DN617706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.070e-31 Identity = 60/93 (64.52%), Postives = 74/93 (79.57%), Query Frame = -1 Query: 315 SFRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 593 ++RR+PC + GGIRF VNGHSYF LVL+TNVGG+G V + IKGS TGW AMSRNWG NWQSN+ L+GQ+LSF++ A DGR VT+ +V P W Sbjct: 146 NYRRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQMWIKGSGTGWMAMSRNWGANWQSNARLDGQALSFRVQADDGRVVTAADVAPAGW 238
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.070e-31 Identity = 60/96 (62.50%), Postives = 76/96 (79.17%), Query Frame = -1 Query: 315 SFRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIK---GSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 593 S+RR+ C +KGG+RFT+NGHSYF LVL++NVGGAGDVH+V++K G K WQAM+RNWGQNWQS + L+GQ+LSF +T D R+V S NV P W Sbjct: 157 SYRRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVKAGGGRKARWQAMARNWGQNWQSGALLDGQALSFTVTTGDRRSVVSYNVAPAGW 252
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.397e-31 Identity = 56/93 (60.22%), Postives = 75/93 (80.65%), Query Frame = -1 Query: 315 SFRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 593 +F+R+ C +KGG+RFT+NG+SYF LVLITNVGG G + SV IKG+KTGW MSRNWG NWQ+N+YLN Q++SF +T++ G+T+ +V P NW Sbjct: 145 NFQRVSCTRKGGVRFTINGNSYFELVLITNVGGPGSIKSVQIKGTKTGWVTMSRNWGANWQANNYLNNQAISFSVTSTAGKTLVFEDVAPSNW 237
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.397e-31 Identity = 61/92 (66.30%), Postives = 72/92 (78.26%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 F+R+ C KKGG+RF +NG YF LV I NVGGAG + SVSIKGSKTGW AMSRNWG NWQSN+YL+GQ+LSF +T +DG T NVVP +W Sbjct: 149 FQRVSCYKKGGVRFRINGRDYFELVNIQNVGGAGSIKSVSIKGSKTGWLAMSRNWGANWQSNAYLDGQALSFSITTTDGATRVFLNVVPSSW 240
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 1.825e-31 Identity = 59/93 (63.44%), Postives = 72/93 (77.42%), Query Frame = -1 Query: 315 SFRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 593 +++R+PC + GGIRF ++GH YF LV +TNVGG+G V +SIKGS TGW AMSRNWG NWQSN+YL GQSLSF + DGR VT+ NV P NW Sbjct: 150 NYKRVPCQRSGGIRFAISGHDYFELVTVTNVGGSGVVAQMSIKGSNTGWMAMSRNWGANWQSNAYLAGQSLSFIVQLDDGRKVTAWNVAPSNW 242
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.066e-31 Identity = 60/93 (64.52%), Postives = 71/93 (76.34%), Query Frame = -1 Query: 315 SFRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 593 +F+R+PC K GGIRFT++G YF LV + NVGG+G V VSIKGSKT W AMSRNWGQNWQSN+YLN QSLSF++ D R VT N+ P NW Sbjct: 144 NFKRVPCQKSGGIRFTISGRDYFELVTVFNVGGSGVVAQVSIKGSKTDWMAMSRNWGQNWQSNAYLNTQSLSFKVKLDDAREVTVWNIAPSNW 236
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 1.446e-28 Identity = 55/95 (57.89%), Postives = 73/95 (76.84%), Query Frame = -1 Query: 315 SFRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSK--TGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 593 +FRR+PC ++GG+RFTV G YF LVL+TNV AG V S+ ++GS+ GW AMSRNWG NWQS +YL+GQ LSF++TA+DG+T+ VVP +W Sbjct: 156 AFRRVPCRRRGGVRFTVAGRDYFELVLVTNVAAAGSVRSMEVRGSRRGAGWMAMSRNWGANWQSLAYLDGQGLSFRVTATDGQTIVFAGVVPPSW 250
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 5.495e-28 Identity = 55/92 (59.78%), Postives = 70/92 (76.09%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 +RR+ C + GG+RF V G S+F VLI+NVGGAGDV SV IKG+++GW +M RNWGQ W NS GQ LSF+LT+SDG+T+T+ NVVP W Sbjct: 153 YRRVNCLRDGGVRFAVAGRSFFLTVLISNVGGAGDVRSVKIKGTESGWLSMGRNWGQIWHINSDFRGQPLSFELTSSDGKTLTNYNVVPKEW 244
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 6.076e-27 Identity = 52/92 (56.52%), Postives = 68/92 (73.91%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 + R PC + GGIRF + GH Y+ LVL+TNV G+G V + +KGS T W +MSRNWG+NWQSN+YL GQ+LSF++ A DG VT+ +V P NW Sbjct: 149 YARTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQALSFRVQADDGGVVTAYDVAPANW 240
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 6.076e-27 Identity = 52/93 (55.91%), Postives = 66/93 (70.97%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGS-KTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 ++R+PC KKGG+RFT+NGH YF LVL+TNV G + S+ I GS T W M RNWG NW S SYL GQ+LSF++T DG+T+ N+VP W Sbjct: 157 YQRVPCIKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQTLSFRVTNMDGQTLVFKNIVPSGW 249 The following BLAST results are available for this feature:
BLAST of DN617706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617706 ID=DN617706; Name=DN617706; organism=Citrus sinensis; type=EST; length=593bpback to top |