DN617707
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617707 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.586e-34 Identity = 71/141 (50.35%), Postives = 87/141 (61.70%), Query Frame = 2 Query: 149 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEND--PKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNG 562 W G ATFY YGNLY QGYG N AALST LFN+G SCG CY + C+ P WC G +I VT TN+CPPN L GGWCN HFDM++PA+ I Y AGI+PI ++++ C + GG+RFT+NG Sbjct: 23 WLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGKAITVTGTNYCPPNYDLPY--GGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTING 161
BLAST of DN617707 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.705e-34 Identity = 70/148 (47.30%), Postives = 92/148 (62.16%), Query Frame = 2 Query: 131 GDYGGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCE--NDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQY-RAGIVPISFRRIPCAKKGGIRFTVNG 562 G GW HAT+Y Y N Y G+G +TAALS LF +G SCG CY+++C+ DPKWCL G ++ VTATNFCP +N+N GWCN P HFDM+ PAF +IA+ GIVP+ +RR+ C ++GG+RFT+ G Sbjct: 21 GMCSNGWIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRGAAVTVTATNFCP-----TNNNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRG 163
BLAST of DN617707 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 4.614e-34 Identity = 73/157 (46.50%), Postives = 97/157 (61.78%), Query Frame = 2 Query: 104 LNFCFRGTFGDYGGGWQSGHATFYXXXXXXXXXXXXXX--YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNG 562 L+ C R G Y W+ G AT+ YG+L YG TA +S ALF G +CG CYE++C N WCL GS ++VTAT+FC PNL LS+D GGWCN P +HF+M+E AFL++A+ +A IVP+ FRR+ C + GG+RFT+ G Sbjct: 18 LSGCIRLGNGGYEE-WRMGSATYIKESLGHPLNDGGGACGYGDLDIFRYGRYTAGVSGALFGRGSACGGCYEVRCVNHVLWCLRGSPTVVVTATDFCAPNLGLSDDYGGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAGGMRFTITG 173
BLAST of DN617707 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 6.662e-33 Identity = 64/139 (46.04%), Postives = 86/139 (61.87%), Query Frame = 2 Query: 149 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNG 562 W+ AT+Y YG+L GYG T LS LF G CG+C+E++C +D +WC+PG SII+TATNFC PN D GG CNPP +HF + AF +IA ++AG +P+ +RRI C K+G +RFTV+G Sbjct: 40 WRPARATYYAATNPRDAVGGACGYGDLVKSGYGMATVGLSETLFERGQICGACFELRCVDDLRWCIPGTSIILTATNFCAPNYGFDPDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDG 178
BLAST of DN617707 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.136e-32 Identity = 67/139 (48.20%), Postives = 88/139 (63.31%), Query Frame = 2 Query: 149 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNG 562 W+S A++Y +G+L GYG T LSTALF G +CG CYE+KC +D K+CLPG SI+VTATNFC PN L D GG CNPP HF + +F +IA ++AG++PI +RR+ C + GG+RF V G Sbjct: 33 WRSAKASYYAADPEDAIGGACG-FGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVDDLKYCLPGTSIVVTATNFCAPNFGLPADAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLRDGGVRFAVAG 170
BLAST of DN617707 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 137.117 bits (344), Expect = 5.640e-32 Identity = 62/115 (53.91%), Postives = 82/115 (71.30%), Query Frame = 2 Query: 218 YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNG 562 YG+L GYG TAALSTALFN+G SCG+CYE+ C +P+ CL GSI +TAT+ CPP A WC P +HFD++ P F++IAQ +A +VP+ +RR+PCAK GG++F V G Sbjct: 69 YGDLNKHGYGLATAALSTALFNSGASCGACYEIMCSPNPQGCLSGSIKITATDLCPPGSA-------WCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTGGVKFEVKG 176
BLAST of DN617707 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 6.235e-31 Identity = 57/117 (48.72%), Postives = 83/117 (70.94%), Query Frame = 2 Query: 218 YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNG 562 YG+L + +A LS LFN G SCG+C E++C N +WCL GS ++VTAT+FCPPN LS+D GGWCN P +H +++ AF IA+ RA ++PI +RR+ C ++GG+RF+++G Sbjct: 53 YGDLRQSSFAGYSAGLSGKLFNRGSSCGACLEVRCVNHIRWCLQGSPSVVVTATDFCPPNSGLSSDYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSG 169
BLAST of DN617707 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.941e-28 Identity = 64/141 (45.39%), Postives = 80/141 (56.74%), Query Frame = 2 Query: 149 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCE--NDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNG 562 W G ATFY YGNLY Q YG N AALST LFN+G SCG CY + C+ P WC G +I VT TN+ GGWCN +FDM++PA+ I Y AGIVPI ++++ C + GG+RF +NG Sbjct: 23 WLPGTATFYGGADGSGTMGGACGYGNLYDQRYGINNAALSTPLFNDGASCGQCYLIICDYGKAPDWCKLGKAITVTGTNY-----------GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIING 152
BLAST of DN617707 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.392e-22 Identity = 56/140 (40.00%), Postives = 81/140 (57.86%), Query Frame = 2 Query: 143 GGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNG 562 G W GHATFY G + GYG TAA+S ALF+NG CG+CYE+K ++ +++VTATN PP + N G +HFD+ PAFL IA+ + G+VP+S+R++ C ++GGI++T+ G Sbjct: 80 GPWVDGHATFYGGRDASGTTEGGAC-GYKDADGYGAMTAAVSPALFDNGAGCGACYELKGDSGK------TVVVTATNQAPPPV---NGMKG------EHFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQGGIKYTITG 203
BLAST of DN617707 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.106e-11 Identity = 46/148 (31.08%), Postives = 66/148 (44.59%), Query Frame = 2 Query: 140 GGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKGGIRFTVN 559 G GW SG AT+Y Y + Q + + AA +LF NG CGSCY++KC + + C + V T+ CP GG C HFDM+ AF +A AG++ I ++R+PC + F V+ Sbjct: 42 GYGWSSGGATWYGGPQGDGSEGGACGYQSAVGQRPFSSMIAAGGPSLFKNGKGCGSCYQIKCTGN-RACSGRPVTVVITDSCP---------GGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRFAMNVAFKVD 179 The following BLAST results are available for this feature:
BLAST of DN617707 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617707 ID=DN617707; Name=DN617707; organism=Citrus sinensis; type=EST; length=563bpback to top |