DN617702

Overview
NameDN617702
Unique NameDN617702
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length566
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10142 contig Csv1_Contig10142:345..910. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GER3_WHEAT (Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.902e-27
Identity = 59/131 (45.04%), Postives = 87/131 (66.41%), Query Frame = -1
Query:  174 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 566
            G+S  R+D+AP G  PPHIHPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+HFQFN+GKT A+     NSQ P  V +  T+FG+NP I    L KA +++  +V+ L++KF  G+
Sbjct:   94 GVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVFFNSQSPSVVFVPLTLFGSNPPIPKPVLTKALRVEAGVVELLKSKFAGGS 224          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL14_ORYSJ (Germin-like protein 1-4 OS=Oryza sativa subsp. japonica GN=Os01g0952100 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.237e-27
Identity = 61/131 (46.56%), Postives = 92/131 (70.23%), Query Frame = -1
Query:  186 GISAFRIDYAPYG-QRPPHIHPRASEIFLVLEGTLYVGFV--TSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFG-ANPSINPDFLGKAFQLDPKIVKDLQNKF 566
            G+S  R+DYAP+G   PPH HPRA+EI  V +G L VGFV  T+   ++ LI +V+ KG VFVFP+GL+H++ ++G+  A A SA +SQ PG    AD +FG ++P++  D L +AFQ+D  +V+++++KF
Sbjct:  102 GVSMARVDYAPWGGANPPHSHPRATEILFVADGLLEVGFVVATAAPASSRLITRVVPKGGVFVFPRGLLHYERSVGEKPAVAISAFDSQLPGTQAAADALFGSSSPAVPTDVLARAFQVDGGVVENIKSKF 232          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL38_ORYSJ (Germin-like protein 3-8 OS=Oryza sativa subsp. japonica GN=Os03g0804700 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.965e-25
Identity = 57/127 (44.88%), Postives = 81/127 (63.78%), Query Frame = -1
Query:  186 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 566
            G+S  R+D AP G  P H HPRA+E+  V+ G +  GFV++        +KVL +G+ FV P+G+IHFQ+N+G   A   +A NSQ PG V    T+FG++P I    L K+FQ+D KI+K L++KF
Sbjct:  102 GVSIGRVDLAPGGVNPLHSHPRATELIHVVAGRVLAGFVSTA---GEFYSKVLGEGETFVVPRGMIHFQYNVGGVAAQVITAFNSQMPGVVAAGSTLFGSDPEIPDAVLAKSFQVDAKIIKLLKSKF 225          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.726e-24
Identity = 55/99 (55.56%), Postives = 69/99 (69.70%), Query Frame = -1
Query:  270 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFG 566
            G+S  RIDYAP G  PPH HPRA+E+  VLEGTL VGF+T+    N LI++ L KGDVF FP+GL+HFQ N G   A+  +A NSQ PG  ++  T+FG
Sbjct:   92 GVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFLTTA---NKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGATLFG 187          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL37_ORYSJ (Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 7.479e-24
Identity = 55/127 (43.31%), Postives = 81/127 (63.78%), Query Frame = -1
Query:  186 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 566
            G++  R+D AP G  P H HPRA+E+  V+ G + VGFV++        +KV+ +G+ F  P+GL+HFQ+N G  +A A +  NSQ PG V  A  +FGA+P I    L K+FQ+D +I+K L++KF
Sbjct:  108 GVAINRVDLAPGGVNPLHSHPRAAELVHVITGRMLVGFVSTA---GKYYSKVVGEGETFAIPRGLMHFQYNPGNASARAMTVFNSQLPGVVPAATALFGADPEIPDAVLAKSFQVDAEIIKLLKSKF 231          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL51_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0197200 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.712e-23
Identity = 60/128 (46.88%), Postives = 78/128 (60.94%), Query Frame = -1
Query:  183 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFI 566
            G SA R+D AP G  PPH HPRASE  +VL G +Y GFVTS   ++ ++AKVL +GDVF  PQGL+HF  N G   AA Y++L+SQ PG V +AD +  A   +  D + K    D   V  ++  FI
Sbjct:  102 GASAARVDVAPGGVFPPHYHPRASETAVVLAGAVYFGFVTSYP-DSRVVAKVLRRGDVFAVPQGLVHFLHNNGSEPAALYASLSSQNPGLVLVADALLAA--PLPVDLVAKTLLTDEATVDKIRANFI 226          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL32_ARATH (Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana GN=At3g10080 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.359e-22
Identity = 56/127 (44.09%), Postives = 76/127 (59.84%), Query Frame = -1
Query:  186 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 566
            GIS  R D  P    PPH HPRA+E+  +++G +Y GFV S   NN + AKV+ +G++ V+P+GL+HFQ N+G   A     LNSQ PG   I   VFG+   IN + L KAF L  K +  L+ +F
Sbjct:   98 GISFVRADLKPGSINPPHYHPRATEVAHLVKGRVYSGFVDS---NNKVYAKVMEEGEMMVYPKGLVHFQMNVGDVTATIVGGLNSQNPGIQKIPSVVFGS--GINEELLMKAFGLSLKQIGTLKKRF 219          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL24_ORYSJ (Germin-like protein 2-4 OS=Oryza sativa subsp. japonica GN=Os02g0532500 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.000e-22
Identity = 60/128 (46.88%), Postives = 76/128 (59.38%), Query Frame = -1
Query:  186 GISAFRIDY-APYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 566
            G+S  R D  A  G  PPH HPRA+E  LVL G +Y GFV S      L AKVL +G+V VFP+ ++HFQ N+G T A  Y A NS+ PG V I  TVFG+   I    L +AF L P  ++ L+ +F
Sbjct:   97 GMSFARADLSAAGGVNPPHYHPRATETALVLAGRVYAGFVDS---GGRLFAKVLEQGEVMVFPRAMVHFQLNVGDTPATVYGAFNSENPGIVRIPATVFGS--GIREAVLERAFGLTPAELRRLEKRF 219          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL12_ORYSJ (Germin-like protein 1-2 OS=Oryza sativa subsp. japonica GN=Os01g0705100 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.537e-21
Identity = 54/127 (42.52%), Postives = 76/127 (59.84%), Query Frame = -1
Query:  186 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 566
            G+S  R D AP G  PPH HPRASE+ LVL G + VGF T+    N L +KV+ + ++FV P+GL HFQ N+G  NA+  +  +SQ PG VT    +F   P++  + L K F +    V  +++KF
Sbjct:   98 GLSITRTDLAPGGLNPPHSHPRASELVLVLSGEVMVGFTTAA---NRLFSKVVREKELFVVPRGLQHFQLNVGAGNASFVAMFDSQSPGLVTPTFALFATQPAMPMEVLAKTFLMGEDEVGAIKSKF 221          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GLT3_ARATH (Germin-like protein subfamily T member 3 OS=Arabidopsis thaliana GN=At1g74820 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 7.739e-21
Identity = 50/127 (39.37%), Postives = 75/127 (59.06%), Query Frame = -1
Query:  186 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 566
            GIS + +  AP G   PH HP  +E  +V+EG++ VGF+T+   N TL +KV+  GD+FV P GLIH++ N+GKT     + +    P EV +  T+    P+I  + L  AF+ D K +  L++KF
Sbjct:  102 GISMYNVAIAPGGYNQPHSHPGVTEAGVVIEGSVLVGFLTT---NYTLYSKVIGPGDMFVIPPGLIHYEGNVGKTQCRLLTVVADDLPSEVGVPHTLLATKPAIPNEVLISAFKADSKTINMLRSKF 225          
The following BLAST results are available for this feature:
BLAST of DN617702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GER3_WHEAT1.902e-2745.04Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 S... [more]
GL14_ORYSJ4.237e-2746.56Germin-like protein 1-4 OS=Oryza sativa subsp. jap... [more]
GL38_ORYSJ3.965e-2544.88Germin-like protein 3-8 OS=Oryza sativa subsp. jap... [more]
GL21_ARATH5.726e-2455.56Germin-like protein subfamily 2 member 1 OS=Arabid... [more]
GL37_ORYSJ7.479e-2443.31Germin-like protein 3-7 OS=Oryza sativa subsp. jap... [more]
GL51_ORYSJ3.712e-2346.88Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]
GL32_ARATH5.359e-2244.09Germin-like protein subfamily 3 member 2 OS=Arabid... [more]
GL24_ORYSJ7.000e-2246.88Germin-like protein 2-4 OS=Oryza sativa subsp. jap... [more]
GL12_ORYSJ4.537e-2142.52Germin-like protein 1-2 OS=Oryza sativa subsp. jap... [more]
GLT3_ARATH7.739e-2139.37Germin-like protein subfamily T member 3 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01J06_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001J06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617702 ID=DN617702; Name=DN617702; organism=Citrus sinensis; type=EST; length=566bp
CTAAATAAAAACAATAACAATTATGTTTATTACATGGCCACAGTCAGCCT
GGAGAGAGGTTCATGAGAGACCTCTTTTATTACATTAATTAAGATATGAT
AATCTGGAGATAAAGTAATACAGCCACTAGTGAAGAGGCCATTTATATTA
AAGCTCATTAATTCCTTCTCCTAATTGCCATTAATGAACTTATTTTGAAG
ATCTTTCACTATCTTTGGGTCCAACTGGAATGCCTTGCCAAGAAAATCGG
GATTGATTGAAGGATTGGCTCCAAAGACTGTGTCGGCTATGGTAACTTCA
CCCGGGAATTGGCTGTTTAGAGCAGAATAGGCAGCTGCATTTGTTTTTCC
AATGTTGAATTGGAAGTGAATCAAACCTTGTGGAAACACAAAAACATCTC
CCTTATTTAGAACTTTTGCGATGAGTGTGTTATTCAGTTGGTCTGATGTC
ACAAAACCGACATAAAGAGTTCCTTCCAGGACTAAGAAGATTTCGCTGGC
ACGGGGGTGAATGTGAGGTGGCCTTTGGCCATATGGTGCATAGTCAATAC
GGAATGCTGATATGCC
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