DN617718

Overview
NameDN617718
Unique NameDN617718
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length566
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: EFTU_CYAPA (Elongation factor Tu, cyanelle OS=Cyanophora paradoxa GN=tufA PE=3 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 8.557e-20
Identity = 56/152 (36.84%), Postives = 79/152 (51.97%), Query Frame = 1
Query:   52 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 507
            K H+NI  IGHVD GK+T T  +   L    K    ++++               +D    E+ RGITI+ A  ++ET K +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  M+   NK D
Sbjct:   10 KPHVNIGTIGHVDHGKTTLTAAITTALASQGKGKARKYDE---------------IDAAPEEKARGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPNMVVFLNKED 139          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: EFTU_CHICK (Elongation factor Tu, mitochondrial (Fragment) OS=Gallus gallus GN=TUFM PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.557e-20
Identity = 56/160 (35.00%), Postives = 83/160 (51.88%), Query Frame = 1
Query:   37 AMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 516
            A  +++ H+N+  IGHVD GK+T T  +   L        +R+E                +DK   ER RGITI+ A  ++ T + +    D PGH D++KNMITGT+  D  +L++ +T G          QTREH LLA  +GV+ ++   NK DA +
Sbjct:   40 AFVRDRPHVNVGTIGHVDHGKTTLTAAITKVLSESGGARFQRYED---------------IDKAPEERARGITINAAHVEYSTARRHYAHTDCPGHADYVKNMITGTAPLDGCILVVAATDGQMP-------QTREHLLLARQVGVRHVVVYVNKADAVS 177          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: EFTU2_CARHZ (Elongation factor Tu 2 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=tuf2 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.557e-20
Identity = 59/152 (38.82%), Postives = 80/152 (52.63%), Query Frame = 1
Query:   52 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 507
            K H+NI  IGHVD GK+T T  +   L            K+     KR  +    +D    ERERGITI+ A  ++ET K +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK D
Sbjct:   10 KPHVNIGTIGHVDHGKTTLTAAITTVLA-----------KKGLAQQKRYDE----IDNAPEERERGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKAD 139          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: CYSN_SALAR (Sulfate adenylyltransferase subunit 1 OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=cysN PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.557e-20
Identity = 54/156 (34.62%), Postives = 83/156 (53.21%), Query Frame = 1
Query:   46 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 507
            + K+ +  +  G VD GKST  G L++    I +  +     ++     +  K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMD 171          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: CYSN_FRATW (Sulfate adenylyltransferase subunit 1 OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=cysN PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.557e-20
Identity = 64/180 (35.56%), Postives = 92/180 (51.11%), Query Frame = 1
Query:   46 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKE 558
            ++K  +  +  G VD GKST  G L++     D ++I  FE + A +   S K          A ++D L++ERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+++ID+  G          QTR H+ +   LG+K +I   NKMD  T  YS+  Y  I  E
Sbjct:   20 QQKELLRFITCGSVDDGKSTLMGRLLH-----DSKLI--FEDQLASIVADSKKVGTQGDRLDLALLVDGLQSEREQGITIDVAYRYFSTDKRKFIIADTPGHEQYTRNMATGASNCDLAIILIDARKG-------LQTQTRRHSFICSLLGIKHVIVAVNKMD--TVGYSQQIYKSIQDE 183          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: CYSN_FRATN (Sulfate adenylyltransferase subunit 1 OS=Francisella tularensis subsp. novicida (strain U112) GN=cysN PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.557e-20
Identity = 64/180 (35.56%), Postives = 92/180 (51.11%), Query Frame = 1
Query:   46 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKE 558
            ++K  +  +  G VD GKST  G L++     D ++I  FE + A +   S K          A ++D L++ERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+++ID+  G          QTR H+ +   LG+K +I   NKMD  T  YS+  Y  I  E
Sbjct:   20 QQKELLRFITCGSVDDGKSTLIGRLLH-----DSKLI--FEDQLASIVADSKKVGTQGDRLDLALLVDGLQSEREQGITIDVAYRYFSTDKRKFIIADTPGHEQYTRNMATGASNCDLAIILIDARKG-------LQTQTRRHSFICSLLGIKHVIVAVNKMD--TVGYSQQIYKSIQDE 183          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: CYSN_CITK8 (Sulfate adenylyltransferase subunit 1 OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=cysN PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.557e-20
Identity = 54/156 (34.62%), Postives = 83/156 (53.21%), Query Frame = 1
Query:   46 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 507
            + K+ +  +  G VD GKST  G L++    I +  +     ++     +  K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMD 171          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: CYSN_CELJU (Sulfate adenylyltransferase subunit 1 OS=Cellvibrio japonicus (strain Ueda107) GN=cysN PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.557e-20
Identity = 56/159 (35.22%), Postives = 86/159 (54.09%), Query Frame = 1
Query:   37 AMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 507
            A  ++K  +  +  G VD GKST  G L++    I +  +E    ++++      K   A ++D L+AERE+GITID+A   F T+K    + D PGH  + +NM TG S  D A+++ID+  G          QTR H+ +A  LG+K ++   NKMD
Sbjct:   17 AQHEKKELLRFLTCGSVDDGKSTLIGRLLHDSKMIYEDQLEAVRADSSKHGTTGEKIDLALLVDGLQAEREQGITIDVAYRYFSTSKRKFIIADTPGHEQYTRNMATGASTCDLAIILIDARHGVMT-------QTRRHSYIASLLGIKHIVVAINKMD 168          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: CYSN_ARCB4 (Sulfate adenylyltransferase subunit 1 OS=Arcobacter butzleri (strain RM4018) GN=cysN PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.557e-20
Identity = 54/156 (34.62%), Postives = 85/156 (54.49%), Query Frame = 1
Query:   46 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMN--KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 507
            + K  +  +  G VD GKST  G L++    I +  +   +K++ ++   +  F  A ++D L++ERE+GITID+A   F T K    + D PGH  + +NM TG S AD A+++ID+  G          QTR H+ +   LG+K ++   NKMD
Sbjct:   20 ENKQLLRFITCGSVDDGKSTLIGRLLHDSKMIFEDQLAAIKKDSKKVGTTEGEFDLALLVDGLQSEREQGITIDVAYRYFTTDKRKFIIADTPGHEQYTRNMATGASTADLAIILIDARYG-------VQTQTRRHSFITKLLGIKHIVVAVNKMD 168          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: CYSNC_MYCTU (Bifunctional enzyme cysN/cysC OS=Mycobacterium tuberculosis GN=cysNC PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.557e-20
Identity = 54/151 (35.76%), Postives = 79/151 (52.32%), Query Frame = 1
Query:   55 THINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 507
            T + +   G VD GKST  G L+Y    + +      E+ + +        A V D L+AERE+GITID+A   F T K    + D PGH  + +NM+TG S A   ++++D+  G  E       Q+R HA LA  LG++ ++   NKMD
Sbjct:    3 TLLRLATAGSVDDGKSTLIGRLLYDSKAVMEDQWASVEQTSKDRGHDYTDLALVTDGLRAEREQGITIDVAYRYFATPKRKFIIADTPGHIQYTRNMVTGASTAQLVIVLVDARHGLLE-------QSRRHAFLASLLGIRHLVLAVNKMD 146          
The following BLAST results are available for this feature:
BLAST of DN617718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_CYAPA8.557e-2036.84Elongation factor Tu, cyanelle OS=Cyanophora parad... [more]
EFTU_CHICK8.557e-2035.00Elongation factor Tu, mitochondrial (Fragment) OS=... [more]
EFTU2_CARHZ8.557e-2038.82Elongation factor Tu 2 OS=Carboxydothermus hydroge... [more]
CYSN_SALAR8.557e-2034.62Sulfate adenylyltransferase subunit 1 OS=Salmonell... [more]
CYSN_FRATW8.557e-2035.56Sulfate adenylyltransferase subunit 1 OS=Francisel... [more]
CYSN_FRATN8.557e-2035.56Sulfate adenylyltransferase subunit 1 OS=Francisel... [more]
CYSN_CITK88.557e-2034.62Sulfate adenylyltransferase subunit 1 OS=Citrobact... [more]
CYSN_CELJU8.557e-2035.22Sulfate adenylyltransferase subunit 1 OS=Cellvibri... [more]
CYSN_ARCB48.557e-2034.62Sulfate adenylyltransferase subunit 1 OS=Arcobacte... [more]
CYSNC_MYCTU8.557e-2035.76Bifunctional enzyme cysN/cysC OS=Mycobacterium tub... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01J14_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001J14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617718 ID=DN617718; Name=DN617718; organism=Citrus sinensis; type=EST; length=566bp
TCAATTTGTCTCTTCGAAGTTTCAGTTAATTTAACAGCCATGGGTAAGGA
GAAGACTCACATCAACATTGTGGTGATTGGCCATGTCGACTCTGGAAAGT
CGACCACCACCGGACACTTGATCTACAAGCTTGGTGGTATTGACAAGCGT
GTGATCGAGAGGTTCGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCATT
CAAGTACGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTA
TTACCATTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTGC
ACCGTCATTGATGCTCCCGGACATCGTGACTTTATCAAGAACATGATTAC
CGGTACCTCACAGGCTGACTGTGCCGTCCTTATCATTGACTCCACCACCG
GTGGTTTTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATGCT
TTGCTTGCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAA
GATGGACGCCACCACCCCCAAGTACTCAAAGGCTAGGTACGATGAAATTG
TGAAGGAGGTCTCTTC
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