DN617731

Overview
NameDN617731
Unique NameDN617731
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length726
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGAL6_ORYSJ (Beta-galactosidase 6 OS=Oryza sativa subsp. japonica GN=Os03g0255100 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 6.150e-20
Identity = 56/151 (37.09%), Postives = 82/151 (54.30%), Query Frame = 3
Query:  252 DGEPFQIIGGDLHYFRILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSDRAYLQLVERWWGVLLP--KIAPLLYDIGGPIVMVQIENEFGS 698
            DG    ++ G +HY R  P  W   + ++K  GL+ I+TYV W++HE   G+  F G  DLV F+K      L V LR GPY+CAEW+ GGF             R+ + A+   ++R+   ++   K A L    GGPI++ QIENE+G+
Sbjct:   43 DGVRRVLVSGSIHYPRSTPDMWPGLIQKSKDGGLDVIETYVFWDIHEAVRGQYDFEGRKDLVRFVKAVADAGLYVHLRIGPYVCAEWNYGGF-PVWLHFVPGIKFRTDNEAFKAEMQRFTEKVVDTMKGAGLYASQGGPIILSQIENEYGN 192          
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGA11_ORYSJ (Beta-galactosidase 11 OS=Oryza sativa subsp. japonica GN=Os08g0549200 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.370e-19
Identity = 52/149 (34.90%), Postives = 83/149 (55.70%), Query Frame = 3
Query:  252 DGEPFQIIGGDLHYFRILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSDRAYLQLVERWWGVLLPKI--APLLYDIGGPIVMVQIENEF 692
            DG       G +HY R  P  W D + +AK  GLN I++YV WN HEP+ G   F G  DL+ F KL Q+ ++  ++R GP++ AEW+ GG              R+++  + + ++++  +++ K+  A L    GGPI++ QIENE+
Sbjct:   43 DGHREIFFSGSIHYPRSPPDTWPDLISKAKEGGLNVIESYVFWNGHEPEQGVYNFEGRYDLIKFFKLIQEKEMYAIVRIGPFVQAEWNHGGL-PYWLREIPDIIFRTNNEPFKKYMKQFVTLIVNKLKEAKLFASQGGPIILAQIENEY 190          
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGA10_ARATH (Beta-galactosidase 10 OS=Arabidopsis thaliana GN=BGAL10 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.370e-19
Identity = 54/149 (36.24%), Postives = 80/149 (53.69%), Query Frame = 3
Query:  270 IIGGDLHYFRILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSDRAYLQLVERW--WGVLLPKIAPLLYDIGGPIVMVQIENEFGSYGDD 710
            II   +HY R +P  W   +  AK  G N I++YV WN HEP PGK  F G  ++V F+K+ Q+  + ++LR GP++ AEW+ GG              R+ +  +   +E +  + V L K   L    GGPI++ Q+ENE+G Y  D
Sbjct:   48 IISAAIHYPRSVPAMWPSLVQTAKEGGCNAIESYVFWNGHEPSPGKYYFGGRYNIVKFIKIVQQAGMHMILRIGPFVAAEWNYGG-VPVWLHYVPGTVFRADNEPWKHYMESFTTYIVNLLKQEKLFAPQGGPIILSQVENEYGYYEKD 195          
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGAL6_ARATH (Beta-galactosidase 6 OS=Arabidopsis thaliana GN=BGAL6 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.789e-19
Identity = 57/151 (37.75%), Postives = 81/151 (53.64%), Query Frame = 3
Query:  252 DGEPFQIIGGDLHYFRILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSDRAYLQLVERWWG--VLLPKIAPLLYDIGGPIVMVQIENEFGS 698
            DG+   +  G +HY R  P+ W   + + K  G++ IQTYV WNLHEPK G+  FSG  DLV F+K  +   L V LR GP+I AEW+ GG              R+ +  +   ++++    V L K   L    GGPI++ QIENE+ +
Sbjct:   42 DGQRKLLFSGSIHYPRSTPEMWPSLIKKTKEGGIDVIQTYVFWNLHEPKLGQYDFSGRNDLVKFIKEIRSQGLYVCLRIGPFIEAEWNYGGL-PFWLRDVPGMVYRTDNEPFKFHMQKFTAKIVDLMKSEGLYASQGGPIILSQIENEYAN 191          
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGA15_ORYSJ (Beta-galactosidase 15 OS=Oryza sativa subsp. japonica GN=Os12g0429200 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.518e-18
Identity = 56/151 (37.09%), Postives = 76/151 (50.33%), Query Frame = 3
Query:  255 GEPFQIIGGDLHYFRILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSD--RAYLQ-LVERWWGVLLPKIAPLLYDIGGPIVMVQIENEFGS 698
            G+   ++   LHY R  P+ W   + + K  G + I+TYV WN HEP  G+  F    DLV F KL     L + LR GPY CAEW+ GGF               ++  +A +Q  V +   V L K   L    GGPI++ QIENE+G+
Sbjct:   75 GKRRMLVSAGLHYPRATPEMWPSLIAKCKEGGADVIETYVFWNGHEPAKGQYYFEERFDLVKFAKLVAAEGLFLFLRIGPYACAEWNFGGFPVWLRDIPGIEFRTDNEPFKAEMQTFVTKI--VTLMKEEKLYSWQGGPIILQQIENEYGN 223          
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGAL_ASPNG (Beta-galactosidase OS=Aspergillus niger GN=lacA PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.731e-17
Identity = 55/150 (36.67%), Postives = 74/150 (49.33%), Query Frame = 3
Query:  252 DGEPFQIIGGDLHYFRILPQHWE-DRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSDRAYLQLVERWWGVLLPKIAPLLYDIGGPIVMVQIENEFGS 698
            +GE   I  G+ H FR+  +  + D   + KALG N +  YV W L E KPG+    GI DL  F     +  + ++ RPGPYI AE   GGF             RSSD+AYL   + +   +   IA      GGPI++ Q ENE+ S
Sbjct:   56 NGERIMIFSGEFHPFRLPVKELQLDIFQKVKALGFNCVSFYVDWALVEGKPGEYRADGIFDLEPFFDAASEAGIYLLARPGPYINAESSGGGF--PGWLQRVNGTLRSSDKAYLDATDNYVSHVAATIAKYQITNGGPIILYQPENEYTS 203          
BLAST of DN617731 vs. ExPASy Swiss-Prot
Match: BGAL3_ORYSJ (Beta-galactosidase 3 OS=Oryza sativa subsp. japonica GN=Os01g0875500 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.780e-15
Identity = 46/144 (31.94%), Postives = 74/144 (51.39%), Query Frame = 3
Query:  270 IIGGDLHYFRILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLVMLRPGPYICAEWDLGGFXXXXXXXXXXXXXRSSDRAYLQLVERW--WGVLLPKIAPLLYDIGGPIVMVQIENEFG 695
            +I   +HY R +P+ W   +  AK  G + ++TYV WN HEP  G+  F    DLV F K+ +   L ++LR GP++ AEW  GG              R+++  +   ++R+  + V + K        GG I++ Q+ENE+G
Sbjct:   54 LISTSIHYPRSVPEMWPKLVAEAKDGGADCVETYVFWNGHEPAQGQYYFEERFDLVRFAKIVKDAGLYMILRIGPFVAAEWTFGG-VPVWLHYAPGTVFRTNNEPFKSHMKRFTTYIVDMMKKEQFFASQGGHIILAQVENEYG 196          
The following BLAST results are available for this feature:
BLAST of DN617731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
BGAL6_ORYSJ6.150e-2037.09Beta-galactosidase 6 OS=Oryza sativa subsp. japoni... [more]
BGA11_ORYSJ1.370e-1934.90Beta-galactosidase 11 OS=Oryza sativa subsp. japon... [more]
BGA10_ARATH1.370e-1936.24Beta-galactosidase 10 OS=Arabidopsis thaliana GN=B... [more]
BGAL6_ARATH1.789e-1937.75Beta-galactosidase 6 OS=Arabidopsis thaliana GN=BG... [more]
BGA15_ORYSJ7.518e-1837.09Beta-galactosidase 15 OS=Oryza sativa subsp. japon... [more]
BGAL_ASPNG3.731e-1736.67Beta-galactosidase OS=Aspergillus niger GN=lacA PE... [more]
BGAL3_ORYSJ7.780e-1531.94Beta-galactosidase 3 OS=Oryza sativa subsp. japoni... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01J20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001J20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617731 ID=DN617731; Name=DN617731; organism=Citrus sinensis; type=EST; length=726bp
GAGAGTCAACGACGACGATGACAGTCAAACGCGCGATGGCGACAATGCGA
AGGCGGAGCACCGCCACCACCAATACGACGTTGTTCCTCACCGTTTTGAT
ATCGCTCTTGGCCTTTCTTGGCTTCGTCCCTGTCTTCGCTCCCCTCCCTT
CTCTCGCCTTCCGCAATCCTCCTCCTCCTCCTCACCACCGTCATCGCCAC
AATAACGTGAATGGTCGAAAGTTTGAGATTGAGGATGACATGTTCCGGAA
AGATGGTGAGCCATTTCAGATTATTGGTGGTGACCTGCATTATTTCCGCA
TTCTCCCTCAGCACTGGGAAGATAGGCTTTTGCGAGCAAAGGCTTTAGGC
TTGAATACCATTCAAACTTATGTTCCTTGGAATCTGCATGAACCAAAACC
TGGCAAGCTGGTTTTTAGTGGCATTGCAGATCTTGTTTCATTTCTTAAAC
TTTGTCAGAAGCTGGATTTGCTTGTTATGCTTCGACCTGGGCCTTATATA
TGTGCAGAGTGGGATTTGGGGGGTTTCCCTGCTTGGTTACTTGCCAAAAA
GCCGGCTCTCAAGCTAAGGTCATCTGATCGTGCTTACCTTCAGTTGGTTG
AAAGATGGTGGGGAGTCCTACTTCCGAAAATAGCTCCTCTGCTTTATGAC
ATTGGAGGCCCAATTGTAATGGTTCAGATTGAAAATGAATTTGGTTCGTA
TGGAGATGACAAAGAGTATCTTCATC
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