DN617701

Overview
NameDN617701
Unique NameDN617701
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length750
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2200 contig Csv1_Contig2200:24..773. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617701 vs. ExPASy Swiss-Prot
Match: PEPT1_PSOOV (Peptidase 1 OS=Psoroptes ovis PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.679e-15
Identity = 64/221 (28.96%), Postives = 105/221 (47.51%), Query Frame = 1
Query:   91 FLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGA--RFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDG 747
            F+  ++S L +S+V       +  S  RT +E    F     KH     A  E  + F    E++          +  K  +N+F+D++ EE+++ +L +   + A +         +        +P+ +D R  G V ++K+Q +CGSCWAFS +A VE          + LSEQELVDC + +  GC G  +     +I  NG ++ E+ YPYKA +G
Sbjct:    3 FVLAIASLLVLSVVY------AYPSEIRTFEEFKKAFN----KHYVTPEAEQEARQNFLASLEHIE---------KAGKGRINQFSDMSLEEFKNQYLMSDQAYEALKKEFDLDAGAQACQIGAVNIPNEIDLRALGYVTKIKNQVACGSCWAFSGVATVESNYLSYDNVSLDLSEQELVDCASQH--GCGGDTVLNGLRYIQKNGVVE-EQSYPYKAREG 201          
BLAST of DN617701 vs. ExPASy Swiss-Prot
Match: PEPT1_EURMA (Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.421e-14
Identity = 54/186 (29.03%), Postives = 86/186 (46.24%), Query Frame = 1
Query:  199 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHL--GARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGS 750
            FE +     K Y    ++E   + F E+L++++ +       K  +N  +DL+ +E+++  L     F   +T                +LP  +D R    V  ++ QG CGSCWAFS +A+ E          + L+EQELVDC  +   GC+G  +    E+I  NG +  E  YPY A + S
Sbjct:   26 FEEFKKAFNKTYATPEKEEVARKNFLESLKYVESN-------KGAINHLSDLSLDEFKNQFLMNANAFEQLKTQFDLNAETYACSINSVSLPSELDLRSLRTVTPIRMQGGCGSCWAFSGVASTESAYLAYRNMSLDLAEQELVDC--ASQNGCHGDTIPRGIEYIQQNGVVQ-EHYYPYVAREQS 201          
BLAST of DN617701 vs. ExPASy Swiss-Prot
Match: CYSP3_CARCN (Cysteine proteinase 3 (Fragment) OS=Carica candamarcensis PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.424e-14
Identity = 35/42 (83.33%), Postives = 38/42 (90.48%), Query Frame = 1
Query:  466 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG 591
            P+S+DWRKKGAV  VK+QGSCGSCWAFSTIA VEGINKIV G
Sbjct:    2 PESIDWRKKGAVTPVKNQGSCGSCWAFSTIATVEGINKIVHG 43          
BLAST of DN617701 vs. ExPASy Swiss-Prot
Match: PEPT1_DERPT (Peptidase 1 OS=Dermatophagoides pteronyssinus GN=DERP1 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 7.053e-14
Identity = 53/186 (28.49%), Postives = 86/186 (46.24%), Query Frame = 1
Query:  199 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHL--GARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGS 750
            FE +     K+Y    ++E   + F E+++++  +          +N  +DL+ +E+++  L     F   +T              G A P  +D R+   V  ++ QG CGSCWAFS +AA E          + L+EQELVDC + +  GC+G  +    E+I  NG +  E  Y Y A + S
Sbjct:   26 FEEYKKAFNKSYATFEDEEAARKNFLESVKYVQSNGG-------AINHLSDLSLDEFKNRFLMSAEAFEHLKTQFDLNAETNACSINGNA-PAEIDLRQMRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNQSLDLAEQELVDCASQH--GCHGDTIPRGIEYIQHNGVVQ-ESYYRYVAREQS 200          
BLAST of DN617701 vs. ExPASy Swiss-Prot
Match: CYSP4_CARCN (Cysteine proteinase 4 (Fragment) OS=Carica candamarcensis PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.053e-14
Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 1
Query:  466 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG 591
            P+S+DWRKKGAV  VK+QGSCGSCWAFSTI  VEGINKI TG
Sbjct:    2 PESIDWRKKGAVTPVKNQGSCGSCWAFSTIVTVEGINKIRTG 43          
BLAST of DN617701 vs. ExPASy Swiss-Prot
Match: CYSP2_CARCN (Cysteine proteinase 2 (Fragment) OS=Carica candamarcensis PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.203e-13
Identity = 34/42 (80.95%), Postives = 36/42 (85.71%), Query Frame = 1
Query:  466 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG 591
            P SVDWR+KGAV  VKDQ  CGSCWAFST+A VEGINKIVTG
Sbjct:    2 PGSVDWRQKGAVTPVKDQNPCGSCWAFSTVATVEGINKIVTG 43          
BLAST of DN617701 vs. ExPASy Swiss-Prot
Match: CATB3_GIALA (Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11
Identity = 51/153 (33.33%), Postives = 75/153 (49.02%), Query Frame = 1
Query:  307 SENRTYKVGL-NRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPR---VGEALPDSVDWRKK--GAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG---SLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKA 738
            S N  +K G+  RF  LT +E  S+ +   F         KR    +PR        PDS D+R++    + EV DQG CGSCWAFS++A+V G  +   G     +  S Q +V CD   +  C+GG +   + F+    G  T+E  PY++
Sbjct:   26 SLNPRWKAGIPKRFEGLTKDEISSLLMPVSF--------LKRDRAAVPRGTVSATQAPDSFDFREEYPHCIPEVVDQGGCGSCWAFSSVASV-GDRRCFAGLDKKAVKYSPQYVVSCDRG-DMACDGGWLPSVWRFLTKT-GTTTDECVPYQS 167          
BLAST of DN617701 vs. ExPASy Swiss-Prot
Match: CATB2_GIALA (Cathepsin B-like CP2 OS=Giardia lamblia GN=CP2 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11
Identity = 50/152 (32.89%), Postives = 79/152 (51.97%), Query Frame = 1
Query:  307 SENRTYKVGL-NRFADLTNEEYRSMHLGARF--GAKRTSLKSKRSNRYLPRVGEALPDSVDWRKK--GAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG---SLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKA 738
            S N  +K G+  RF  LT +E  S+ +   F   AK  + +   +++      + +P+S D+R++    + EV DQG CGSCWAFS++A   G  + V G     +  S Q +V CD   +  CNGG +   ++F+    G  T+E  PYK+
Sbjct:   26 SLNPRWKAGIPKRFEGLTKDEISSLLMPVSFLKNAKGAAPRGTFTDK------DDVPESFDFREEYPHCIPEVVDQGGCGSCWAFSSVATF-GDRRCVAGLDKKPVKYSPQYVVSCDHG-DMACNGGWLPNVWKFLTKT-GTTTDECVPYKS 168          
The following BLAST results are available for this feature:
BLAST of DN617701 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
PEPT1_PSOOV1.679e-1528.96Peptidase 1 OS=Psoroptes ovis PE=1 SV=1[more]
PEPT1_EURMA1.421e-1429.03Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV... [more]
CYSP3_CARCN2.424e-1483.33Cysteine proteinase 3 (Fragment) OS=Carica candama... [more]
PEPT1_DERPT7.053e-1428.49Peptidase 1 OS=Dermatophagoides pteronyssinus GN=D... [more]
CYSP4_CARCN7.053e-1480.95Cysteine proteinase 4 (Fragment) OS=Carica candama... [more]
CYSP2_CARCN1.203e-1380.95Cysteine proteinase 2 (Fragment) OS=Carica candama... [more]
CATB3_GIALA9.533e-1133.33Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=... [more]
CATB2_GIALA9.533e-1132.89Cathepsin B-like CP2 OS=Giardia lamblia GN=CP2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01J05_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001J05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617701 ID=DN617701; Name=DN617701; organism=Citrus sinensis; type=EST; length=750bp
CCATCTTCTTCTCCCAAAAAGAAAAAAAAAAAGTTCTTTTCTCAAAAGAT
GGGTTTGTTTAGATCACCAACCATGGCCATGTTTTTACTTTTTCTCTTCA
CTGTTTCATCTGCCTTGGACATGTCGATTGTATCTTATGATAAAACCCAT
GAGTCAAAATCTAGCAGCTGGAGGACCGACGATGAGGTTATGGCTATGTT
CGAGGCCTGGCTCGTGAAGCATGGCAAGGCTTATAACGCTTTGGGTGAAA
AAGAGAAGAGGTTTGAGATCTTTAAGGAAAATCTTAGGTTTATTGATGAA
CATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAACCGGTTTGCTGA
TTTGACCAACGAGGAGTACCGGTCCATGCATCTGGGTGCACGCTTTGGTG
CTAAAAGGACTTCCTTGAAATCAAAGAGGAGCAACCGTTATCTGCCACGT
GTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGGAGCTGT
CGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAA
CCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGCCTGATC
TCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAATGAAGG
ATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTGATAATG
GAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGATGGTAGC
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