame = 3
Query:   39 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPE 464
            VK+ ING G+IGRLV R+ L R +VE+VA+NDPFIT DY  YMFKYDS HG  K+      +  TL+   K + VF  R+P ++PW E G +  ++STGVF                V+I+APS  APMFV+GVNE +Y  E
Sbjct:    2 VKVAINGLGKIGRLVMRIALSRANVEVVAINDPFITVDYAAYMFKYDSTHG--KYAGDVQYEGNTLVIDGKKIKVFQERDPAQLPWGEEGIDIAIDSTGVFKELDSAQKHIDAGAKKVVITAPSSTAPMFVMGVNEEKYAGE 141          
BLAST of DN617744 vs. ExPASy Swiss-Prot
Match: G3P3_YEAST (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Saccharomyces cerevisiae GN=TDH3 PE=1 SV=3)

HSP 1 Score: 134.035 bits (336), Expect = 3.013e-31
Identity = 65/143 (45.45%), Postives = 88/143 (61.54%), Query Frame = 3
Query:   39 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 467
            V++ INGFGRIGRLV R+ L R +VE+VA+NDPFIT DY  YMFKYDS HG++        DDK ++   K +  +  R+P  +PW  +  +  ++STGVF                V+I+APS  APMFV+GVNE +Y  +L
Sbjct:    2 VRVAINGFGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYAGE--VSHDDKHIIVDGKKIATYQERDPANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSSTAPMFVMGVNEEKYTSDL 142          
The following BLAST results are available for this feature:
BLAST of DN617744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 312
Match NameE-valueIdentityDescription
G3P1_JACOR4.648e-3243.86Glyceraldehyde-3-phosphate dehydrogenase, muscle O... [more]
G3P2_KLULA7.929e-3247.89Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluy... [more]
G3P1_DROME1.036e-3151.41Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Dros... [more]
G3P_ZYGRO1.352e-3145.77Glyceraldehyde-3-phosphate dehydrogenase OS=Zygosa... [more]
G3P_DROHY1.352e-3151.41Glyceraldehyde-3-phosphate dehydrogenase OS=Drosop... [more]
G3PT_HUMAN1.352e-3147.89Glyceraldehyde-3-phosphate dehydrogenase, testis-s... [more]
G3P1_CANGA1.766e-3143.36Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Cand... [more]
G3P1_AGABI2.307e-3147.89Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Agar... [more]
G3P_ASHGO3.013e-3147.89Glyceraldehyde-3-phosphate dehydrogenase OS=Ashbya... [more]
G3P3_YEAST3.013e-3145.45Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Sacc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01K03_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001K03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617744 ID=DN617744; Name=DN617744; organism=Citrus sinensis; type=EST; length=467bp
ACCGCTCAATTTCATCGTCTCGAGAATCATCGGGGAAGGTCAAGATCGGA
ATCAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCA
GAGGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCACAACCG
ATTACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAG
CACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAA
GCCTGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTG
AGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACTGACAAG
GATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTC
AGCCCCCAGCAAGGATGCTCCTATGTTTGTTGTCGGTGTCAATGAAAACG
AGTACAAACCAGAGCTC
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