DN617730

Overview
NameDN617730
Unique NameDN617730
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length602
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN617730 vs. ExPASy Swiss-Prot
Match: GLBL2_HUMAN (Beta-galactosidase-1-like protein 2 OS=Homo sapiens GN=GLB1L2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.837e-11
Identity = 33/69 (47.83%), Postives = 43/69 (62.32%), Query Frame = -1 
Query:  375 PAFYVGRFSIDKVNQVKDTYLSFSGWGKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILHHGENLVVIFE 581
            PAF++G  SI       DT+L   GW KG+ F+N  NLGR+W + GPQ  LY+P P L  G N V++FE
Sbjct:  548 PAFFLGSLSISSTPC--DTFLKLEGWEKGVVFINGQNLGRYW-NIGPQKTLYLPGPWLSSGINQVIVFE 613
The following BLAST results are available for this feature:
BLAST of DN617730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
GLBL2_HUMAN4.837e-1147.83Beta-galactosidase-1-like protein 2 OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01J20_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001J20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617730 ID=DN617730; Name=DN617730; organism=Citrus sinensis; type=EST; length=602bp
TTTTCAAATAAATTTGAGTTTTTGAAATATAGATTACTAACATAAAGGTA
CATTAGACAAAGATTCATGGCATTTCTATTTACCGCACCTCCAGCCAATC
CTCTCTATCCATGTATTATACTTCAGCCAGATATCATCTTACATTGAAAA
TGAAATGTGATAGCATAAGCTAACTTCGGACAGAGAAGACATCCAGGGTC
CAACATAGCCAGAATGGAGGTAAACCGTCAAGCTCAACCTTTTATCTAGT
TTTGTCAAGTATGTCTCAAGGCATTCGGGAGTTAAAGCTGAAGCACATTT
GATTTAATTGAACCACACGTGAAGTCTGGTTGATTTACTGAATGAATTAC
AAGCTCCGAGTTTGGAGATTCCAGCTCAAATATGACCACAAGATTTTCCC
CATGATGAAGGATTGGAGCAGGGACATAAAGGTCGCATTGAGGTCCAAAA
GACGGCCAAAATCTTCCCAAGTTGAATTCGTTAACAAATGCAATCCCTTT
ACCCCACCCGCTGAACGATAAGTATGTATCTTTAACTTGGTTTACTTTGT
CAATAGAAAAGCGCCCAACATAGAATGCAGGTTCTTTTGTAATATTCCCA
GC
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