DN617732

Overview
NameDN617732
Unique NameDN617732
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length480
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN617732 vs. ExPASy Swiss-Prot
Match: ULA1_XENLA (NEDD8-activating enzyme E1 regulatory subunit OS=Xenopus laevis GN=nae1 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.359e-11
Identity = 29/53 (54.72%), Postives = 40/53 (75.47%), Query Frame = -2 
Query:  300 TLTEDLINEMCRFGAAELHAVAAFIGGVASQEVIKLITKQFVPMCGTFIFNGI 458
            T+ ++ I E CR+GAAE H +A+F+GG A+QE IK+ITKQFV    TFI+N +
Sbjct:  472 TVKDEYIQEFCRYGAAEPHTIASFLGGAAAQEAIKIITKQFVIFNNTFIYNAM 524
The following BLAST results are available for this feature:
BLAST of DN617732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
ULA1_XENLA8.359e-1154.72NEDD8-activating enzyme E1 regulatory subunit OS=X... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01J21_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001J21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617732 ID=DN617732; Name=DN617732; organism=Citrus sinensis; type=EST; length=480bp
CCGGGAGAATCCAACTCCACGAAAATCACTCTGATATTCTTTAGTAAGTC
TGTCTTTACACGAAGATGAAGTGGTGATAACTAATAATTTCCAGAACTTC
ATCAAACTAAATGATGTGCCCCTCTCGTTACAATGCAAAGAATGCCTCAA
TTCATGAAATGTCATAAATGACATGAAAAGGAAAAAAAGGCTGTGGATCT
CCAGAAGATTGGTACTACATCACATGAACATAGTATCGGTTAATTCAGCA
TTCACAGCATCAAATTCCATCAAAGTGTCAACAATTGCGACTTATGATCA
ATGCCATTGAAGATGAATGTCCCACACATAGGAACAAACTGTTTTGTAAT
GAGCTTAATGACTTCCTGCGAGGCAACTCCTCCAATGAAGGCAGCAACAG
CATGGAGCTCTGCTGCACCAAAGCGACACATCTCGTTGATAAGATCCTCA
GTCAATGTTGAACCATTGCAGCCCAAGTCA
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