DN617718

Overview
NameDN617718
Unique NameDN617718
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length566
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: EFTU_BDEBA (Elongation factor Tu OS=Bdellovibrio bacteriovorus GN=tuf PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.460e-19
Identity = 56/159 (35.22%), Postives = 79/159 (49.69%), Query Frame = 1
Query:   46 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPK 522
            + K H+NI  IGHVD GK+T T  +   L    K     +++               +DK   E+ RGITI     ++ET   +   +D PGH D++KNMITG +Q D A+L++ S  G          QTREH LLA  +GV  ++   NK+D    K
Sbjct:    8 RNKPHVNIGTIGHVDHGKTTLTAAITTTLAASGKAQAMAYDQ---------------IDKSPEEKARGITISTTHVEYETDNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSSADGPMP-------QTREHILLARQVGVPALVVFMNKVDMVDDK 144          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: EFTU_ANATD (Elongation factor Tu OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=tuf PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.460e-19
Identity = 58/154 (37.66%), Postives = 79/154 (51.30%), Query Frame = 1
Query:   46 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 507
            + K H+NI  IGHVD GK+T T  +                K  A   K  F     +DK   ERERGITI+ A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  + V  ++   NK+D
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTAAIT---------------KVLALKGKAQFMAYDQIDKAPEERERGITINTAHVEYETDARHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVNVPYIVVFLNKVD 139          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: EFTU_ACICJ (Elongation factor Tu OS=Acidiphilium cryptum (strain JF-5) GN=tuf PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.460e-19
Identity = 58/158 (36.71%), Postives = 79/158 (50.00%), Query Frame = 1
Query:   46 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTP 519
            + K H NI  IGHVD GK++ T  +                K  AE    +F+    +D    ER RGITI  A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NKMD   P
Sbjct:    8 RTKPHCNIGTIGHVDHGKTSLTAAIT---------------KVLAESGGATFRAYDSIDAAPEERARGITIATAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPALVVFLNKMDMADP 143          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: CYSN_SHEON (Sulfate adenylyltransferase subunit 1 OS=Shewanella oneidensis GN=cysN PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.460e-19
Identity = 54/159 (33.96%), Postives = 84/159 (52.83%), Query Frame = 1
Query:   37 AMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK--RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 507
            A  + K  +  +  G VD GKST  G L++    I +  +   + ++A+M     +   A ++D L+AERE+GITID+A   F + K    + D PGH  + +NM TG S  D AV+++D+  G          QT+ HA +A  LG++  +   NKMD
Sbjct:   15 AQQQHKGLLRFLTCGSVDDGKSTLIGRLLHDSAQIYEDQLASLKNDSAKMGTTGEAIDLALLVDGLQAEREQGITIDVAYRYFSSDKRKFIIADTPGHEQYTRNMATGASTCDLAVILVDARYG-------VQTQTKRHAFIASLLGIRHFVVAINKMD 166          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: CYSN_SALTI (Sulfate adenylyltransferase subunit 1 OS=Salmonella typhi GN=cysN PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.460e-19
Identity = 54/156 (34.62%), Postives = 83/156 (53.21%), Query Frame = 1
Query:   46 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 507
            + K+ +  +  G VD GKST  G L++    I +  +     ++     +  K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMD 171          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: CYSN_SALSV (Sulfate adenylyltransferase subunit 1 OS=Salmonella schwarzengrund (strain CVM19633) GN=cysN PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.460e-19
Identity = 54/156 (34.62%), Postives = 83/156 (53.21%), Query Frame = 1
Query:   46 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 507
            + K+ +  +  G VD GKST  G L++    I +  +     ++     +  K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMD 171          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: CYSN_SALPK (Sulfate adenylyltransferase subunit 1 OS=Salmonella paratyphi A (strain AKU_12601) GN=cysN PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.460e-19
Identity = 54/156 (34.62%), Postives = 83/156 (53.21%), Query Frame = 1
Query:   46 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 507
            + K+ +  +  G VD GKST  G L++    I +  +     ++     +  K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMD 171          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: CYSN_SALPC (Sulfate adenylyltransferase subunit 1 OS=Salmonella paratyphi C (strain RKS4594) GN=cysN PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.460e-19
Identity = 54/156 (34.62%), Postives = 83/156 (53.21%), Query Frame = 1
Query:   46 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 507
            + K+ +  +  G VD GKST  G L++    I +  +     ++     +  K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMD 171          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: CYSN_SALPB (Sulfate adenylyltransferase subunit 1 OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=cysN PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.460e-19
Identity = 54/156 (34.62%), Postives = 83/156 (53.21%), Query Frame = 1
Query:   46 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 507
            + K+ +  +  G VD GKST  G L++    I +  +     ++     +  K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMD 171          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: CYSN_SALPA (Sulfate adenylyltransferase subunit 1 OS=Salmonella paratyphi A GN=cysN PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.460e-19
Identity = 54/156 (34.62%), Postives = 83/156 (53.21%), Query Frame = 1
Query:   46 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 507
            + K+ +  +  G VD GKST  G L++    I +  +     ++     +  K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMD 171          
The following BLAST results are available for this feature:
BLAST of DN617718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_BDEBA1.460e-1935.22Elongation factor Tu OS=Bdellovibrio bacteriovorus... [more]
EFTU_ANATD1.460e-1937.66Elongation factor Tu OS=Anaerocellum thermophilum ... [more]
EFTU_ACICJ1.460e-1936.71Elongation factor Tu OS=Acidiphilium cryptum (stra... [more]
CYSN_SHEON1.460e-1933.96Sulfate adenylyltransferase subunit 1 OS=Shewanell... [more]
CYSN_SALTI1.460e-1934.62Sulfate adenylyltransferase subunit 1 OS=Salmonell... [more]
CYSN_SALSV1.460e-1934.62Sulfate adenylyltransferase subunit 1 OS=Salmonell... [more]
CYSN_SALPK1.460e-1934.62Sulfate adenylyltransferase subunit 1 OS=Salmonell... [more]
CYSN_SALPC1.460e-1934.62Sulfate adenylyltransferase subunit 1 OS=Salmonell... [more]
CYSN_SALPB1.460e-1934.62Sulfate adenylyltransferase subunit 1 OS=Salmonell... [more]
CYSN_SALPA1.460e-1934.62Sulfate adenylyltransferase subunit 1 OS=Salmonell... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01J14_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001J14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617718 ID=DN617718; Name=DN617718; organism=Citrus sinensis; type=EST; length=566bp
TCAATTTGTCTCTTCGAAGTTTCAGTTAATTTAACAGCCATGGGTAAGGA
GAAGACTCACATCAACATTGTGGTGATTGGCCATGTCGACTCTGGAAAGT
CGACCACCACCGGACACTTGATCTACAAGCTTGGTGGTATTGACAAGCGT
GTGATCGAGAGGTTCGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCATT
CAAGTACGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTA
TTACCATTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTGC
ACCGTCATTGATGCTCCCGGACATCGTGACTTTATCAAGAACATGATTAC
CGGTACCTCACAGGCTGACTGTGCCGTCCTTATCATTGACTCCACCACCG
GTGGTTTTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATGCT
TTGCTTGCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAA
GATGGACGCCACCACCCCCAAGTACTCAAAGGCTAGGTACGATGAAATTG
TGAAGGAGGTCTCTTC
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