DN617726

Overview
NameDN617726
Unique NameDN617726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length549
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13457 contig Csv1_Contig13457:78..625. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617726 vs. ExPASy Swiss-Prot
Match: C513B_DICDI (Probable cytochrome P450 513B1 OS=Dictyostelium discoideum GN=cyp513b1 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.131e-11
Identity = 33/108 (30.56%), Postives = 57/108 (52.78%), Query Frame = -2
Query:  219 LKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDW 542
            LKE +R HPA P   P + + +T + G+ +  G  +  N +A  R  + +  P  F+PER+ G +      +  LI FG G R C G  LA   ++ ++ S++N +++
Sbjct:  354 LKENYRKHPAAPFGAPHETTQETVIEGYTIAKGTMIFQNIYATQRSDTFYSQPDEFIPERWNGDE-----NSQTLISFGTGIRDCIGKSLAYNEIFTIIASVLNRYEF 456          
BLAST of DN617726 vs. ExPASy Swiss-Prot
Match: C90C1_ARATH (Cytochrome P450 90C1 OS=Arabidopsis thaliana GN=ROT3 PE=2 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 6.702e-11
Identity = 39/127 (30.71%), Postives = 68/127 (53.54%), Query Frame = -2
Query:  171 VLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDG--VTPQTIDMEEK 545
            V+ ET R+   +  +  RKA  D E+ G+++P G  VL +  ++  D  ++DNPY F P R+  ++      +    PFG G+R+CPGL L+   + + L  L+  + W  E+   V+  T+ M+ +
Sbjct:  380 VINETLRMANIINGVW-RKALKDVEIKGYLIPKGWCVLASFISVHMDEDIYDNPYQFDPWRWDRINGSANS-SICFTPFGGGQRLCPGLELSKLEISIFLHHLVTRYSWTAEEDEIVSFPTVKMKRR 504          
BLAST of DN617726 vs. ExPASy Swiss-Prot
Match: CP3A4_HUMAN (Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1 SV=4)

HSP 1 Score: 66.6254 bits (161), Expect = 8.753e-11
Identity = 37/110 (33.64%), Postives = 58/110 (52.73%), Query Frame = -2
Query:  216 VLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWK 545
            V+ ET RL P + + L R    D E+ G  +P G  V++ ++A+ RD   W  P  F+PERF   + D     +   PFG+G R C G+  A+  + L L  ++ +F +K
Sbjct:  359 VVNETLRLFP-IAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 466          
BLAST of DN617726 vs. ExPASy Swiss-Prot
Match: C515B_DICDI (Probable cytochrome P450 515B1 OS=Dictyostelium discoideum GN=cyp515b1 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.753e-11
Identity = 41/132 (31.06%), Postives = 63/132 (47.73%), Query Frame = -2
Query:  153 AVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQ 548
            A +KET R  P VPL LP   S DTE+ G+++P G Q++ N ++      ++ +P  F P RF      ++    + + F  G R+CPG  L+   L+     L  +F  K       Q  D     G+TL+
Sbjct:  358 ACVKETLRRSPPVPLGLPHLCSEDTEIGGYLIPKGTQIISNIYSASNCDKVFTDPLEFNPLRF------IENSPPQTVTFSTGPRVCPGKNLSEDELFSFGTKLFKTF--KFSRPNKNQLYDEVAILGITLE 481          
The following BLAST results are available for this feature:
BLAST of DN617726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 304
Match NameE-valueIdentityDescription
C513B_DICDI5.131e-1130.56Probable cytochrome P450 513B1 OS=Dictyostelium di... [more]
C90C1_ARATH6.702e-1130.71Cytochrome P450 90C1 OS=Arabidopsis thaliana GN=RO... [more]
CP3A4_HUMAN8.753e-1133.64Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1... [more]
C515B_DICDI8.753e-1131.06Probable cytochrome P450 515B1 OS=Dictyostelium di... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01J18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001J18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617726 ID=DN617726; Name=DN617726; organism=Citrus sinensis; type=EST; length=549bp
TATTTCGAATAAGAATAAACATTGTACAAGCATACCGAGTAAGGACAAAG
TCCATGCTACAACCTGGAAATTCATTTCATTATAGCACCAAAAAAAAAAA
AAAATGCTACTAATTAAATGGCAATAGGAAGAGCACGAAGGGGCCGAGCC
TTCTGCAAGGTGAGACCAAATTTCTCTTCCATATCTATGGTCTGTGGAGT
AACCCCATCTTCAAGTTTCCAATCAAAAGAATTAATAAGTGAACCTAACA
TCAAATATAACATTCTTATTGCCAACGGCAAGCCAGGACATATTCGTCGT
CCGGCGCCAAACGGTATTAGTTCAAAATTCCGACCTTTGACATCAAGATC
TAACCCCAAGAACCTCTCTGGAACAAAAGAGTATGGGTTGTCCCATAAGC
TAGCATCTCTTCCTATAGCCCATGTGTTGACTAAGACTTGTGCACCATTT
GGCACCATGAATCCGGCAACTTCTGTATCTGCTGAGGCTTTACGGGGAAG
TAAAAGAGGAACTGCCGGGTGCAACCTGAAGGTTTCTTTGAGTACTGCT
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