DN617707
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617707 vs. ExPASy Swiss-Prot
Match: EXPB7_ORYSJ (Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXPB7 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.202e-11 Identity = 45/149 (30.20%), Postives = 67/149 (44.97%), Query Frame = 2 Query: 122 GTFGDYGGGWQSGHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWC-LPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG 538 G+ G GGGW + AT+Y G N+ + T+ + LF +G CGSCY+++C P LP ++I+T N+ P + L HFD++ AF +A+ AGI+ I FRR+PC G Sbjct: 83 GSSGGGGGGWLNARATWYGAPNGAGPDDNGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRCVGHPACSGLPETVIITDMNYYPVS--------------LYHFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRRVPCQYPG 217
BLAST of DN617707 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.361e-11 Identity = 41/139 (29.50%), Postives = 64/139 (46.04%), Query Frame = 2 Query: 146 GWQSGHATFYXXXXXXXXXXXXXXY-GNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG 538 GW G AT+Y Y G++ + + AA S +++ +G CGSCY++KC +P C + V T+ CP GG C HFD++ AF +A+ AG +P+ + R+PC +G Sbjct: 37 GWSIGGATWYGPANGSGTDGGACGYQGDVGQPPFNSMIAAGSPSIYESGKGCGSCYQVKCSGNPS-CSGKPVTVVLTDLCP---------GGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQG 165 The following BLAST results are available for this feature:
BLAST of DN617707 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617707 ID=DN617707; Name=DN617707; organism=Citrus sinensis; type=EST; length=563bpback to top |