DN617702

Overview
NameDN617702
Unique NameDN617702
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length566
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10142 contig Csv1_Contig10142:345..910. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL16_ARATH (Germin-like protein subfamily 1 member 6 OS=Arabidopsis thaliana GN=At3g04200 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 8.517e-36
Identity = 74/127 (58.27%), Postives = 92/127 (72.44%), Query Frame = -1
Query:  186 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 566
            G+S  R+D+A  GQ PPHIHPRA+EI +V +G L VGFV+S+Q NN L  KVL +GDVFVFP GLIHFQ N+ +T A A++   SQ PG + IAD VFG+NPSI  + L KAFQLD K+V+ L   F
Sbjct:   96 GVSLARLDFAQGGQNPPHIHPRATEILVVTKGKLLVGFVSSNQDNNRLFYKVLKRGDVFVFPIGLIHFQMNVRRTRAVAFAGFGSQNPGTIRIADAVFGSNPSIPQEVLAKAFQLDVKLVRFLHIVF 222          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL84_ORYSJ (Germin-like protein 8-4 OS=Oryza sativa subsp. japonica GN=GER1 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 7.210e-35
Identity = 75/132 (56.82%), Postives = 95/132 (71.97%), Query Frame = -1
Query:  174 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 566
            GIS  RIDYAP G  PPHIHPRA+E+  VLEGTLYVGFVTS+   N L +KV++KGD FVFP+ +IHFQ N+     A A S+LNSQ PG +TIA  VFG+ P I+ D L KAFQ++ K++  L+++F   N
Sbjct:   94 GISLARIDYAPLGVNPPHIHPRATELLTVLEGTLYVGFVTSNP--NRLFSKVVHKGDTFVFPKAMIHFQMNLDHNKPAVAQSSLNSQNPGVITIASAVFGSKPPISDDVLTKAFQVEKKVIDWLKSQFWESN 223          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL83_ORYSJ (Germin-like protein 8-3 OS=Oryza sativa subsp. japonica GN=GER2 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 7.210e-35
Identity = 74/132 (56.06%), Postives = 96/132 (72.73%), Query Frame = -1
Query:  174 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 566
            GIS  RIDYAP G  PPH+HPRA+E+  VLEGTLYVGFVTS+   N L +KV++KGDVFVFP+ +IHFQ N+     A A SAL+SQ PG +TIA  +FG+ P I+ D L KAFQ++ K++  L+++F   N
Sbjct:   94 GISLARIDYAPMGVNPPHVHPRATELLTVLEGTLYVGFVTSNP--NRLFSKVVHKGDVFVFPKAMIHFQMNLDHNKPAVAQSALSSQNPGVITIASAIFGSTPPISDDVLVKAFQVEKKVIDWLKSQFSENN 223          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL812_ORYSJ (Germin-like protein 8-12 OS=Oryza sativa subsp. japonica GN=Os08g0231400 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 7.210e-35
Identity = 77/132 (58.33%), Postives = 95/132 (71.97%), Query Frame = -1
Query:  174 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 566
            GIS  RIDYAP G  PPHIHPRA+E+  VLEGTLYVGFVTS+   N L +KV+ KGDVFVFP+ +IHFQ N+     A A SAL+SQ PG +TIA  VFG+ P I+ D L KAFQ++ K++  LQ++F   N
Sbjct:   94 GISLARIDYAPMGVNPPHIHPRATELLTVLEGTLYVGFVTSNP--NKLFSKVVCKGDVFVFPKAMIHFQMNLDHDKPAVAQSALSSQNPGVITIASAVFGSQPPISDDVLTKAFQVEKKLIDWLQSQFWENN 223          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL14_ARATH (Germin-like protein subfamily 1 member 4 OS=Arabidopsis thaliana GN=At3g04180 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.673e-34
Identity = 73/127 (57.48%), Postives = 87/127 (68.50%), Query Frame = -1
Query:  186 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 566
            G+   R D+AP G  PPH HPR S+IFLV++G L+VGFV+S++ N TL  KVL  GDVFVFP+GLIHF  NIG+TNA   SA  SQ PG + I D VFG+ P I+P  L KAF LD   VK LQ  F
Sbjct:   95 GVDIARYDFAPGGLDPPHTHPRGSQIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVFVFPKGLIHFHANIGETNAVVISAGGSQDPGRIIIGDAVFGSKPLIDPKVLAKAFALDYNKVKYLQAVF 221          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL12_ARATH (Putative germin-like protein subfamily 1 member 2 OS=Arabidopsis thaliana GN=At3g04150 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 6.104e-34
Identity = 71/127 (55.91%), Postives = 88/127 (69.29%), Query Frame = -1
Query:  186 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 566
            GI+  R+D+AP GQ PPHIHPRAS+I LVL+G L VGFV+S+  N TL +K+L  GDVF FP GL+ F  N GKT+A A   + SQ PG + I D VFG+NP I+P  L KAF LD  IV+ +Q  F
Sbjct:   95 GIAIARLDFAPGGQLPPHIHPRASQIILVLKGQLSVGFVSSNDYNYTLFSKILYPGDVFAFPIGLVQFHANTGKTHAVAIGVVGSQDPGVIPIGDAVFGSNPLIDPKLLAKAFALDVNIVRHVQRVF 221          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL13_ARATH (Germin-like protein subfamily 1 member 3 OS=Arabidopsis thaliana GN=At3g04170 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.360e-33
Identity = 71/127 (55.91%), Postives = 88/127 (69.29%), Query Frame = -1
Query:  186 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 566
            G+   RID+AP G  PPHIHPRASEI LV++G L VGFV+S+  N TL +K+L  GDVFV P GL+ F  NIGKTNA A  A+ SQ PG +++ D VFG+ P I+P  L KAF LD  IV+ L+  F
Sbjct:   92 GVGIARIDFAPGGLIPPHIHPRASEIILVIKGKLLVGFVSSNDYNYTLFSKILYPGDVFVHPIGLVQFHANIGKTNAVAIGAVGSQNPGYISVGDAVFGSKPPIDPKILAKAFALDINIVRYLRKVF 218          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL32_ORYSJ (Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica GN=Os03g0651800 PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.776e-33
Identity = 70/127 (55.12%), Postives = 92/127 (72.44%), Query Frame = -1
Query:  186 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 566
            G+S  RIDYAP+G  PPH HPRA+EI  V EGTL VGFVT+    N L  + ++KG+VFVFP+GL+HFQ N G T+A A +A NSQ PG  +IADT+FGA P +  D L +AFQ+D  +V+ +++KF
Sbjct:   95 GVSMARIDYAPWGLSPPHTHPRATEIMFVAEGTLDVGFVTTA---NKLFTRTVSKGEVFVFPRGLVHFQRNSGNTSALAIAAFNSQLPGTQSIADTLFGAAPPLPSDTLARAFQVDGGMVESIKSKF 218          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL41_ORYSJ (Germin-like protein 4-1 OS=Oryza sativa subsp. japonica GN=Os04g0617900 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 2.319e-33
Identity = 76/129 (58.91%), Postives = 88/129 (68.22%), Query Frame = -1
Query:  186 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLN--NTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 566
            GIS  RID+AP GQ PPH HPRA+EI  VL+GTL VGFVTS+Q    N    K+L  GDVFVFPQGLIHFQ N G   A A +AL+SQ PG +TIA+ VFG+ P I  D L KAF +D   V  +Q KF
Sbjct:   98 GISFARIDFAPNGQNPPHTHPRATEILTVLQGTLLVGFVTSNQPGGGNLQFTKLLGPGDVFVFPQGLIHFQLNNGAVPAVAIAALSSQNPGVITIANAVFGSTPPILDDVLAKAFMIDKDQVDWIQAKF 226          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL15_ARATH (Germin-like protein subfamily 1 member 5 OS=Arabidopsis thaliana GN=At3g04190 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.319e-33
Identity = 72/127 (56.69%), Postives = 86/127 (67.72%), Query Frame = -1
Query:  186 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 566
            G+   RID+AP G  PPH HPR SEIFLV++G L+VGFV+S++ N TL  KVL  GDVFVFP+GLI F  NIGKTNA   +A  SQ PG + I + VFG+ P I+P  L KAF LD   VK  Q  F
Sbjct:   95 GVDIARIDFAPGGLYPPHTHPRGSEIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVFVFPKGLIQFHANIGKTNAVVIAATGSQNPGRIIIGNAVFGSKPLIDPKVLAKAFALDFNKVKYFQAVF 221          
The following BLAST results are available for this feature:
BLAST of DN617702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL16_ARATH8.517e-3658.27Germin-like protein subfamily 1 member 6 OS=Arabid... [more]
GL84_ORYSJ7.210e-3556.82Germin-like protein 8-4 OS=Oryza sativa subsp. jap... [more]
GL83_ORYSJ7.210e-3556.06Germin-like protein 8-3 OS=Oryza sativa subsp. jap... [more]
GL812_ORYSJ7.210e-3558.33Germin-like protein 8-12 OS=Oryza sativa subsp. ja... [more]
GL14_ARATH4.673e-3457.48Germin-like protein subfamily 1 member 4 OS=Arabid... [more]
GL12_ARATH6.104e-3455.91Putative germin-like protein subfamily 1 member 2 ... [more]
GL13_ARATH1.360e-3355.91Germin-like protein subfamily 1 member 3 OS=Arabid... [more]
GL32_ORYSJ1.776e-3355.12Putative germin-like protein 3-2 OS=Oryza sativa s... [more]
GL41_ORYSJ2.319e-3358.91Germin-like protein 4-1 OS=Oryza sativa subsp. jap... [more]
GL15_ARATH2.319e-3356.69Germin-like protein subfamily 1 member 5 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01J06_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001J06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617702 ID=DN617702; Name=DN617702; organism=Citrus sinensis; type=EST; length=566bp
CTAAATAAAAACAATAACAATTATGTTTATTACATGGCCACAGTCAGCCT
GGAGAGAGGTTCATGAGAGACCTCTTTTATTACATTAATTAAGATATGAT
AATCTGGAGATAAAGTAATACAGCCACTAGTGAAGAGGCCATTTATATTA
AAGCTCATTAATTCCTTCTCCTAATTGCCATTAATGAACTTATTTTGAAG
ATCTTTCACTATCTTTGGGTCCAACTGGAATGCCTTGCCAAGAAAATCGG
GATTGATTGAAGGATTGGCTCCAAAGACTGTGTCGGCTATGGTAACTTCA
CCCGGGAATTGGCTGTTTAGAGCAGAATAGGCAGCTGCATTTGTTTTTCC
AATGTTGAATTGGAAGTGAATCAAACCTTGTGGAAACACAAAAACATCTC
CCTTATTTAGAACTTTTGCGATGAGTGTGTTATTCAGTTGGTCTGATGTC
ACAAAACCGACATAAAGAGTTCCTTCCAGGACTAAGAAGATTTCGCTGGC
ACGGGGGTGAATGTGAGGTGGCCTTTGGCCATATGGTGCATAGTCAATAC
GGAATGCTGATATGCC
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