DN617744

Overview
NameDN617744
Unique NameDN617744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length467
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1066 contig Csv1_Contig1066:354..820. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617744 vs. ExPASy Swiss-Prot
Match: G3P_ASPOR (Glyceraldehyde-3-phosphate dehydrogenase OS=Aspergillus oryzae GN=gpdA PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 5.491e-33
Identity = 72/142 (50.70%), Postives = 92/142 (64.79%), Query Frame = 3
Query:   42 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 467
            K+GINGFGRIGR+V R  +   DV++VAVNDPFI T Y  YM KYDS HG+++   ++  D+  ++ G+K +  F  R+P  IPW   GA Y+VESTGVFT               VIISAPS DAPMFV+GVN  EYK ++
Sbjct:    5 KVGINGFGRIGRIVFRNAIASGDVDVVAVNDPFIETHYAAYMLKYDSTHGRFQG-TIETYDEGLIVNGKK-IRFFAERDPAAIPWGSAGAAYIVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNNKEYKTDI 144          
BLAST of DN617744 vs. ExPASy Swiss-Prot
Match: G3PT_DANRE (Glyceraldehyde 3-phosphate dehydrogenase, testis-specific OS=Danio rerio GN=gapdhs PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 5.491e-33
Identity = 71/139 (51.08%), Postives = 94/139 (67.63%), Query Frame = 3
Query:   45 IGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKP 461
            +GINGFGRIGRLV R  LQ+  +++ A+NDPFI   YM YMFKYDS HG++K  E+ ++D K ++ G+  ++VF    P EIPW + GA YVVESTGVF                V++SAPS DAPMFV+GVN+++Y P
Sbjct:    6 VGINGFGRIGRLVLRACLQKG-IKVTAINDPFIDLQYMVYMFKYDSTHGRYK-GEVHMEDGKLIVDGQ-AISVFQCMKPAEIPWGDAGALYVVESTGVFLSIEKASAHIQGGAKRVVVSAPSPDAPMFVMGVNQDKYDP 141          
BLAST of DN617744 vs. ExPASy Swiss-Prot
Match: G3P_SORMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Sordaria macrospora GN=GPD PE=3 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 7.172e-33
Identity = 71/139 (51.08%), Postives = 92/139 (66.19%), Query Frame = 3
Query:   39 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEY 455
            VK+GINGFGRIGR+V R  ++ DD+++VAVNDPFI   Y  YM +YDS HG +K   + V+    ++ G+K V  +  R+P  IPW+ETGA+Y+VESTGVFT               VIISAPS DAPM+V+GVN   Y
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHDDIQIVAVNDPFIEPKYAEYMLRYDSTHGNFK-GTIAVEGSDLVVNGKK-VKFYTERDPSAIPWSETGADYIVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMYVMGVNNESY 139          
BLAST of DN617744 vs. ExPASy Swiss-Prot
Match: G3P2_CANGA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Candida glabrata GN=GPD2 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 7.172e-33
Identity = 70/143 (48.95%), Postives = 89/143 (62.24%), Query Frame = 3
Query:   39 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 467
            V+I INGFGRIGRLV RV L R ++E+VAVNDPFITTDY  YMFKYDS HG++        DDK ++   K + V   R+P  +PW     +  ++STGVF                V+I+APS  APMFVVGVNE++Y  +L
Sbjct:    2 VRIAINGFGRIGRLVLRVALSRSNIEVVAVNDPFITTDYAAYMFKYDSTHGRYAGE--VTHDDKHIIIDGKKIAVHQERDPANLPWGSENIDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSSTAPMFVVGVNEDKYTSDL 142          
BLAST of DN617744 vs. ExPASy Swiss-Prot
Match: G3P2_CAEBR (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Caenorhabditis briggsae GN=gpd-2 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 7.172e-33
Identity = 73/144 (50.69%), Postives = 93/144 (64.58%), Query Frame = 3
Query:   36 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGE----KPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEY 455
            K  +GINGFGRIGRLV R  +++D V +VAVNDPFI+ DYM Y+F+YDS HG++K   +K + D  ++  E      + V+  ++P EI W   GA+YVVESTGVFT               VIISAPS DAPMFVVGVN  +Y
Sbjct:    3 KPTVGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFK-GTVKHEGDYLIVANEGKSQHKIKVYNSKDPAEIQWGAAGADYVVESTGVFTTIEKANAHLKGGAKKVIISAPSADAPMFVVGVNHEKY 145          
BLAST of DN617744 vs. ExPASy Swiss-Prot
Match: G3P_PODAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Podospora anserina GN=GPD PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 9.366e-33
Identity = 74/139 (53.24%), Postives = 90/139 (64.75%), Query Frame = 3
Query:   39 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEY 455
            VK+GINGFGRIGR+V R  ++  DVE+VAVNDPFI   Y  YM KYDS HG +K   ++V     ++ G K V  +  R+P  IPW +TGAEY+VESTGVFT               VIISAPS DAPM+V+GVNE  Y
Sbjct:    3 VKVGINGFGRIGRIVFRNAVEHPDVEIVAVNDPFIEPKYAEYMLKYDSTHGVFK-GTIQVSGSDLIVNG-KTVKFYTERDPSAIPWKDTGAEYIVESTGVFTTTEKASAHLKGGAKRVIISAPSADAPMYVMGVNEKTY 139          
BLAST of DN617744 vs. ExPASy Swiss-Prot
Match: G3P2_SCHPO (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Schizosaccharomyces pombe GN=gpd3 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 9.366e-33
Identity = 72/140 (51.43%), Postives = 92/140 (65.71%), Query Frame = 3
Query:   42 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKP 461
            K+GINGFGRIGR+V R  +    +++VAVNDPFI  DYM YMFKYDS HG+++   ++ K  K ++ G   + V   R+P  I W+ +GAEYV+ESTGVFT               VIISAPSKDAPMFVVGVN  ++ P
Sbjct:    5 KVGINGFGRIGRIVLRNAILTGKIQVVAVNDPFIDLDYMAYMFKYDSTHGRFE-GSVETKGGKLVIDGHS-IDVHNERDPANIKWSASGAEYVIESTGVFTTKETASAHLKGGAKRVIISAPSKDAPMFVVGVNLEKFNP 142          
BLAST of DN617744 vs. ExPASy Swiss-Prot
Match: G3P1_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluyveromyces marxianus GN=GAP1 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 9.366e-33
Identity = 69/142 (48.59%), Postives = 90/142 (63.38%), Query Frame = 3
Query:   39 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPE 464
            V I INGFGRIGRLV R+ L+R ++++VA+NDPFI+ DY  YMFKYDS HG++K       D   L+   K V VF  ++P  +PW + G +  V+STGVF                V+I+APSK APMFVVGVNE++Y  E
Sbjct:    2 VSIAINGFGRIGRLVLRIALERKNIDVVAINDPFISVDYAAYMFKYDSTHGKYKGE--VSHDGSNLIINGKKVAVFQEKDPATLPWGKLGVDIAVDSTGVFKELDSAQKHIDAGAKKVVITAPSKTAPMFVVGVNEDKYNGE 141          
BLAST of DN617744 vs. ExPASy Swiss-Prot
Match: G3P_ASPNG (Glyceraldehyde-3-phosphate dehydrogenase OS=Aspergillus niger GN=gpdA PE=3 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 1.223e-32
Identity = 70/142 (49.30%), Postives = 92/142 (64.79%), Query Frame = 3
Query:   42 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 467
            K+GINGFGRIGR+V R  +   +V++VAVNDPFI T Y  YM KYDS HGQ+K   ++  ++  ++ G+K +  F  R+P  IPW  TGA+Y+VESTGVFT               V+ISAPS DAPMFV+GVN   Y  ++
Sbjct:    4 KVGINGFGRIGRIVFRNAINHGEVDVVAVNDPFIETHYAAYMLKYDSTHGQFK-GTIETYEEGLIVNGKK-IRFFAERDPAAIPWGTTGADYIVESTGVFTTQEKAAAHLKGGAKKVVISAPSADAPMFVMGVNNTSYTKDI 143          
BLAST of DN617744 vs. ExPASy Swiss-Prot
Match: G3P_TRIAT (Glyceraldehyde-3-phosphate dehydrogenase OS=Trichoderma atroviride GN=gpd1 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 2.087e-32
Identity = 70/139 (50.36%), Postives = 92/139 (66.19%), Query Frame = 3
Query:   39 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEY 455
            +K+GINGFGRIGR++    L++ ++ +VAVNDPFI   Y  YM KYDS HG +K  +++V D + L+   KP+  +  R+P  I W+ETGAEY+VESTGVFT               VIISAPS DAPMFV+GVN  +Y
Sbjct:    3 IKVGINGFGRIGRILLSNALEKPELSVVAVNDPFIEPTYAAYMLKYDSSHGLFKG-DIEV-DGQNLVVNGKPIRFYSERDPANIKWSETGAEYIVESTGVFTTIDKAKAHLNGGAKKVIISAPSADAPMFVMGVNHKDY 139          
The following BLAST results are available for this feature:
BLAST of DN617744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 312
Match NameE-valueIdentityDescription
G3P_ASPOR5.491e-3350.70Glyceraldehyde-3-phosphate dehydrogenase OS=Asperg... [more]
G3PT_DANRE5.491e-3351.08Glyceraldehyde 3-phosphate dehydrogenase, testis-s... [more]
G3P_SORMA7.172e-3351.08Glyceraldehyde-3-phosphate dehydrogenase OS=Sordar... [more]
G3P2_CANGA7.172e-3348.95Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Cand... [more]
G3P2_CAEBR7.172e-3350.69Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Caen... [more]
G3P_PODAN9.366e-3353.24Glyceraldehyde-3-phosphate dehydrogenase OS=Podosp... [more]
G3P2_SCHPO9.366e-3351.43Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Schi... [more]
G3P1_KLUMA9.366e-3348.59Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluy... [more]
G3P_ASPNG1.223e-3249.30Glyceraldehyde-3-phosphate dehydrogenase OS=Asperg... [more]
G3P_TRIAT2.087e-3250.36Glyceraldehyde-3-phosphate dehydrogenase OS=Tricho... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01K03_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001K03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617744 ID=DN617744; Name=DN617744; organism=Citrus sinensis; type=EST; length=467bp
ACCGCTCAATTTCATCGTCTCGAGAATCATCGGGGAAGGTCAAGATCGGA
ATCAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCA
GAGGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCACAACCG
ATTACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAG
CACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAA
GCCTGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTG
AGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACTGACAAG
GATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTC
AGCCCCCAGCAAGGATGCTCCTATGTTTGTTGTCGGTGTCAATGAAAACG
AGTACAAACCAGAGCTC
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