DN617726

Overview
NameDN617726
Unique NameDN617726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length549
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617726 vs. ExPASy Swiss-Prot
Match: C508B_DICDI (Probable cytochrome P450 508B1 OS=Dictyostelium discoideum GN=cyp508b1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.595e-12
Identity = 47/134 (35.07%), Postives = 73/134 (54.48%), Query Frame = -2
Query:  153 AVLKETFRLHPAVPLLLPRKASADTEVAG--FMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQ 548
            A++KE  RL+P  P  LP ++S D  +    + +P  +Q+LVN   +G +   ++NP  F P RFL  + D        +PFG G R C GL LA    YL   +++ +F+  L++  TP  +   E+FGLTL+
Sbjct:  349 AIIKEILRLNPVGPFGLPHRSSNDIVIGNGKYFIPKDSQILVNYRGLGFNEKYFENPSQFDPSRFLNKNNDA------YMPFGVGDRKCVGLQLAGDEQYLSFSNILLNFN--LKNIGTP--VSDYEEFGLTLK 472          
BLAST of DN617726 vs. ExPASy Swiss-Prot
Match: C340_ORYLA (Cytochrome P450 3A40 OS=Oryzias latipes GN=cyp3a40 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.595e-12
Identity = 40/111 (36.04%), Postives = 61/111 (54.95%), Query Frame = -2
Query:  213 VLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKL 545
            V+ E+ RL+P +   L R A A  EV G ++P    V+V TW + RD  LW  P  F PERF   + D     +  +PFGAG R C G+  A+ M+ L +  ++ ++D+ +
Sbjct:  360 VVNESLRLYP-IAARLERVAKATVEVNGLVIPKDMVVMVPTWPLHRDPELWPEPEKFKPERFSKENKDTFD-PYTYMPFGAGPRNCIGMRFALVMMKLAVVEILQTYDFSV 468          
BLAST of DN617726 vs. ExPASy Swiss-Prot
Match: CP2K1_ONCMY (Cytochrome P450 2K1 OS=Oncorhynchus mykiss GN=cyp2k1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.083e-12
Identity = 45/134 (33.58%), Postives = 66/134 (49.25%), Query Frame = -2
Query:  156 AVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKG---RNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTL 548
            AV+ ET RL   VP+ +P   S D    G+ +  G  V+    ++ +D S W++P +F P  F    LD +G   +    + F AGRR+C G  LA   L+L   SL+  F +    GVT   +D+    G TL
Sbjct:  362 AVIHETQRLANIVPMSVPHTTSRDVTFQGYFIKKGTSVIPLLTSVLQDDSEWESPNTFNPSHF----LDEQGGFVKRDAFMAFSAGRRVCLGEGLARMELFLFFTSLLQRFRFSPPPGVTEDDLDLTPLLGFTL 491          
BLAST of DN617726 vs. ExPASy Swiss-Prot
Match: CP21A_MOUSE (Steroid 21-hydroxylase OS=Mus musculus GN=Cyp21 PE=2 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 2.083e-12
Identity = 37/108 (34.26%), Postives = 57/108 (52.78%), Query Frame = -2
Query:  225 AVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSF 548
            A + E  RL P VPL LP +A+  + ++G+ +P    ++ N      D  +W+ P  F P+RFL       G+N     FG G R+C G PLA   L+++L  L+ +F
Sbjct:  339 ATIAEVLRLRPVVPLALPHRATRASSISGYDIPKDMVIIPNIQGANLDEMVWELPSKFWPDRFL-----EPGKNPRTPSFGCGARVCLGEPLARLELFVVLARLLQAF 441          
BLAST of DN617726 vs. ExPASy Swiss-Prot
Match: CP1A2_RAT (Cytochrome P450 1A2 OS=Rattus norvegicus GN=Cyp1a2 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.083e-12
Identity = 40/134 (29.85%), Postives = 68/134 (50.75%), Query Frame = -2
Query:  153 AVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDV--KGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQ 548
            A + E +R    VP  +P   + DT + GF +P    + +N W +  D   W +P+ F PERFL  D     K  + +++ FG G+R C G   A   ++L L  L++  ++ +  GV    +D+   +GLT++
Sbjct:  368 AFILEIYRYTSFVPFTIPHSTTRDTSLNGFHIPKECCIFINQWQVNHDEKQWKDPFVFRPERFLTNDNTAIDKTLSEKVMLFGLGKRRCIGEIPAKWEVFLFLAILLHQLEFTVPPGV---KVDLTPSYGLTMK 498          
BLAST of DN617726 vs. ExPASy Swiss-Prot
Match: C518B_DICDI (Probable cytochrome P450 518B1 OS=Dictyostelium discoideum GN=cyp518b1 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.083e-12
Identity = 42/116 (36.21%), Postives = 61/116 (52.59%), Query Frame = -2
Query:  204 AVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLW-DNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDG 548
            A LKE  RL PA P  +PR ++   EV G  +P G  +  + ++I RD   W +N   F PERFL    D    N+   P+G G+R+C G   +   LY+ L +++ +F  K  DG
Sbjct:  355 ATLKEVLRLIPATPFSVPRMSNEGFEVDGIKIPKGTYLFPSMYSIFRDEKYWGENANKFYPERFL---TDSHSNNY--FPYGVGKRMCLGSNFSQHELYICLTNIVLNFKIKSIDG 465          
BLAST of DN617726 vs. ExPASy Swiss-Prot
Match: C5083_DICDI (Probable cytochrome P450 508A3 OS=Dictyostelium discoideum GN=cyp508a3-1 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.083e-12
Identity = 40/130 (30.77%), Postives = 65/130 (50.00%), Query Frame = -2
Query:  153 LKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQ 542
            +KET R  P   + +PR  S D  +    +P  AQ+ +N + + R+   ++NP  F P RF+  D      N   +PF  G R C G   A+  ++L   ++I +F +   DG   + ID  E +G+TL+
Sbjct:  345 IKETLRYKPPSSVGVPRTTSQDIIIGDKFIPKDAQIFINYYGLSRNQDYFENPEQFEPSRFMNPD-----TNIAFLPFSIGTRNCVGQNFALDEMFLAFSNIILNFKFSSIDG---KQIDETELYGVTLR 466          
BLAST of DN617726 vs. ExPASy Swiss-Prot
Match: CP2F2_MOUSE (Cytochrome P450 2F2 OS=Mus musculus GN=Cyp2f2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.721e-12
Identity = 41/123 (33.33%), Postives = 65/123 (52.85%), Query Frame = -2
Query:  180 AVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDM 548
            AV+ E  R    +P+ LP + + DT   GF++P G  V+     +  D+  +  P  F PE FL  +   K ++   +PF AGRR+C G PLA   L++   S++ +F   L+  V P+ ID+
Sbjct:  351 AVIHEVQRFADVIPMNLPHRVTRDTPFRGFLIPKGTDVITLLNTVHYDSDQFKTPQEFNPEHFLDDNHSFK-KSPAFMPFSAGRRLCLGEPLARMELFIYFTSILQNF--TLQPLVDPEDIDL 470          
BLAST of DN617726 vs. ExPASy Swiss-Prot
Match: CP2DQ_RAT (Cytochrome P450 2D26 OS=Rattus norvegicus GN=Cyp2d26 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 2.721e-12
Identity = 40/118 (33.90%), Postives = 61/118 (51.69%), Query Frame = -2
Query:  204 AVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKG---RNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDG 548
            AV+ E  R    VP  +P   S D +  GF++P G  ++ N  ++ +D ++W+ P  F PE F    LD +G   ++   +PF AGRR C G PLA   L+L    L+  F + +  G
Sbjct:  361 AVIHEVQRFADIVPTNIPHMTSRDIKFQGFLIPKGTTLIPNLSSVLKDETVWEKPLRFHPEHF----LDAQGNFVKHEAFMPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSVLAG 474          
BLAST of DN617726 vs. ExPASy Swiss-Prot
Match: CP21A_BOVIN (Steroid 21-hydroxylase OS=Bos taurus GN=CYP21 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 2.721e-12
Identity = 37/108 (34.26%), Postives = 57/108 (52.78%), Query Frame = -2
Query:  225 AVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSF 548
            A + E  RL P VPL LP + +  + + G+ +P G  V+ N      D ++W+ P+ F P+RFL       G N   + FG G R+C G  LA   L+++L  L+ +F
Sbjct:  346 ATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFL-----EPGANPSALAFGCGARVCLGESLARLELFVVLLRLLQAF 448          
The following BLAST results are available for this feature:
BLAST of DN617726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 304
Match NameE-valueIdentityDescription
C508B_DICDI1.595e-1235.07Probable cytochrome P450 508B1 OS=Dictyostelium di... [more]
C340_ORYLA1.595e-1236.04Cytochrome P450 3A40 OS=Oryzias latipes GN=cyp3a40... [more]
CP2K1_ONCMY2.083e-1233.58Cytochrome P450 2K1 OS=Oncorhynchus mykiss GN=cyp2... [more]
CP21A_MOUSE2.083e-1234.26Steroid 21-hydroxylase OS=Mus musculus GN=Cyp21 PE... [more]
CP1A2_RAT2.083e-1229.85Cytochrome P450 1A2 OS=Rattus norvegicus GN=Cyp1a2... [more]
C518B_DICDI2.083e-1236.21Probable cytochrome P450 518B1 OS=Dictyostelium di... [more]
C5083_DICDI2.083e-1230.77Probable cytochrome P450 508A3 OS=Dictyostelium di... [more]
CP2F2_MOUSE2.721e-1233.33Cytochrome P450 2F2 OS=Mus musculus GN=Cyp2f2 PE=2... [more]
CP2DQ_RAT2.721e-1233.90Cytochrome P450 2D26 OS=Rattus norvegicus GN=Cyp2d... [more]
CP21A_BOVIN2.721e-1234.26Steroid 21-hydroxylase OS=Bos taurus GN=CYP21 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01J18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001J18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617726 ID=DN617726; Name=DN617726; organism=Citrus sinensis; type=EST; length=549bp
TATTTCGAATAAGAATAAACATTGTACAAGCATACCGAGTAAGGACAAAG
TCCATGCTACAACCTGGAAATTCATTTCATTATAGCACCAAAAAAAAAAA
AAAATGCTACTAATTAAATGGCAATAGGAAGAGCACGAAGGGGCCGAGCC
TTCTGCAAGGTGAGACCAAATTTCTCTTCCATATCTATGGTCTGTGGAGT
AACCCCATCTTCAAGTTTCCAATCAAAAGAATTAATAAGTGAACCTAACA
TCAAATATAACATTCTTATTGCCAACGGCAAGCCAGGACATATTCGTCGT
CCGGCGCCAAACGGTATTAGTTCAAAATTCCGACCTTTGACATCAAGATC
TAACCCCAAGAACCTCTCTGGAACAAAAGAGTATGGGTTGTCCCATAAGC
TAGCATCTCTTCCTATAGCCCATGTGTTGACTAAGACTTGTGCACCATTT
GGCACCATGAATCCGGCAACTTCTGTATCTGCTGAGGCTTTACGGGGAAG
TAAAAGAGGAACTGCCGGGTGCAACCTGAAGGTTTCTTTGAGTACTGCT
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