DN617702

Overview
NameDN617702
Unique NameDN617702
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length566
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10142 contig Csv1_Contig10142:345..910. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL23_ARATH (Germin-like protein subfamily 2 member 3 OS=Arabidopsis thaliana GN=GLP8 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.317e-28
Identity = 63/127 (49.61%), Postives = 83/127 (65.35%), Query Frame = -1
Query:  186 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 566
            G+S  RIDYAP G  PPH+HPRASE   VLEG L+VGF+T+      LI+K +NKGDVFVFP+ L+HFQ N  K  A+  +A +SQ PG   +  ++FG+NP I  D L KAF      ++ ++ KF
Sbjct:   92 GVSISRIDYAPGGLNPPHLHPRASEAIFVLEGRLFVGFLTT---TGKLISKHVNKGDVFVFPKALLHFQQNPNKAPASVLAAFDSQLPGTQVVGPSLFGSNPPIPDDLLAKAFGAAAPEIQKIKGKF 215          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL36_ORYSJ (Germin-like protein 3-6 OS=Oryza sativa subsp. japonica GN=Os03g0694000 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.247e-28
Identity = 60/130 (46.15%), Postives = 85/130 (65.38%), Query Frame = -1
Query:  177 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 566
            G+S  R+D+AP G  PPH+HPRA+E+ +VL G L VG + +    N   +KV+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +  T+FG+NP I    L KA ++D  +V+ L++KF  G
Sbjct:   99 GVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVELLKSKFTGG 228          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL35_ORYSJ (Germin-like protein 3-5 OS=Oryza sativa subsp. japonica GN=Os03g0693900 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.247e-28
Identity = 60/130 (46.15%), Postives = 85/130 (65.38%), Query Frame = -1
Query:  177 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 566
            G+S  R+D+AP G  PPH+HPRA+E+ +VL G L VG + +    N   +KV+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +  T+FG+NP I    L KA ++D  +V+ L++KF  G
Sbjct:   97 GVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVELLKSKFTGG 226          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL33_ORYSJ (Germin-like protein 3-3 OS=Oryza sativa subsp. japonica GN=Os03g0693700 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.247e-28
Identity = 61/130 (46.92%), Postives = 85/130 (65.38%), Query Frame = -1
Query:  177 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 566
            G+S  RID+AP G  PPH+HPRA+E+ +VL G L VG + S    N   ++V+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +  T+FG+NP I    L KA ++D  +V+ L++KF  G
Sbjct:   97 GVSMNRIDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGSLDTGNRYYSRVVRGGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVELLKSKFTGG 226          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL22_ARATH (Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana GN=At1g02335 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.247e-28
Identity = 62/125 (49.60%), Postives = 83/125 (66.40%), Query Frame = -1
Query:  189 ISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNK 563
            +S  RIDYAP G  PPH HPRA+E+  VLEG L VGF+T+    N L  K +  G+VFVFP+GL+HFQ N GK+ A+  SA NSQ PG  ++A T+F A P++  D L K FQ+  K+V  ++ +
Sbjct:   93 VSLARIDYAPGGLNPPHTHPRATEVVYVLEGELEVGFITTA---NKLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATLFAAEPALPEDVLTKTFQVGSKMVDKIKER 214          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL11_ORYSJ (Germin-like protein 1-1 OS=Oryza sativa subsp. japonica GN=GER4 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.247e-28
Identity = 66/127 (51.97%), Postives = 81/127 (63.78%), Query Frame = -1
Query:  186 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 566
            G+S  RIDYAP GQ PPH HPRA+EI  VLEG L VGF+T+    N L  K +  G+VFVFP+GL+HFQ N G   AA  +A NSQ  G   IA T+F A P +  D L KAF++D   V  ++ KF
Sbjct:   92 GVSMARIDYAPGGQNPPHTHPRATEIIFVLEGVLEVGFITTA---NKLFTKTVTAGEVFVFPRGLVHFQQNRGHGPAAVIAAFNSQLQGTQAIAATLFAAAPPVPSDVLAKAFRVDVPQVDAIKAKF 215          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GER2_WHEAT (Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.247e-28
Identity = 60/130 (46.15%), Postives = 89/130 (68.46%), Query Frame = -1
Query:  177 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 566
            G+S  R+D+AP G  PPHIHPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+HFQFN+GKT A+   + NSQ PG V +  T+FG+NP I    L KA +++ ++V+ L++KF  G
Sbjct:   94 GVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLTKALRVEARVVELLKSKFAAG 223          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: OXO2_HORVU (Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.537e-28
Identity = 59/130 (45.38%), Postives = 88/130 (67.69%), Query Frame = -1
Query:  177 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 566
            G+S  R+D+AP G  PPH+HPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+HFQFN+GKT A+   + NSQ PG V +  T+FG+NP I    L KA +++  +V+ L++KF  G
Sbjct:   94 GVSMNRVDFAPGGTNPPHVHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLTKALRVEAGVVELLKSKFAAG 223          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: OXO1_HORVU (Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.115e-27
Identity = 60/131 (45.80%), Postives = 88/131 (67.18%), Query Frame = -1
Query:  174 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 566
            G+S  R+D+AP G  PPHIHPRA+EI +V++G L VG + S    N L ++V+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +  T+FG++P I    L KA +++  +V+ L++KF  G+
Sbjct:   71 GVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPGIVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKFAGGS 201          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL24_ARATH (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana GN=GLP10 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.902e-27
Identity = 65/128 (50.78%), Postives = 84/128 (65.62%), Query Frame = -1
Query:  186 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 566
            G+S  RIDYAP G  PPH HPRA+E+  VLEG L VGF+T+    N L AK + KG+VFVFP+GLIH+Q N  K   A+  SA NSQ PG  +IA T+F A P+I    L   FQ+  K ++ +++KF
Sbjct:   91 GVSLARIDYAPGGLNPPHTHPRATEVIFVLEGELDVGFITT---ANKLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLFTATPAIPDHVLTTTFQIGTKEIEKIKSKF 215          
The following BLAST results are available for this feature:
BLAST of DN617702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL23_ARATH1.317e-2849.61Germin-like protein subfamily 2 member 3 OS=Arabid... [more]
GL36_ORYSJ2.247e-2846.15Germin-like protein 3-6 OS=Oryza sativa subsp. jap... [more]
GL35_ORYSJ2.247e-2846.15Germin-like protein 3-5 OS=Oryza sativa subsp. jap... [more]
GL33_ORYSJ2.247e-2846.92Germin-like protein 3-3 OS=Oryza sativa subsp. jap... [more]
GL22_ARATH2.247e-2849.60Germin-like protein subfamily 2 member 2 OS=Arabid... [more]
GL11_ORYSJ2.247e-2851.97Germin-like protein 1-1 OS=Oryza sativa subsp. jap... [more]
GER2_WHEAT2.247e-2846.15Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 S... [more]
OXO2_HORVU8.537e-2845.38Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1[more]
OXO1_HORVU1.115e-2745.80Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1[more]
GL24_ARATH1.902e-2750.78Germin-like protein subfamily 2 member 4 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01J06_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001J06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617702 ID=DN617702; Name=DN617702; organism=Citrus sinensis; type=EST; length=566bp
CTAAATAAAAACAATAACAATTATGTTTATTACATGGCCACAGTCAGCCT
GGAGAGAGGTTCATGAGAGACCTCTTTTATTACATTAATTAAGATATGAT
AATCTGGAGATAAAGTAATACAGCCACTAGTGAAGAGGCCATTTATATTA
AAGCTCATTAATTCCTTCTCCTAATTGCCATTAATGAACTTATTTTGAAG
ATCTTTCACTATCTTTGGGTCCAACTGGAATGCCTTGCCAAGAAAATCGG
GATTGATTGAAGGATTGGCTCCAAAGACTGTGTCGGCTATGGTAACTTCA
CCCGGGAATTGGCTGTTTAGAGCAGAATAGGCAGCTGCATTTGTTTTTCC
AATGTTGAATTGGAAGTGAATCAAACCTTGTGGAAACACAAAAACATCTC
CCTTATTTAGAACTTTTGCGATGAGTGTGTTATTCAGTTGGTCTGATGTC
ACAAAACCGACATAAAGAGTTCCTTCCAGGACTAAGAAGATTTCGCTGGC
ACGGGGGTGAATGTGAGGTGGCCTTTGGCCATATGGTGCATAGTCAATAC
GGAATGCTGATATGCC
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