DN617706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 2.553e-25 Identity = 48/92 (52.17%), Postives = 64/92 (69.57%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 +RRI CA+ GG++F G+ YF ++L NVGGAGD+ + +KG KTGW M +NWGQNW + L GQ +SF++T SDG T NNV+P NW Sbjct: 166 YRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNW 257
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.655e-24 Identity = 48/94 (51.06%), Postives = 69/94 (73.40%), Query Frame = -1 Query: 315 SFRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 593 S+RR+PC K GGIR+T+ G+ YF LV+++NVGGAGDV +S+KG+K W + RNWGQ WQ++ L G+SL+F++ D R TS +V+P +W Sbjct: 163 SYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEWQTSEVLTGESLTFRVMTGDHRKATSWHVLPPDW 256
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 2.822e-24 Identity = 46/92 (50.00%), Postives = 69/92 (75.00%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 ++++ C + GG+RFT+ G +YF LVL+TN+ G+G + S+S+KGS TGW MSRNWG NWQ + L GQ+LSF +T++ G+T+ ++VVP W Sbjct: 144 YQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVKGSSTGWIQMSRNWGANWQCLAGLAGQALSFTVTSTGGQTIVFDSVVPAGW 235
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 3.686e-24 Identity = 48/92 (52.17%), Postives = 69/92 (75.00%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 ++++ C ++GGIRFT+ G ++F LVL++NV G+G V SVS+KG TGW ++RNWG NWQ NS L GQ+LSF +T++ G+T+ NVVP W Sbjct: 150 YQQVKCWRQGGIRFTMGGFNFFELVLVSNVAGSGSVRSVSVKGGSTGWITLNRNWGANWQCNSGLVGQALSFAVTSTGGQTLYIYNVVPSWW 241
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 6.287e-24 Identity = 45/92 (48.91%), Postives = 69/92 (75.00%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 ++++ C + GG+RFT+NG +YF LVL+TN+ G+G + S+S+KGS TGW M+RNWG NWQ + L GQ+LSF +T++ G+T+ ++ VP W Sbjct: 144 YQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIASMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGW 235
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 6.287e-24 Identity = 49/92 (53.26%), Postives = 65/92 (70.65%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 FRR+ C + GG+RFT+ G + F VLITNV G+V +V +KGS+TGW M RNWGQNWQ ++ L GQ LSF++T GRTV + +V P +W Sbjct: 156 FRRVSCDRAGGMRFTITGGASFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRGQPLSFEVTGGRGRTVVAYSVAPPDW 247
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.401e-23 Identity = 47/94 (50.00%), Postives = 71/94 (75.53%), Query Frame = -1 Query: 315 SFRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTA-SDGRTVTSNNVVPGNW 593 ++RR+PC + GG+RF G+SY+ L+ + NVGGAGD+ S+++KGS+T W +MS NWG ++Q+ S L GQSLSF++T+ + G T+ + NV P NW Sbjct: 156 AYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQAFSSLYGQSLSFRVTSYTTGETIYAWNVAPANW 249
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 109.383 bits (272), Expect = 1.401e-23 Identity = 49/92 (53.26%), Postives = 64/92 (69.57%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 +RR+PCAK GG++F V G+ +L NVGGAGD+ +VS KGSKT W MSR WGQNW +N L GQS+S ++T SDG T +V+P +W Sbjct: 159 YRRVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVSAKGSKTAWVVMSRYWGQNWTTNVNLTGQSVSLRVTTSDGITKDFTDVMPASW 250
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.829e-23 Identity = 48/93 (51.61%), Postives = 67/93 (72.04%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 +RR+ C ++GG+RFT+ G F +V+I+NVGG G V SV+++GSK W M+RNWG NWQS+ L GQ LSF++T +D +T T NVVP +W Sbjct: 146 YRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQSSGDLRGQRLSFKVTLTDSKTQTFLNVVPSSW 238
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 2.389e-23 Identity = 46/92 (50.00%), Postives = 68/92 (73.91%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 ++R+PC K+GG+RFT+ G +YF LVLI+NV G+G + SV +KG T +SRNWG NWQS++ L GQ+L+F +T++ G+T+ N+VP W Sbjct: 155 YQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSVWVKGPNTDRMPLSRNWGANWQSHAGLVGQTLTFGVTSTGGQTLVFQNIVPAWW 246 The following BLAST results are available for this feature:
BLAST of DN617706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617706 ID=DN617706; Name=DN617706; organism=Citrus sinensis; type=EST; length=593bpback to top |