DN617706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.075e-23 Identity = 44/92 (47.83%), Postives = 68/92 (73.91%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 ++++ C + GG+RF +NG +YF LVL+TN+ G+G + S+S+KGS TGW M+RNWG NWQ + L GQ+LSF +T++ G+T+ ++ VP W Sbjct: 135 YQQVKCWRYGGVRFIINGFNYFELVLVTNMAGSGSIVSMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGW 226
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.186e-22 Identity = 46/92 (50.00%), Postives = 64/92 (69.57%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 +RR+ C ++GG+RFTV G +F LVL+ NV G+G V +VS++G+ TGW MSRNWG NWQS + L GQ LSF +T + G+ + +V P W Sbjct: 150 YRRVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVSVRGAGTGWLQMSRNWGANWQSLAGLAGQPLSFGVTTTGGQYILFQDVAPAGW 241
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 2.642e-22 Identity = 49/92 (53.26%), Postives = 65/92 (70.65%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 ++R+ C ++GG+RFTV G +YF LVLITNV G+G V S IKG+ TGW MSRNWG NWQS + L GQ+LSF +T + G+ + +V P W Sbjct: 151 YQRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRNWGANWQSLAGLAGQALSFAVTTTGGQYLQFQDVAPAWW 242
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 5.885e-22 Identity = 46/92 (50.00%), Postives = 65/92 (70.65%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 +RR+ C ++GG+RF+++G S+F VLI+NVG G+V V +KG T W M+RNWGQNW S+ L GQSLSF++T G+T+ S +V P W Sbjct: 152 YRRVKCGRRGGLRFSLSGSSHFFQVLISNVGLDGEVVGVKVKGHTTAWIPMARNWGQNWHSSLDLIGQSLSFEVTLKGGKTIASYDVAPPYW 243
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 7.686e-22 Identity = 46/92 (50.00%), Postives = 63/92 (68.48%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 590 FRR+PCAK GG++F + G+ +F ++L NVGGAG V ++ IKG++T W AM +NWGQ W + L GQ LSF+LT SDG +V P +W Sbjct: 208 FRRVPCAKIGGVKFEIKGNPHFLMILPYNVGGAGAVRAMQIKGTRTQWIAMKKNWGQIWSTGVVLTGQCLSFRLTTSDGVMKEFIDVTPPDW 299
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.814e-21 Identity = 47/94 (50.00%), Postives = 66/94 (70.21%), Query Frame = -1 Query: 315 SFRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGR-TVTSNNVVPGNW 593 S+RR+ C K GGIRF G+ Y+ LV + NVGG GD+ ++++KGS+TGW MS NWG ++Q+ S L GQSLSF+LT+ R T+ + N P +W Sbjct: 151 SYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGWINMSHNWGASYQAFSSLYGQSLSFRLTSYTTRQTIYAYNAAPASW 244
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.953e-19 Identity = 38/94 (40.43%), Postives = 65/94 (69.15%), Query Frame = -1 Query: 315 SFRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 593 S+R++ C ++GGI++T+ G+ + +V++ NVGGAGDV +++KG+K W + R+WGQ W++ + L G+SL+F++ D R TS V P +W Sbjct: 185 SYRKVACVRQGGIKYTITGNPSYNMVMVKNVGGAGDVVKLTVKGTKRVKWTPLQRSWGQLWKTEANLTGESLTFRVMTGDHRKATSWRVAPRDW 278
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.155e-18 Identity = 41/94 (43.62%), Postives = 64/94 (68.09%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIK-GSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTA-SDGRTVTSNNVVPGNW 590 +RR+PCA+ GG+RF + G+ Y+ L + NV GAGDV + +K G GW MS NWG ++Q+ + L GQ+LSF++T+ + G+T+ + V P +W Sbjct: 160 YRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHNWGASYQAFAQLGGQALSFKVTSYTTGQTILAAGVTPASW 253
BLAST of DN617706 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.098e-11 Identity = 36/97 (37.11%), Postives = 59/97 (60.82%), Query Frame = -1 Query: 315 FRRIPCAKKGGIRFTVNGHSYFTLVLITNVGGAGDVHSVSIKGSKTG--WQAMSRNWGQNWQSNSYL-NGQSLSFQLT--ASDGRTVTSNNVVPGNW 590 +RR+PC + GG+RF + G+ Y+ L+ + NVGGAGDV S+S+K S G W + NWG +Q + L N L+ +LT ++ +T+ ++ + W Sbjct: 175 YRRVPCQRTGGVRFCLQGNHYWLLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWGITYQVFAALDNSDGLTVKLTTYSTPQQTIIVSDAISPWW 271 The following BLAST results are available for this feature:
BLAST of DN617706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617706 ID=DN617706; Name=DN617706; organism=Citrus sinensis; type=EST; length=593bpback to top |