DN617731

Overview
NameDN617731
Unique NameDN617731
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length726
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGAL3_ARATH (Beta-galactosidase 3 OS=Arabidopsis thaliana GN=BGAL3 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.862e-25
Identity = 65/154 (42.21%), Postives = 82/154 (53.25%), Query Frame = 3
Query:  252 DGEPFQIIGGDLHYFRILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSD---RAYLQLVERWWGVLLPKIAPLLYDIGGPIVMVQIENEFGSYG 704
            +G+   +  G +HY R  P  WED + +AK  G++ I+TYV WNLHEP PGK  F G  DLV F+K   K  L   LR GPY+CAEW+ GGF               ++   RA     ER   V L K   L    GGPI++ QIENE+G  G
Sbjct:   43 NGQRRILFSGSIHYPRSTPDMWEDLIQKAKDGGIDVIETYVFWNLHEPSPGKYDFEGRNDLVRFVKTIHKAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNEPFKRAMKGFTERI--VELMKSENLFESQGGPIILSQIENEYGRQG 194          
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGAL1_ARATH (Beta-galactosidase 1 OS=Arabidopsis thaliana GN=BGAL1 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.293e-25
Identity = 62/144 (43.06%), Postives = 83/144 (57.64%), Query Frame = 3
Query:  270 IIGGDLHYFRILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSDRAYLQLVERWWG--VLLPKIAPLLYDIGGPIVMVQIENEFG 695
            +I G +HY R  P+ W D + +AK  GL+ IQTYV WN HEP PGK  F G  DLV F+KL Q+  L + LR GPY+CAEW+ GGF             R+ +  +   ++R+    V + K   L    GGPI++ QIENE+G
Sbjct:   50 LISGSIHYPRSTPEMWPDLIRKAKEGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFVKLVQQSGLYLHLRIGPYVCAEWNFGGF-PVWLKYIPGISFRTDNGPFKAQMQRFTTKIVNMMKAERLFESQGGPIILSQIENEYG 192          
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGAL_MALDO (Beta-galactosidase OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.848e-24
Identity = 62/150 (41.33%), Postives = 84/150 (56.00%), Query Frame = 3
Query:  252 DGEPFQIIGGDLHYFRILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSDRAYLQLVERWWG--VLLPKIAPLLYDIGGPIVMVQIENEFG 695
            +G+   +I G +HY R  P+ W D + +AK  GL+ IQTYV WN HEP PG   F    DLV F+KL Q+  L V LR GPY+CAEW+ GGF             R+ +  +   ++++    V + K   L    GGPI++ QIENEFG
Sbjct:   36 NGQKRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGNYYFEERYDLVKFIKLVQQEGLFVNLRIGPYVCAEWNFGGF-PVWLKYVPGIAFRTDNEPFKAAMQKFTEKIVSMMKAEKLFQTQGGPIILSQIENEFG 184          
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGA13_ARATH (Beta-galactosidase 13 OS=Arabidopsis thaliana GN=BGAL13 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.116e-24
Identity = 64/145 (44.14%), Postives = 84/145 (57.93%), Query Frame = 3
Query:  270 IIGGDLHYFRILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSDRAYLQLVERWWGVLLP--KIAPLLYDIGGPIVMVQIENEFGS 698
            +  G +HY R  P+ W + + RAK  GLNTIQTYV WN+HEP+ GK  FSG ADLV F+KL +K  L V LR GP+I AEW  GG              R+ +  + +  ER+  V+L   K   L    GGPI++ QIENE+ +
Sbjct:   60 LYSGSIHYPRSTPEMWPNIIKRAKQGGLNTIQTYVFWNVHEPEQGKFNFSGRADLVKFIKLIEKNGLYVTLRLGPFIQAEWTHGGL-PYWLREVPGIFFRTDNEPFKEHTERYVKVVLDMMKEEKLFASQGGPIILGQIENEYSA 203          
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGAL5_ORYSJ (Beta-galactosidase 5 OS=Oryza sativa subsp. japonica GN=Os03g0165400 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.198e-23
Identity = 62/156 (39.74%), Postives = 82/156 (52.56%), Query Frame = 3
Query:  252 DGEPFQIIGGDLHYFRILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSD---RAYLQLVERWWGVLLPKIAPLLYDIGGPIVMVQIENEFGSYGDD 710
            DG+   +  G +HY R  P+ W+  + +AK  GL+ IQTYV WN HEP PG   F G  DLV F+K  QK  + V LR GPYIC EW+ GGF               ++    A     E+  G++  K   L    GGPI++ QIENE+G  G +
Sbjct:   37 DGQRRILFSGSIHYPRSTPEMWDGLIEKAKDGGLDVIQTYVFWNGHEPTPGNYNFEGRYDLVRFIKTVQKAGMFVHLRIGPYICGEWNFGGFPVWLKYVPGISFRTDNEPFKNAMQGFTEKIVGMM--KSENLFASQGGPIILSQIENEYGPEGKE 190          
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGAL2_ORYSJ (Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.198e-23
Identity = 61/150 (40.67%), Postives = 86/150 (57.33%), Query Frame = 3
Query:  252 DGEPFQIIGGDLHYFRILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSDRAYLQLVERWWG--VLLPKIAPLLYDIGGPIVMVQIENEFG 695
            +G+   +I G +HY R  P+ W D + +AK  GL+ +QTYV WN HEP PG+  F G  DLV F+KL ++  L V LR GPY+CAEW+ GGF             R+ +  +   ++++    V + K   L    GGPI++ QIENEFG
Sbjct:   36 NGQRRILISGSIHYPRSTPEMWPDLIEKAKDGGLDVVQTYVFWNGHEPSPGQYYFEGRYDLVHFIKLVKQAGLYVNLRIGPYVCAEWNFGGF-PVWLKYVPGISFRTDNEPFKAEMQKFTTKIVEMMKSEGLFEWQGGPIILSQIENEFG 184          
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGA12_ARATH (Beta-galactosidase 12 OS=Arabidopsis thaliana GN=BGAL12 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.043e-23
Identity = 59/150 (39.33%), Postives = 85/150 (56.67%), Query Frame = 3
Query:  252 DGEPFQIIGGDLHYFRILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSDRAYLQLVERWWG--VLLPKIAPLLYDIGGPIVMVQIENEFG 695
            +G+   ++ G +HY R  P+ W D + +AK  GL+ IQTYV WN HEP PG+  F    DLV F+K+ Q+  L V LR GPY+CAEW+ GGF             R+ +  +   ++++    V + K   L    GGPI++ QIENE+G
Sbjct:   39 NGQRRILLSGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGQYYFEDRYDLVKFIKVVQQAGLYVHLRIGPYVCAEWNFGGF-PVWLKYVPGMVFRTDNEPFKAAMQKFTEKIVRMMKEEKLFETQGGPIILSQIENEYG 187          
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGAL_ASPOF (Beta-galactosidase OS=Asparagus officinalis PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.668e-23
Identity = 61/150 (40.67%), Postives = 84/150 (56.00%), Query Frame = 3
Query:  252 DGEPFQIIGGDLHYFRILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSDRAYLQLVERWWG--VLLPKIAPLLYDIGGPIVMVQIENEFG 695
            +G+   +I G +HY R  P+ W D + +AK  GL+ IQTYV WN HEP PG+  F G  DLV FLKL ++  L   LR GPY+CAEW+ GGF             R+ +  +   + ++    V + K   L    GGPI++ QIENE+G
Sbjct:   37 NGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGQYYFGGRYDLVRFLKLVKQAGLYAHLRIGPYVCAEWNFGGF-PVWLKYVPGIHFRTDNGPFKAAMGKFTEKIVSMMKAEGLYETQGGPIILSQIENEYG 185          
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGAL_SOLLC (Beta-galactosidase OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.762e-23
Identity = 59/150 (39.33%), Postives = 88/150 (58.67%), Query Frame = 3
Query:  252 DGEPFQIIGGDLHYFRILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSDRAYLQLVERWWGVLLPKI-APLLYDI-GGPIVMVQIENEFG 695
            +G+   +I G +HY R  P+ W D + +AK  G++ IQTYV WN HEP+ GK  F    DLV F+K+ Q+  L V LR GPY CAEW+ GGF             R+++  +   ++++   ++  + A  LY+  GGPI++ QIENE+G
Sbjct:   34 NGQRKILISGSIHYPRSTPEMWPDLIQKAKEGGVDVIQTYVFWNGHEPEEGKYYFEERYDLVKFIKVVQEAGLYVHLRIGPYACAEWNFGGF-PVWLKYVPGISFRTNNEPFKAAMQKFTTKIVDMMKAEKLYETQGGPIILSQIENEYG 182          
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGAL8_ARATH (Beta-galactosidase 8 OS=Arabidopsis thaliana GN=BGAL8 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.324e-22
Identity = 60/151 (39.74%), Postives = 86/151 (56.95%), Query Frame = 3
Query:  252 DGEPFQIIGGDLHYFRILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSDRAYLQLVERWWG--VLLPKIAPLLYDIGGPIVMVQIENEFGS 698
            DG+   +I G +HY R  P+ W + + ++K  GL+ I+TYV W+ HEP+  K  F G  DLV F+KL  K  L V LR GPY+CAEW+ GGF             R+ +  + + ++R+    V L K   L    GGPI++ QIENE+G+
Sbjct:   42 DGKRKVLISGSIHYPRSTPEMWPELIQKSKDGGLDVIETYVFWSGHEPEKNKYNFEGRYDLVKFVKLAAKAGLYVHLRIGPYVCAEWNYGGF-PVWLHFVPGIKFRTDNEPFKEEMQRFTTKIVDLMKQEKLYASQGGPIILSQIENEYGN 191          
The following BLAST results are available for this feature:
BLAST of DN617731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
BGAL3_ARATH4.862e-2542.21Beta-galactosidase 3 OS=Arabidopsis thaliana GN=BG... [more]
BGAL1_ARATH8.293e-2543.06Beta-galactosidase 1 OS=Arabidopsis thaliana GN=BG... [more]
BGAL_MALDO1.848e-2441.33Beta-galactosidase OS=Malus domestica PE=1 SV=1[more]
BGA13_ARATH4.116e-2444.14Beta-galactosidase 13 OS=Arabidopsis thaliana GN=B... [more]
BGAL5_ORYSJ1.198e-2339.74Beta-galactosidase 5 OS=Oryza sativa subsp. japoni... [more]
BGAL2_ORYSJ1.198e-2340.67Beta-galactosidase 2 OS=Oryza sativa subsp. japoni... [more]
BGA12_ARATH2.043e-2339.33Beta-galactosidase 12 OS=Arabidopsis thaliana GN=B... [more]
BGAL_ASPOF2.668e-2340.67Beta-galactosidase OS=Asparagus officinalis PE=2 S... [more]
BGAL_SOLLC7.762e-2339.33Beta-galactosidase OS=Solanum lycopersicum PE=1 SV... [more]
BGAL8_ARATH1.324e-2239.74Beta-galactosidase 8 OS=Arabidopsis thaliana GN=BG... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01J20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001J20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617731 ID=DN617731; Name=DN617731; organism=Citrus sinensis; type=EST; length=726bp
GAGAGTCAACGACGACGATGACAGTCAAACGCGCGATGGCGACAATGCGA
AGGCGGAGCACCGCCACCACCAATACGACGTTGTTCCTCACCGTTTTGAT
ATCGCTCTTGGCCTTTCTTGGCTTCGTCCCTGTCTTCGCTCCCCTCCCTT
CTCTCGCCTTCCGCAATCCTCCTCCTCCTCCTCACCACCGTCATCGCCAC
AATAACGTGAATGGTCGAAAGTTTGAGATTGAGGATGACATGTTCCGGAA
AGATGGTGAGCCATTTCAGATTATTGGTGGTGACCTGCATTATTTCCGCA
TTCTCCCTCAGCACTGGGAAGATAGGCTTTTGCGAGCAAAGGCTTTAGGC
TTGAATACCATTCAAACTTATGTTCCTTGGAATCTGCATGAACCAAAACC
TGGCAAGCTGGTTTTTAGTGGCATTGCAGATCTTGTTTCATTTCTTAAAC
TTTGTCAGAAGCTGGATTTGCTTGTTATGCTTCGACCTGGGCCTTATATA
TGTGCAGAGTGGGATTTGGGGGGTTTCCCTGCTTGGTTACTTGCCAAAAA
GCCGGCTCTCAAGCTAAGGTCATCTGATCGTGCTTACCTTCAGTTGGTTG
AAAGATGGTGGGGAGTCCTACTTCCGAAAATAGCTCCTCTGCTTTATGAC
ATTGGAGGCCCAATTGTAATGGTTCAGATTGAAAATGAATTTGGTTCGTA
TGGAGATGACAAAGAGTATCTTCATC
back to top