DN617707
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617707 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 221.09 bits (562), Expect = 2.970e-57 Identity = 97/143 (67.83%), Postives = 112/143 (78.32%), Query Frame = 2 Query: 140 GGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNG 562 GGGW++ HATFY YGNLYSQGYG NTAALSTALFNNG SCG+C+E+KC +DPKWC GS I +TATNFCPPN A +DNGGWCNPP HFD+A P FL+IA+YRAGIVP+SFRR+PC K+GGIRFT+NG Sbjct: 28 GGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTING 170
BLAST of DN617707 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 6.616e-57 Identity = 98/143 (68.53%), Postives = 112/143 (78.32%), Query Frame = 2 Query: 140 GGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPG--SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNG 562 GG WQ+ HATFY YGNLYSQGYGTNTAALST+LFN+G SCG+C+E+KC NDPKWC PG S+ VTATNFCPPNLA +DNGGWCNPP HFD+A P FL+IA+YRAGIVPIS+RR+ C K GGIRFT+NG Sbjct: 31 GGSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTING 173
BLAST of DN617707 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 5.601e-56 Identity = 96/143 (67.13%), Postives = 112/143 (78.32%), Query Frame = 2 Query: 140 GGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPG--SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNG 562 GG WQ+ HATFY YGNLYSQGYG NTAALSTALFNNG SCG+C+E+KC +DP+WC+PG SI+VTATNFCPPN A +D+GGWCNPP +HFD+A P FL+I YRAGIVP+S+RR+PC K GGIRFTVNG Sbjct: 33 GGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNG 175
BLAST of DN617707 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.248e-55 Identity = 99/149 (66.44%), Postives = 114/149 (76.51%), Query Frame = 2 Query: 131 GDYGGG-WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDP--KWCLPGS--IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNG 562 G YGGG WQS HATFY YGNLYSQGYG N AALSTALFN+G SCG+C+E+KC N P +WC PGS I++TATNFCPPN AL +DNGGWCNPP HFD+A P FL IA+YRAGIVP+S+RR+PC KKGG+RFT+NG Sbjct: 29 GAYGGGEWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNSGQSCGACFEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKKGGVRFTING 177
BLAST of DN617707 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 1.525e-53 Identity = 93/144 (64.58%), Postives = 111/144 (77.08%), Query Frame = 2 Query: 140 GGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCE---NDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNG 562 GGGW S HATFY YGNLYSQGYGTNTAALSTALFNNGLSCG+C+E++C+ CLPGS++VTATNFCPPN AL +D+GGWCNPP HFDM++P F +IA ++AGIVP+S+RR+ C KKGGIRFT+NG Sbjct: 61 GGGWSSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAGGGGSHSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALFKAGIVPVSYRRVACQKKGGIRFTING 204
BLAST of DN617707 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 1.525e-53 Identity = 88/142 (61.97%), Postives = 108/142 (76.06%), Query Frame = 2 Query: 137 YGGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNG 562 Y GW + ATFY YGNLYSQGYGTNTAALSTALFN G SCG+C+++KC +DPKWC+ G+I VT TNFCPPN A +N+ GGWCNPP HFD+A+P FL+IAQY+AG+VP+ +RR+ C +KGGIRFT+NG Sbjct: 25 YSSGWVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTING 166
BLAST of DN617707 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 3.398e-53 Identity = 96/143 (67.13%), Postives = 112/143 (78.32%), Query Frame = 2 Query: 143 GGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKW-CLPG--SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNG 562 G WQ GHATFY YGNLYSQGYGT+TAALSTALFN GLSCGSCYE++C D + CLPG ++ VTATNFCPPN AL +D GGWCNPP +HFD+AEPAFL+IA++ AGIVP+SFRR+ CA+KGG+RFTVNG Sbjct: 26 GQWQPGHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNRGLSCGSCYELRCAGDHRRSCLPGGATVTVTATNFCPPNYALPSDGGGWCNPPRRHFDLAEPAFLRIARHAAGIVPVSFRRVACARKGGVRFTVNG 168
BLAST of DN617707 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2) HSP 1 Score: 191.045 bits (484), Expect = 3.291e-48 Identity = 87/139 (62.59%), Postives = 102/139 (73.38%), Query Frame = 2 Query: 146 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNG 562 GW SG ATFY YGNLYS GYGT+TAALSTALFNNG SCG+C+E++C CL G++ VTATN CPPN AL+ D GGWCNPP HFDMAEPAF +IAQ RAG+VP+ +RR+ CAK+GGIRFT+ G Sbjct: 26 GWSSGSATFYGGSDASGTMGGACGYGNLYSAGYGTSTAALSTALFNNGQSCGACFEVRCGGGGS-CLAGTVAVTATNLCPPNYALAGDAGGWCNPPRPHFDMAEPAFTRIAQARAGVVPVQYRRVACAKQGGIRFTITG 163
BLAST of DN617707 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 189.889 bits (481), Expect = 7.331e-48 Identity = 84/152 (55.26%), Postives = 106/152 (69.74%), Query Frame = 2 Query: 122 GTFGDYGG-----GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNG 562 G +GG GW G ATFY YG+L+ QGYG TAALSTALFNNG CG+CYE+ CE+ P+WCLPGSI +TATNFCPP+ NDN WCNPP +HFD+++P FL+IA+Y+AG+VP+ FRR+PCAK GG++F + G Sbjct: 76 GALPSHGGQVPHSGWGHGRATFYGDINGGETQQGACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIMCEHAPQWCLPGSIKITATNFCPPDFTKPNDN--WCNPPQKHFDLSQPMFLKIAKYKAGVVPVKFRRVPCAKIGGVKFEIKG 225
BLAST of DN617707 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 189.889 bits (481), Expect = 7.331e-48 Identity = 83/141 (58.87%), Postives = 102/141 (72.34%), Query Frame = 2 Query: 149 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEND--PKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNG 562 WQ HATFY YGNLYSQGYGT AALSTALFN+G SCG CY++ C+ P+WC PG ++ +TATNFCPPN L +DNGGWCNPP HFDMA+PA+ +I Y AGI+P+ ++R+PC KKGG+RFT+NG Sbjct: 39 WQKAHATFYGGADASGTMGGACGYGNLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTING 179 The following BLAST results are available for this feature:
BLAST of DN617707 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617707 ID=DN617707; Name=DN617707; organism=Citrus sinensis; type=EST; length=563bpback to top |