DN617718

Overview
NameDN617718
Unique NameDN617718
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length566
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: EF1A_SCHCO (Elongation factor 1-alpha OS=Schizophyllum commune GN=TEF1 PE=3 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 7.614e-77
Identity = 143/175 (81.71%), Postives = 154/175 (88.00%), Query Frame = 1
Query:   40 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVS 564
            MGKEK H+N+VVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEAAE+ K SFKYAWVLDKLKAERERGITIDIALWKFET KY  TVIDAPGHRDFIKNMITGTSQADCA+L I   TG FEAGISKDGQTREHALLAFTLGV+Q+I   NKMD T  K+S+ R++EIVKE S
Sbjct:    1 MGKEKLHVNVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYMVTVIDAPGHRDFIKNMITGTSQADCAILTIAGGTGEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDTT--KWSEDRFNEIVKETS 173          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: EF1A_PIRIN (Elongation factor 1-alpha OS=Piriformospora indica GN=TEF1 PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 9.945e-77
Identity = 143/175 (81.71%), Postives = 154/175 (88.00%), Query Frame = 1
Query:   40 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVS 564
            MGKEK H+N+VVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEAAE+ K SFKYAWVLDKLKAERERGITIDIALWK ET KY  TVIDAPGHRDFIKNMITGTSQADCA+LII   TG FEAGISKDGQTREHALLAFTLGV+Q+I   NKMD T   +S+AR++EIVKE S
Sbjct:    1 MGKEKAHVNVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERERGITIDIALWKSETPKYMVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGTGEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDTT--NWSEARFNEIVKETS 173          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: EF1A_YEAST (Elongation factor 1-alpha OS=Saccharomyces cerevisiae GN=TEF1 PE=1 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 1.696e-76
Identity = 142/175 (81.14%), Postives = 154/175 (88.00%), Query Frame = 1
Query:   40 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVS 564
            MGKEK+HIN+VVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEAAE+ K SFKYAWVLDKLKAERERGITIDIALWKFET KY  TVIDAPGHRDFIKNMITGTSQADCA+LII    G FEAGISKDGQTREHALLAFTLGV+Q+I   NKMD+   K+ ++R+ EIVKE S
Sbjct:    1 MGKEKSHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYQVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGVGEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDSV--KWDESRFQEIVKETS 173          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: EF1A_YARLI (Elongation factor 1-alpha OS=Yarrowia lipolytica GN=TEF PE=2 SV=2)

HSP 1 Score: 284.648 bits (727), Expect = 2.215e-76
Identity = 141/175 (80.57%), Postives = 154/175 (88.00%), Query Frame = 1
Query:   40 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVS 564
            MGKEKTH+N+VVIGHVD+GKSTTTGHLIYK GGIDKR IE+FEKEA E+ K SFKYAWVLDKLKAERERGITIDIALWKF+T KYY TVIDAPGHRDFIKNMITGTSQADCA+LII    G FEAGISKDGQTREHALLAFTLGVKQ+I   NKMD+   K+S+ RY+EI KE +
Sbjct:    1 MGKEKTHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEADELGKGSFKYAWVLDKLKAERERGITIDIALWKFQTPKYYVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGVGEFEAGISKDGQTREHALLAFTLGVKQLIVAINKMDSV--KWSQDRYNEICKETA 173          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: EF1A_AJECG (Elongation factor 1-alpha OS=Ajellomyces capsulata (strain ATCC 26029 / G186AR / H82 / RMSCC 2432) GN=TEF PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 2.215e-76
Identity = 143/176 (81.25%), Postives = 158/176 (89.77%), Query Frame = 1
Query:   40 MGKE-KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVS 564
            MGKE KTHIN+VVIGHVDSGKSTTTGHLIYK GGID R IE+FEKEA E+ K+SFKYAWVLDKLK+ERERGITIDIALWKFET KY  TVIDAPGHRDFIKNMITGTSQADCA+LII + TG FEAGISKDGQTREHALLAFTLGV+Q+I   NKMD T  K+S++R++EI+KEVS
Sbjct:    1 MGKEDKTHINLVVIGHVDSGKSTTTGHLIYKCGGIDSRTIEKFEKEAEELGKKSFKYAWVLDKLKSERERGITIDIALWKFETPKYSVTVIDAPGHRDFIKNMITGTSQADCAILIIAAGTGEFEAGISKDGQTREHALLAFTLGVRQLIVAINKMDTT--KWSESRFNEIIKEVS 174          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: EF1A_CRYNE (Elongation factor 1-alpha OS=Cryptococcus neoformans GN=TEF1 PE=2 SV=2)

HSP 1 Score: 283.878 bits (725), Expect = 3.779e-76
Identity = 140/175 (80.00%), Postives = 155/175 (88.57%), Query Frame = 1
Query:   40 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVS 564
            MGK+K H+N+VVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA E+ K SFKYAWVLDKLKAERERGITIDIALWKFET +Y  TVIDAPGHRDFIKNMITGTSQADCA+LII +  G FEAGISKDGQTREHALLAFTLGV+Q+I  CNKMD  T K+S+ R++EIVKE +
Sbjct:    1 MGKDKLHVNVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQELGKSSFKYAWVLDKLKAERERGITIDIALWKFETPRYQVTVIDAPGHRDFIKNMITGTSQADCAILIIATGIGEFEAGISKDGQTREHALLAFTLGVRQLIVACNKMD--TCKWSEDRFNEIVKETN 173          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: EF1A_ASPOR (Elongation factor 1-alpha OS=Aspergillus oryzae GN=tef1 PE=3 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 8.419e-76
Identity = 145/176 (82.39%), Postives = 157/176 (89.20%), Query Frame = 1
Query:   40 MGKE-KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVS 564
            MGKE K HINIVVIGHVDSGKSTTTGHLIYK GGID+R IE+FEKEAAE+ K SFKYAWVLDKLK+ERERGITIDIALWKF+T+KY  TVIDAPGHRDFIKNMITGTSQADCA+LII S TG FEAGISKDGQTREHALLAFTLGV+Q+I   NKMD  T K+S+ RY+EIVKE S
Sbjct:    1 MGKEDKQHINIVVIGHVDSGKSTTTGHLIYKCGGIDQRTIEKFEKEAAELGKGSFKYAWVLDKLKSERERGITIDIALWKFQTSKYEVTVIDAPGHRDFIKNMITGTSQADCAILIIASGTGEFEAGISKDGQTREHALLAFTLGVRQLIVALNKMD--TCKWSQDRYNEIVKETS 174          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: EF1AC_PORPU (Elongation factor 1-alpha C OS=Porphyra purpurea GN=TEF-C PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 8.419e-76
Identity = 139/174 (79.89%), Postives = 152/174 (87.36%), Query Frame = 1
Query:   40 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEV 561
            MGKEK H++IVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEAAEM K SFKYAWVLDKLKAERERGITIDIALWKFET KY  T+IDAPGHRDFIKNMITGTSQAD A+L+I S  G FEAGIS++GQTREHALLA+TLGVKQMI  CNKMD     +SK RY+E+ KE+
Sbjct:    1 MGKEKQHVSIVVIGHVDSGKSTTTGHLIYKCGGIDKRAIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETDKYNFTIIDAPGHRDFIKNMITGTSQADLAILVIASPPGEFEAGISQNGQTREHALLAYTLGVKQMIVACNKMDDKNVNWSKERYEEVSKEM 174          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: EF1A_TETPY (Elongation factor 1-alpha OS=Tetrahymena pyriformis PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.100e-75
Identity = 139/172 (80.81%), Postives = 151/172 (87.79%), Query Frame = 1
Query:   49 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVS 564
            +K HIN+VVIGHVDSGKSTTTGHLIYK GGIDKRVIE+FEKE+AE  K SFKYAWVLDKLKAERERGITIDI+LWKFET KY+ T+IDAPGHRDFIKNMITGTSQAD A+L+I S  G FEAGISKDGQTREHALLAFTLGVKQMI C NKMD  T  +S+ RY EI KE+S
Sbjct:    5 DKVHINLVVIGHVDSGKSTTTGHLIYKCGGIDKRVIEKFEKESAEQGKGSFKYAWVLDKLKAERERGITIDISLWKFETAKYHFTIIDAPGHRDFIKNMITGTSQADVAILMIASPQGEFEAGISKDGQTREHALLAFTLGVKQMIVCLNKMDEKTVNFSEERYQEIKKELS 176          
BLAST of DN617718 vs. ExPASy Swiss-Prot
Match: EF1A_PORYE (Elongation factor 1-alpha OS=Porphyra yezoensis PE=2 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 9.308e-75
Identity = 137/174 (78.74%), Postives = 152/174 (87.36%), Query Frame = 1
Query:   40 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEV 561
            MGKEK H++IVVIGHVDSGKSTTTGHLIYK GGI+KR IE+FEKEAAEM K SFKYAWVLDKLKAERERGITIDIALWKFET KY  T+IDAPGHRDFIKNMITGTSQAD A+L+I S  G FEAGIS++GQTREHALLA+TLGVKQMI  CNKMD     +S+ RY+E+ KE+
Sbjct:    1 MGKEKQHVSIVVIGHVDSGKSTTTGHLIYKCGGIEKRAIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETEKYSFTIIDAPGHRDFIKNMITGTSQADLAILVIASPPGEFEAGISQNGQTREHALLAYTLGVKQMIVACNKMDDKNVNWSQDRYEEVSKEM 174          
The following BLAST results are available for this feature:
BLAST of DN617718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A_SCHCO7.614e-7781.71Elongation factor 1-alpha OS=Schizophyllum commune... [more]
EF1A_PIRIN9.945e-7781.71Elongation factor 1-alpha OS=Piriformospora indica... [more]
EF1A_YEAST1.696e-7681.14Elongation factor 1-alpha OS=Saccharomyces cerevis... [more]
EF1A_YARLI2.215e-7680.57Elongation factor 1-alpha OS=Yarrowia lipolytica G... [more]
EF1A_AJECG2.215e-7681.25Elongation factor 1-alpha OS=Ajellomyces capsulata... [more]
EF1A_CRYNE3.779e-7680.00Elongation factor 1-alpha OS=Cryptococcus neoforma... [more]
EF1A_ASPOR8.419e-7682.39Elongation factor 1-alpha OS=Aspergillus oryzae GN... [more]
EF1AC_PORPU8.419e-7679.89Elongation factor 1-alpha C OS=Porphyra purpurea G... [more]
EF1A_TETPY1.100e-7580.81Elongation factor 1-alpha OS=Tetrahymena pyriformi... [more]
EF1A_PORYE9.308e-7578.74Elongation factor 1-alpha OS=Porphyra yezoensis PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01J14_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001J14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617718 ID=DN617718; Name=DN617718; organism=Citrus sinensis; type=EST; length=566bp
TCAATTTGTCTCTTCGAAGTTTCAGTTAATTTAACAGCCATGGGTAAGGA
GAAGACTCACATCAACATTGTGGTGATTGGCCATGTCGACTCTGGAAAGT
CGACCACCACCGGACACTTGATCTACAAGCTTGGTGGTATTGACAAGCGT
GTGATCGAGAGGTTCGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCATT
CAAGTACGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTA
TTACCATTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTGC
ACCGTCATTGATGCTCCCGGACATCGTGACTTTATCAAGAACATGATTAC
CGGTACCTCACAGGCTGACTGTGCCGTCCTTATCATTGACTCCACCACCG
GTGGTTTTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATGCT
TTGCTTGCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAA
GATGGACGCCACCACCCCCAAGTACTCAAAGGCTAGGTACGATGAAATTG
TGAAGGAGGTCTCTTC
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