DN617742
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617742 vs. ExPASy Swiss-Prot
Match: S13A1_RAT (Solute carrier family 13 member 1 OS=Rattus norvegicus GN=Slc13a1 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.081e-13 Identity = 33/83 (39.76%), Postives = 54/83 (65.06%), Query Frame = -3 Query: 292 SNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPT 540 SN AT T++ P+L +A+ +HV+PL +++P + F+FLLP P N + F+ GH+++ DM+K GL + I G+A + M T Sbjct: 489 SNPATITILFPILSPLAEAIHVNPLHILLPSTLCTSFAFLLPVANPPNAIVFSYGHLKVIDMVKAGLGVNILGVAVVMLGMFT 571
BLAST of DN617742 vs. ExPASy Swiss-Prot
Match: S13A2_RABIT (Solute carrier family 13 member 2 OS=Oryctolagus cuniculus GN=SLC13A2 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.551e-12 Identity = 32/89 (35.96%), Postives = 55/89 (61.80%), Query Frame = -3 Query: 274 SNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPTLGAYVF 540 SN ATTTL+LP+L +A+ + +HPL +M+P + + +F+LP TP N + F+ G + + DM + G+ L I G+ + + + G +F Sbjct: 478 SNAATTTLLLPILASMAQAICLHPLYVMLPCTLASSLAFMLPVATPPNAIVFSFGGLRVSDMARAGIMLNIIGVLVIMLAINSWGVPMF 566
BLAST of DN617742 vs. ExPASy Swiss-Prot
Match: S13A1_MOUSE (Solute carrier family 13 member 1 OS=Mus musculus GN=Slc13a1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.645e-12 Identity = 32/83 (38.55%), Postives = 53/83 (63.86%), Query Frame = -3 Query: 292 SNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPT 540 SN AT T++ P+L +A+ + V+PL +++P + F+FLLP P N + F+ GH+++ DM+K GL + I G+A + M T Sbjct: 488 SNPATITILFPILSPLAEAIQVNPLQILLPSTLCTSFAFLLPVANPPNAIVFSYGHLKVIDMVKAGLGVNILGVAVVMLGMFT 570
BLAST of DN617742 vs. ExPASy Swiss-Prot
Match: S13A2_RAT (Solute carrier family 13 member 2 OS=Rattus norvegicus GN=Slc13a2 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 3.455e-12 Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = -3 Query: 265 SNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPTLGAYVFGTD 540 SN ATTTL LP+L +A+ + +HPL +M+P + A +F+LP TP N + F+ G +++ DM + G L I G+ A + + +F D Sbjct: 470 SNVATTTLFLPILASMAQAICLHPLYVMLPCTLAASLAFMLPVATPPNAIVFSFGGLKVSDMARAGFLLNIIGVLATTLSINSWSIPIFKLD 561
BLAST of DN617742 vs. ExPASy Swiss-Prot
Match: S13A2_MOUSE (Solute carrier family 13 member 2 OS=Mus musculus GN=Slc13a2 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.512e-12 Identity = 33/92 (35.87%), Postives = 54/92 (58.70%), Query Frame = -3 Query: 265 SNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPTLGAYVFGTD 540 SN ATTTL LP+L +A+ + +HPL +M+P + A +F+LP TP N + F+ G +++ DM + G L I G+ + + + +F D Sbjct: 470 SNVATTTLFLPILASMAQAICLHPLYVMLPCTLAASLAFMLPVATPPNAIVFSFGGLKVSDMARAGFLLNIIGVLTITLSINSWSIPIFKLD 561
BLAST of DN617742 vs. ExPASy Swiss-Prot
Match: S13A2_HUMAN (Solute carrier family 13 member 2 OS=Homo sapiens GN=SLC13A2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.697e-12 Identity = 32/89 (35.96%), Postives = 54/89 (60.67%), Query Frame = -3 Query: 274 SNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPTLGAYVF 540 SN ATTT+ LP+L +A+ + +HPL +M+P + +F+LP TP N + F+ G +++ DM + G L I G+ +A + + G +F Sbjct: 475 SNVATTTIFLPILASMAQAICLHPLYVMLPCTLATSLAFMLPVATPPNAIVFSFGDLKVLDMARAGFLLNIIGVLIIALAINSWGIPLF 563
BLAST of DN617742 vs. ExPASy Swiss-Prot
Match: SDCS_STAAR (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain MRSA252) GN=sdcS PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.239e-11 Identity = 33/92 (35.87%), Postives = 52/92 (56.52%), Query Frame = -3 Query: 265 SNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPTLGAYVFGTD 540 SN AT T++LP+L ++ + VHPLLLM P A+ A +++LP GTP N + F +G I I+ M G + + + ++ + V G D Sbjct: 421 SNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVGFWVNLISAIIIILVVYYIMPIVLGID 512
BLAST of DN617742 vs. ExPASy Swiss-Prot
Match: SDCS_STAAW (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain MW2) GN=sdcS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.925e-11 Identity = 33/92 (35.87%), Postives = 52/92 (56.52%), Query Frame = -3 Query: 265 SNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPTLGAYVFGTD 540 SN AT T++LP+L ++ + VHPLLLM P A+ A +++LP GTP N + F +G I I+ M G + + + ++ + V G D Sbjct: 421 SNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVGFWVNLISAIIIILVVYYVMPIVLGID 512
BLAST of DN617742 vs. ExPASy Swiss-Prot
Match: SDCS_STAAS (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain MSSA476) GN=sdcS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.925e-11 Identity = 33/92 (35.87%), Postives = 52/92 (56.52%), Query Frame = -3 Query: 265 SNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPTLGAYVFGTD 540 SN AT T++LP+L ++ + VHPLLLM P A+ A +++LP GTP N + F +G I I+ M G + + + ++ + V G D Sbjct: 421 SNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVGFWVNLISAIIIILVVYYVMPIVLGID 512
BLAST of DN617742 vs. ExPASy Swiss-Prot
Match: SDCS_STAAN (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain N315) GN=sdcS PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.925e-11 Identity = 33/92 (35.87%), Postives = 52/92 (56.52%), Query Frame = -3 Query: 265 SNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPTLGAYVFGTD 540 SN AT T++LP+L ++ + VHPLLLM P A+ A +++LP GTP N + F +G I I+ M G + + + ++ + V G D Sbjct: 421 SNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVGFWVNLISAIIIILVVYYVMPIVLGID 512 The following BLAST results are available for this feature:
BLAST of DN617742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617742 ID=DN617742; Name=DN617742; organism=Citrus sinensis; type=EST; length=542bpback to top |