DN617702

Overview
NameDN617702
Unique NameDN617702
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length566
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10142 contig Csv1_Contig10142:345..910. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL813_ORYSJ (Germin-like protein 8-13 OS=Oryza sativa subsp. japonica GN=Os08g0459700 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 9.460e-19
Identity = 54/127 (42.52%), Postives = 77/127 (60.63%), Query Frame = -1
Query:  186 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 566
            GISA R+D  P G  P H HP  SE+  VL+G L  GF++S   +N +  K ++KG +FVFPQGL+HFQ+N G T A A++A +S  PG + I D    AN ++   ++ K   L    V+ L++KF
Sbjct:   93 GISASRVDILPGGVVPLHTHPAGSELLYVLDGALVAGFISSS--DNKVYYKEVSKGGMFVFPQGLLHFQYNTGDTTAVAFAAYSSSNPG-LQILDYALFAN-NLPTSYVVKGTFLAEAEVRRLKSKF 215          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL93_ORYSJ (Germin-like protein 9-3 OS=Oryza sativa subsp. japonica GN=Os09g0568700 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.614e-18
Identity = 50/116 (43.10%), Postives = 70/116 (60.34%), Query Frame = -1
Query:  195 YAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQ 542
            Y P    PPH HPR++E+ L+++G L VGFV +    N L  + L  GD+FVFP+G++HFQFN G   A A SA  S   G V++  TVFG N  I+   L K+F+ D   ++ L+
Sbjct:   95 YPPATLNPPHTHPRSAELLLLVDGALSVGFVDT---TNKLYTQDLAAGDMFVFPKGMVHFQFNSGNQPAMALSAFGSAAAGLVSVPVTVFGTN--IDDAVLAKSFKTDVPTIQKLK 205          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL92_ORYSJ (Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica GN=Os09g0568600 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.614e-18
Identity = 52/121 (42.98%), Postives = 72/121 (59.50%), Query Frame = -1
Query:  204 ISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLD-PKIVK 563
            +S   + + P    PPH HPR++E+ LV++G L VGF+ +    N L  + L  GD+FVFP+G++HFQFN G   A A SA  S  PG V +  TVFG    I+   L K+F+ D P I+K
Sbjct:   88 VSYATLVFPPSTVNPPHTHPRSAELLLVVDGALSVGFIDT---TNKLYTQDLAAGDMFVFPKGMVHFQFNSGNQPAMALSAFGSAAPGVVPVPVTVFGT--GIDDAVLAKSFKTDVPTILK 203          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: AB19B_PRUPE (Auxin-binding protein ABP19b OS=Prunus persica GN=ABP19B PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.108e-18
Identity = 54/124 (43.55%), Postives = 71/124 (57.26%), Query Frame = -1
Query:  195 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQ 566
            GIS  R+D  P G  P H HP ASE+ LV++GT+  GFV SD   NT   K L KGD+ VFPQGL+HFQ N G T A A+ + +S  PG + I D     N  +  + + +   LD   +K L+
Sbjct:   84 GISLARLDLGPGGVVPFHTHPGASEVLLVVQGTIIAGFVASD---NTPYLKTLKKGDIIVFPQGLLHFQVNGGDTPAIAFPSFSSPSPG-LQIVDFALFKN-DLATELIAQTTLLDAPQIKKLK 202          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GLP1_BRANA (Germin-like protein 1 OS=Brassica napus GN=GER1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.695e-18
Identity = 53/124 (42.74%), Postives = 72/124 (58.06%), Query Frame = -1
Query:  195 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQ 566
            GIS  R+D AP G  P H HP ASE+  VL+G++  GF++S    N++  + L  G V VFPQGL+HFQ N GKT AAA    +S  PG + I D    AN +++ + +     L P  VK L+
Sbjct:   82 GISTARLDLAPKGVIPMHTHPGASEVLFVLDGSITAGFISSA---NSVYVQTLKPGQVMVFPQGLLHFQINAGKTPAAALVTFSSASPG-LQILDFALFAN-TLSTELVSATTFLPPATVKTLK 200          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: AB19A_PRUPE (Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.695e-18
Identity = 54/124 (43.55%), Postives = 71/124 (57.26%), Query Frame = -1
Query:  195 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQ 566
            GIS  R+D  P G  P H HP ASE+ LV++GT+  GFV SD   NT   K L KGD+ VFPQGL+HFQ N G T A A+ + +S  PG + I D     N  +  + + +   LD   +K L+
Sbjct:   84 GISLARLDLGPGGVIPFHTHPGASEVLLVVQGTIIAGFVASD---NTPYLKTLKKGDIMVFPQGLLHFQVNGGGTPALAFPSFSSPSPG-LQILDFALFKN-DLPTELIAQTTFLDAAQIKKLK 202          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL31_ORYSJ (Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179000 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.046e-17
Identity = 49/125 (39.20%), Postives = 72/125 (57.60%), Query Frame = -1
Query:  195 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIG-KTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQ 566
            G++  RID AP G  PPH HPRASE  LVL G++ VGF  +   +  L  ++L  G+ FVFP+ ++HF +N+     A   S LNSQ PG   +  + F   P +  + L KAF++  + V+ +Q
Sbjct:   98 GLAMARIDLAPGGMAPPHSHPRASEAALVLSGSVLVGFADT---SYRLYTQLLRAGEAFVFPRAMVHFLYNMDTAAPAVVLSGLNSQSPGAQLVPFSAFRTEPRLPDEVLKKAFKITGQDVQRIQ 219          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL31_ARATH (Germin-like protein subfamily 3 member 1 OS=Arabidopsis thaliana GN=GLP1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.330e-17
Identity = 54/124 (43.55%), Postives = 69/124 (55.65%), Query Frame = -1
Query:  195 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQ 566
            G+S  R+D AP G  P H HP ASE+  VL G++  GFV+S    N +  + L  G V VFPQGL+HFQ N GK++A+A    NS  PG + I D    AN       +G  F LD   VK L+
Sbjct:   83 GLSTARLDLAPKGVIPMHTHPGASEVLFVLTGSITAGFVSSA---NAVYVQTLKPGQVMVFPQGLLHFQINAGKSSASAVVTFNSANPG-LQILDFALFANSLPTELVVGTTF-LDATTVKKLK 201          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL91_ORYSJ (Germin-like protein 9-1 OS=Oryza sativa subsp. japonica GN=Os09g0568500 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.975e-17
Identity = 47/110 (42.73%), Postives = 68/110 (61.82%), Query Frame = -1
Query:  195 PPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIG-KTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQ 521
            PPHIHPRASE+ +V++G L VG V + + N T+  + L  GD+FVFP+G++HFQFN G    A A+SA  S  PG +++   +FG+   I+   L K+   D   V  L+
Sbjct:   98 PPHIHPRASELLVVVQGPLLVGLVDAAR-NGTVYTQTLQTGDMFVFPKGMVHFQFNNGTDVVARAFSAFGSATPGTISLPAALFGS--GIDDTILDKSMHTDQATVDQLK 204          
BLAST of DN617702 vs. ExPASy Swiss-Prot
Match: GL814_ORYSJ (Germin-like protein 8-14 OS=Oryza sativa subsp. japonica GN=GER5 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.780e-17
Identity = 52/125 (41.60%), Postives = 73/125 (58.40%), Query Frame = -1
Query:  192 GISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQN 566
            GISA R+D A  G  P H HP ASE+  V +GT+  GF+TS   +NT+  + L  GD+ VFPQGL+H+Q+N G++ A A  A +   PG + I D    AN ++    + K   LD   VK L++
Sbjct:   87 GISAARLDIAVGGVVPLHTHPAASELLFVTQGTVAAGFITSS--SNTVYTRTLYAGDIMVFPQGLLHYQYNAGQSAAVALVAFSGPNPG-LQITDYALFAN-NLPSAIVEKVTFLDDAQVKKLKS 207          
The following BLAST results are available for this feature:
BLAST of DN617702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL813_ORYSJ9.460e-1942.52Germin-like protein 8-13 OS=Oryza sativa subsp. ja... [more]
GL93_ORYSJ1.614e-1843.10Germin-like protein 9-3 OS=Oryza sativa subsp. jap... [more]
GL92_ORYSJ1.614e-1842.98Putative germin-like protein 9-2 OS=Oryza sativa s... [more]
AB19B_PRUPE2.108e-1843.55Auxin-binding protein ABP19b OS=Prunus persica GN=... [more]
GLP1_BRANA4.695e-1842.74Germin-like protein 1 OS=Brassica napus GN=GER1 PE... [more]
AB19A_PRUPE4.695e-1843.55Auxin-binding protein ABP19a OS=Prunus persica GN=... [more]
GL31_ORYSJ1.046e-1739.20Germin-like protein 3-1 OS=Oryza sativa subsp. jap... [more]
GL31_ARATH2.330e-1743.55Germin-like protein subfamily 3 member 1 OS=Arabid... [more]
GL91_ORYSJ3.975e-1742.73Germin-like protein 9-1 OS=Oryza sativa subsp. jap... [more]
GL814_ORYSJ6.780e-1741.60Germin-like protein 8-14 OS=Oryza sativa subsp. ja... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01J06_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001J06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617702 ID=DN617702; Name=DN617702; organism=Citrus sinensis; type=EST; length=566bp
CTAAATAAAAACAATAACAATTATGTTTATTACATGGCCACAGTCAGCCT
GGAGAGAGGTTCATGAGAGACCTCTTTTATTACATTAATTAAGATATGAT
AATCTGGAGATAAAGTAATACAGCCACTAGTGAAGAGGCCATTTATATTA
AAGCTCATTAATTCCTTCTCCTAATTGCCATTAATGAACTTATTTTGAAG
ATCTTTCACTATCTTTGGGTCCAACTGGAATGCCTTGCCAAGAAAATCGG
GATTGATTGAAGGATTGGCTCCAAAGACTGTGTCGGCTATGGTAACTTCA
CCCGGGAATTGGCTGTTTAGAGCAGAATAGGCAGCTGCATTTGTTTTTCC
AATGTTGAATTGGAAGTGAATCAAACCTTGTGGAAACACAAAAACATCTC
CCTTATTTAGAACTTTTGCGATGAGTGTGTTATTCAGTTGGTCTGATGTC
ACAAAACCGACATAAAGAGTTCCTTCCAGGACTAAGAAGATTTCGCTGGC
ACGGGGGTGAATGTGAGGTGGCCTTTGGCCATATGGTGCATAGTCAATAC
GGAATGCTGATATGCC
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