DN617706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 9.352e-36 Identity = 65/92 (70.65%), Postives = 80/92 (86.96%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 +RR+ CAK+GGIRFT+ GHSYF LVL+TNVGGAGDV +VS+KGS++GWQAMS NWG NWQ+ + L+GQ LSF++TASDGRTVTS+NV P W Sbjct: 146 YRRVACAKQGGIRFTITGHSYFNLVLVTNVGGAGDVTAVSVKGSRSGWQAMSHNWGANWQNGANLDGQPLSFRVTASDGRTVTSDNVAPSGW 237
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.917e-35 Identity = 64/93 (68.82%), Postives = 78/93 (83.87%), Query Frame = -1 Query: 315 SFRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 593 S+RR+PC K+GGIRFT+NGH YF LVLITNV GAGD+ S+KGS+TGW ++SRNWGQNWQSN+ L GQ+LSF++T SD RT TS N+VP NW Sbjct: 152 SYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNW 244
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 2.303e-34 Identity = 61/92 (66.30%), Postives = 79/92 (85.87%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 ++R+PCAK+GG+RFT+NG YF LVL++NVGG G + SVSIKGS+TGW AMSRNWG NWQSN+YL+GQSLSF++T+SDG+T+T +V P W Sbjct: 157 YQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVGSIQSVSIKGSRTGWMAMSRNWGVNWQSNAYLDGQSLSFKVTSSDGQTLTFLDVAPAGW 248
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.008e-34 Identity = 65/93 (69.89%), Postives = 75/93 (80.65%), Query Frame = -1 Query: 315 SFRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 593 S+RRIPC KKGGIRFT+NG YF LVL+TNV GAGDV VS+KGS T W +SRNWGQNWQSN+ L GQSLSF++ SDGR+ TSNN+ P NW Sbjct: 153 SYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNW 245
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.008e-34 Identity = 64/99 (64.65%), Postives = 82/99 (82.83%), Query Frame = -1 Query: 315 SFRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTG------WQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 593 SFRR+ CA+KGG+RFTVNGH+YF LVL+TNVGGAGDV S+++KGS +G WQ MSRNWGQNWQSN+YL+G++LSF++TA DGR++T +V P W Sbjct: 150 SFRRVACARKGGVRFTVNGHAYFNLVLVTNVGGAGDVRSLAVKGSGSGSRVGGRWQPMSRNWGQNWQSNAYLDGKALSFRVTAGDGRSLTCADVAPAGW 248
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.929e-34 Identity = 63/94 (67.02%), Postives = 79/94 (84.04%), Query Frame = -1 Query: 315 SFRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKT-GWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 593 S+RR+ C KKGGIRFT+NGHSYF LVL+TNVGGAGDVH+V++K ++ WQA+SRNWGQNWQS + L+GQ+LSF++T DGR+V SNN VP W Sbjct: 186 SYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVKSERSAAWQALSRNWGQNWQSAALLDGQALSFRVTTGDGRSVVSNNAVPRGW 279
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 5.131e-34 Identity = 63/93 (67.74%), Postives = 76/93 (81.72%), Query Frame = -1 Query: 315 SFRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 593 S+RR+ C K GGIRFT+NGH YF LVLITNV GAGD+ S+KGSKTGW +++RNWGQNWQSN+ L GQSLSF++T+SD RT TS N+ P NW Sbjct: 155 SYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNW 247
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 3.326e-33 Identity = 65/93 (69.89%), Postives = 75/93 (80.65%), Query Frame = -1 Query: 315 SFRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 593 S+RR+PC K GGIRFTVNG YF LVL+TNV GAGD++ VS+KGSKT W MSRNWGQNWQSN+ L GQSLSF++TASD R+ TS NV P W Sbjct: 157 SYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATW 249
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.264e-32 Identity = 62/93 (66.67%), Postives = 72/93 (77.42%), Query Frame = -1 Query: 315 SFRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 593 S+RR+PC KKGG+RFT+NG YF LVLITNV GAGD+ S+KG+ TGW MSRNWGQNWQSNS L GQ+LSF++T SD RT TS N P W Sbjct: 159 SYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGW 251
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 4.803e-32 Identity = 60/93 (64.52%), Postives = 74/93 (79.57%), Query Frame = -1 Query: 315 SFRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 593 SFRR+PC K+GGIRFT+NG YF LVL+TNV GAG++ + +KG+ T W MSRNWGQNWQSNS L GQSLSF++T+SD R+ TS N+ P NW Sbjct: 152 SFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANW 244 The following BLAST results are available for this feature:
BLAST of DN617706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617706 ID=DN617706; Name=DN617706; organism=Citrus sinensis; type=EST; length=593bpback to top |