DN617731

Overview
NameDN617731
Unique NameDN617731
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length726
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGAL4_ARATH (Beta-galactosidase 4 OS=Arabidopsis thaliana GN=BGAL4 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.324e-22
Identity = 57/150 (38.00%), Postives = 83/150 (55.33%), Query Frame = 3
Query:  252 DGEPFQIIGGDLHYFRILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSDRAYLQLVERWWG--VLLPKIAPLLYDIGGPIVMVQIENEFG 695
            +G+   ++ G +HY R  P+ W   + +AK  GL+ I+TYV WN HEP PG+  F    DLV F+KL  +  L V LR GPY+CAEW+ GGF             R+ +  +   ++++    V + K   L    GGPI++ QIENE+G
Sbjct:   39 NGQRRILLSGSIHYPRSTPEMWPGLIQKAKEGGLDVIETYVFWNGHEPSPGQYYFGDRYDLVKFIKLVHQAGLYVNLRIGPYVCAEWNFGGF-PVWLKFVPGMAFRTDNEPFKAAMKKFTEKIVWMMKAEKLFQTQGGPIILAQIENEYG 187          
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGAL_BRAOL (Beta-galactosidase OS=Brassica oleracea PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.852e-22
Identity = 63/164 (38.41%), Postives = 89/164 (54.27%), Query Frame = 3
Query:  252 DGEPFQIIGGDLHYFRILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSDRAYLQLVERWWG--VLLPKIAPLLYDIGGPIVMVQIENEFG----SYG-DDKEYL 722
            DG+   ++ G +HY R     W D + +AK  GL+TI+TYV WN HEP   +  FSG  DLV F+K  Q   L  +LR GPY+CAEW+ GGF             R+ +  ++  ++ +    V + K   L    GGPI++ QIENE+G    SYG + K Y+
Sbjct:   37 DGQRRILLSGSIHYPRSTSDMWPDLISKAKDGGLDTIETYVFWNAHEPSRRQYDFSGNLDLVRFIKTIQSAGLYSVLRIGPYVCAEWNYGGF-PVWLHNMPDMKFRTINPGFMNEMQNFTTKIVNMMKEESLFASQGGPIILAQIENEYGNVISSYGAEGKAYI 199          
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGAL5_ARATH (Beta-galactosidase 5 OS=Arabidopsis thaliana GN=BGAL5 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.852e-22
Identity = 58/143 (40.56%), Postives = 79/143 (55.24%), Query Frame = 3
Query:  270 IIGGDLHYFRILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSDRAYLQLVERWWG--VLLPKIAPLLYDIGGPIVMVQIENEF 692
            ++ G +HY R  P+ WED + +AK  GL+ I TYV WN HEP PG   F G  DLV F+K  Q++ L V LR GPY+CAEW+ GGF             R+ +  +   ++ +    V + K        GGPI++ QIENEF
Sbjct:   47 LLSGSIHYPRSTPEMWEDLIKKAKDGGLDVIDTYVFWNGHEPSPGTYNFEGRYDLVRFIKTIQEVGLYVHLRIGPYVCAEWNFGGFPVWLKYVDGISF-RTDNGPFKSAMQGFTEKIVQMMKEHRFFASQGGPIILSQIENEF 188          
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGAL2_ARATH (Beta-galactosidase 2 OS=Arabidopsis thaliana GN=BGAL2 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.852e-22
Identity = 59/150 (39.33%), Postives = 82/150 (54.67%), Query Frame = 3
Query:  252 DGEPFQIIGGDLHYFRILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSDRAYLQLVERWWG--VLLPKIAPLLYDIGGPIVMVQIENEFG 695
            +G+   +I G +HY R  P+ W D + +AK  GL+ IQTYV WN HEP PG   F    DLV F KL  +  L + LR GPY+CAEW+ GGF             R+ +  +   ++++    V + K   L    GGPI++ QIENE+G
Sbjct:   39 NGQRRILISGSIHYPRSTPEMWPDLIKKAKEGGLDVIQTYVFWNGHEPSPGNYYFQDRYDLVKFTKLVHQAGLYLDLRIGPYVCAEWNFGGF-PVWLKYVPGMVFRTDNEPFKIAMQKFTKKIVDMMKEEKLFETQGGPIILSQIENEYG 187          
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGA12_ORYSJ (Beta-galactosidase 12 OS=Oryza sativa subsp. japonica GN=Os09g0539200 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 3.852e-22
Identity = 57/157 (36.31%), Postives = 90/157 (57.32%), Query Frame = 3
Query:  252 DGEPFQIIGGDLHYFRILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSDRAYLQLVERWWGVLLPKI--APLLYDIGGPIVMVQIENEFGSYGDDKE 716
            DG+      G +HY R  P+ W+  +  AK  GLNTI+TYV WN HEP+PGK  F G  DL+ FL + +  D+  ++R GP+I AEW+ GG              R+++  + + +E++   ++ K+  A +    GGPI++ QIENE+G+   D++
Sbjct:   46 DGKRDLFFSGAIHYPRSPPEMWDKLVKTAKMGGLNTIETYVFWNGHEPEPGKYYFEGRFDLIRFLNVIKDNDMYAIVRIGPFIQAEWNHGGL-PYWLREIGHIIFRANNEPFKREMEKFVRFIVQKLKDAEMFAPQGGPIILSQIENEYGNIKKDRK 201          
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGAL9_ORYSJ (Beta-galactosidase 9 OS=Oryza sativa subsp. japonica GN=Os06g0573600 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.571e-22
Identity = 62/151 (41.06%), Postives = 85/151 (56.29%), Query Frame = 3
Query:  252 DGEPFQIIGGDLHYFRILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSD--RAYLQ-LVERWWGVLLPKIAPLLYDIGGPIVMVQIENEFG 695
            +G+   +I G +HY R  P+ W D + +AK  GL+ IQTYV WN HEP  G+  FS   DLV F+KL ++  L V LR GPY+CAEW+ GGF               +   +A +Q  VE+   V + K   L    GGPI++ Q+ENE+G
Sbjct:   32 NGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPVQGQYYFSDRYDLVRFVKLVKQAGLYVNLRIGPYVCAEWNYGGFPVWLKYVPGISFRTDNGPFKAAMQTFVEKI--VSMMKSEGLFEWQGGPIILAQVENEYG 180          
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGA14_ORYSJ (Beta-galactosidase 14 OS=Oryza sativa subsp. japonica GN=Os10g0340600 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.121e-21
Identity = 57/150 (38.00%), Postives = 82/150 (54.67%), Query Frame = 3
Query:  252 DGEPFQIIGGDLHYFRILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSDRAYLQLVERWWGVLLPKI--APLLYDIGGPIVMVQIENEFG 695
            DGE   +I G +HY R  P+ W D + +AK  GLN I+TYV WN HEP+  +  F G  D+V F K  Q   +  +LR GPYIC EW+ GG              R  ++ +   +E +  +++ K+  A +    GGPI++ QIENE+G
Sbjct:   41 DGERRIVISGSIHYPRSTPEMWPDLIKKAKEGGLNAIETYVFWNGHEPRRREFNFEGNYDVVRFFKEIQNAGMYAILRIGPYICGEWNYGGL-PVWLRDIPGIKFRLHNKPFENGMEAFTTLIVKKMKDANMFAGQGGPIILAQIENEYG 189          
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGAL9_ARATH (Beta-galactosidase 9 OS=Arabidopsis thaliana GN=BGAL9 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.912e-21
Identity = 61/163 (37.42%), Postives = 90/163 (55.21%), Query Frame = 3
Query:  255 GEPFQIIGGDLHYFRILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSDRAYLQLVERWWG--VLLPKIAPLLYDIGGPIVMVQIENEFG----SYGD-DKEYL 722
            G+   ++   +HY R  P+ W D + ++K  G + +QTYV WN HEP  G+  F G  DLV F+KL     L + LR GPY+CAEW+ GGF             R+ +  + + ++++    V L + A L    GGPI+M+QIENE+G    SYG   K+Y+
Sbjct:   49 GKRRMLVSAGIHYPRATPEMWSDLIAKSKEGGADVVQTYVFWNGHEPVKGQYNFEGRYDLVKFVKLIGSSGLYLHLRIGPYVCAEWNFGGF-PVWLRDIPGIEFRTDNEPFKKEMQKFVTKIVDLMREAKLFCWQGGPIIMLQIENEYGDVEKSYGQKGKDYV 210          
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGAL4_ORYSJ (Beta-galactosidase 4 OS=Oryza sativa subsp. japonica GN=Os02g0219200 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.497e-21
Identity = 61/145 (42.07%), Postives = 81/145 (55.86%), Query Frame = 3
Query:  270 IIGGDLHYFRILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSD--RAYLQ-LVERWWGVLLPKIAPLLYDIGGPIVMVQIENEFG 695
            ++ G +HY R  P+ W   + +AK  GL+ IQTYV WN HEP  G+  FS   DLV F+KL ++  L V LR GPY+CAEW+ GGF               +   +A +Q  VE+   V + K   L    GGPI+M Q+ENEFG
Sbjct:   54 LLSGSIHYPRSTPEMWPGLIQKAKDGGLDVIQTYVFWNGHEPVQGQYYFSDRYDLVRFVKLVKQAGLYVHLRIGPYVCAEWNFGGFPVWLKYVPGVSFRTDNGPFKAEMQKFVEKI--VSMMKSEGLFEWQGGPIIMSQVENEFG 196          
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGAL4_ORYSI (Beta-galactosidase 4 OS=Oryza sativa subsp. indica GN=OsI_006270 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.497e-21
Identity = 61/145 (42.07%), Postives = 81/145 (55.86%), Query Frame = 3
Query:  270 IIGGDLHYFRILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSD--RAYLQ-LVERWWGVLLPKIAPLLYDIGGPIVMVQIENEFG 695
            ++ G +HY R  P+ W   + +AK  GL+ IQTYV WN HEP  G+  FS   DLV F+KL ++  L V LR GPY+CAEW+ GGF               +   +A +Q  VE+   V + K   L    GGPI+M Q+ENEFG
Sbjct:   54 LLSGSIHYPRSTPEMWPGLIQKAKDGGLDVIQTYVFWNGHEPVQGQYYFSDRYDLVRFVKLVKQAGLYVHLRIGPYVCAEWNFGGFPVWLKYVPGVSFRTDNGPFKAEMQKFVEKI--VSMMKSEGLFEWQGGPIIMSQVENEFG 196          
The following BLAST results are available for this feature:
BLAST of DN617731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
BGAL4_ARATH1.324e-2238.00Beta-galactosidase 4 OS=Arabidopsis thaliana GN=BG... [more]
BGAL_BRAOL3.852e-2238.41Beta-galactosidase OS=Brassica oleracea PE=2 SV=1[more]
BGAL5_ARATH3.852e-2240.56Beta-galactosidase 5 OS=Arabidopsis thaliana GN=BG... [more]
BGAL2_ARATH3.852e-2239.33Beta-galactosidase 2 OS=Arabidopsis thaliana GN=BG... [more]
BGA12_ORYSJ3.852e-2236.31Beta-galactosidase 12 OS=Oryza sativa subsp. japon... [more]
BGAL9_ORYSJ6.571e-2241.06Beta-galactosidase 9 OS=Oryza sativa subsp. japoni... [more]
BGA14_ORYSJ1.121e-2138.00Beta-galactosidase 14 OS=Oryza sativa subsp. japon... [more]
BGAL9_ARATH1.912e-2137.42Beta-galactosidase 9 OS=Arabidopsis thaliana GN=BG... [more]
BGAL4_ORYSJ2.497e-2142.07Beta-galactosidase 4 OS=Oryza sativa subsp. japoni... [more]
BGAL4_ORYSI2.497e-2142.07Beta-galactosidase 4 OS=Oryza sativa subsp. indica... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01J20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001J20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617731 ID=DN617731; Name=DN617731; organism=Citrus sinensis; type=EST; length=726bp
GAGAGTCAACGACGACGATGACAGTCAAACGCGCGATGGCGACAATGCGA
AGGCGGAGCACCGCCACCACCAATACGACGTTGTTCCTCACCGTTTTGAT
ATCGCTCTTGGCCTTTCTTGGCTTCGTCCCTGTCTTCGCTCCCCTCCCTT
CTCTCGCCTTCCGCAATCCTCCTCCTCCTCCTCACCACCGTCATCGCCAC
AATAACGTGAATGGTCGAAAGTTTGAGATTGAGGATGACATGTTCCGGAA
AGATGGTGAGCCATTTCAGATTATTGGTGGTGACCTGCATTATTTCCGCA
TTCTCCCTCAGCACTGGGAAGATAGGCTTTTGCGAGCAAAGGCTTTAGGC
TTGAATACCATTCAAACTTATGTTCCTTGGAATCTGCATGAACCAAAACC
TGGCAAGCTGGTTTTTAGTGGCATTGCAGATCTTGTTTCATTTCTTAAAC
TTTGTCAGAAGCTGGATTTGCTTGTTATGCTTCGACCTGGGCCTTATATA
TGTGCAGAGTGGGATTTGGGGGGTTTCCCTGCTTGGTTACTTGCCAAAAA
GCCGGCTCTCAAGCTAAGGTCATCTGATCGTGCTTACCTTCAGTTGGTTG
AAAGATGGTGGGGAGTCCTACTTCCGAAAATAGCTCCTCTGCTTTATGAC
ATTGGAGGCCCAATTGTAATGGTTCAGATTGAAAATGAATTTGGTTCGTA
TGGAGATGACAAAGAGTATCTTCATC
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