DN617706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 7.935e-27 Identity = 52/93 (55.91%), Postives = 65/93 (69.89%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGS-KTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 ++R+PC KKGG+RFT+NGH YF LVL+TNV G + S+ I GS T W M RNWG NW S SYL GQ LSF++T DG+T+ N+VP W Sbjct: 173 YQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGW 265
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.036e-26 Identity = 53/93 (56.99%), Postives = 71/93 (76.34%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTG-WQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 ++++ C + GG+RFT+NG +YF LVLI+NV G G++ V IKGSK+ W+ MSRNWG N+QSN+YLNGQSLSF++ SDG + NVVP NW Sbjct: 151 YKKVGCRRSGGMRFTINGRNYFELVLISNVAGGGEISKVWIKGSKSNKWETMSRNWGANYQSNTYLNGQSLSFKVQLSDGSIKAALNVVPSNW 243
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 1.354e-26 Identity = 52/92 (56.52%), Postives = 67/92 (72.83%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 +RRIPC+K GG++F G+ YF +VLI NVGGAGD+ V +KG+KTGW M +NWGQNW + + L GQ LSF++T SDG T NV+P NW Sbjct: 170 YRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWGQNWTTITVLTGQGLSFRVTTSDGITKDFWNVMPKNW 261
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 1.354e-26 Identity = 51/93 (54.84%), Postives = 69/93 (74.19%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKT-GWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 ++R+PC KKGG+RFT+NGH YF LVL+TNVG AG + ++ +KGSK+ W AM+ NWG W S +YL GQ LSF++T +DG+T+ NVV W Sbjct: 157 YQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAGSIKAMDVKGSKSPDWMAMAHNWGAQWHSLAYLTGQGLSFRVTITDGQTLVFPNVVRPGW 249
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 1.354e-26 Identity = 55/92 (59.78%), Postives = 68/92 (73.91%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 +RRI C K+G +RFTV+G F VLITNV G+GD+ +V IKGS+TGW M RNWGQNW N+ L Q+LSF++T+SD TVTS NV P NW Sbjct: 161 YRRINCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHINADLRNQALSFEVTSSDRSTVTSYNVSPKNW 252
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 2.309e-26 Identity = 51/92 (55.43%), Postives = 74/92 (80.43%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 ++++ C ++GG+RFTV+G +YF LVLITNV G+G V ++S+KGSKTGW ++RNWG NWQ NS L GQ+LSF++T++ G+T+ N+VVP W Sbjct: 150 YQQVKCWRQGGVRFTVSGFNYFELVLITNVAGSGSVQAMSVKGSKTGWIPLARNWGANWQCNSALVGQALSFRVTSTGGQTLQINSVVPEWW 241
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 5.143e-26 Identity = 50/93 (53.76%), Postives = 66/93 (70.97%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTG-WQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 ++R+PC KKGG+RFT+NGH YF LVL+TNV AG + S+ + GS T W M+RNWG W S +YL GQ LSF++T +D +T+ NVVP W Sbjct: 162 YQRVPCVKKGGLRFTINGHDYFQLVLVTNVAAAGSIKSMEVMGSNTADWMPMARNWGAQWHSLAYLTGQGLSFRVTNTDDQTLVFTNVVPPGW 254
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 5.143e-26 Identity = 51/93 (54.84%), Postives = 65/93 (69.89%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGS-KTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 ++R+PC KKGG+RFT+NGH YF LVL+TNV G + S+ + GS T W M RNWG NW S SYL GQ LSF++T DG+T+ N+VP W Sbjct: 175 YQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGLIKSMDVMGSNSTDWLPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGW 267
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 8.773e-26 Identity = 50/92 (54.35%), Postives = 67/92 (72.83%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 +RRIPC+K GG++F G+ YF +VLI NVGGAGD+ V +K +KTGW M +NWGQNW +++ L GQ LSF++T +DG T NV+P NW Sbjct: 176 YRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKENKTGWITMKKNWGQNWTTSTVLTGQGLSFRVTTTDGITKDFWNVMPKNW 267
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 2.553e-25 Identity = 48/92 (52.17%), Postives = 64/92 (69.57%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 +RRI CA+ GG++F G+ YF ++L NVGGAGD+ + +KG KTGW M +NWGQNW + L GQ +SF++T SDG T NNV+P NW Sbjct: 173 YRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNW 264 The following BLAST results are available for this feature:
BLAST of DN617706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617706 ID=DN617706; Name=DN617706; organism=Citrus sinensis; type=EST; length=593bpback to top |