DN617697
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_METTH (30S ribosomal protein S11P OS=Methanobacterium thermoautotrophicum GN=rps11p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.732e-16 Identity = 45/79 (56.96%), Postives = 54/79 (68.35%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 242 V+ADR ESSP+AAM AA + KE GI LHIK+RA AQ+A+RALAR+GM+IG+IEDVTPIP D T Sbjct: 41 VRADRQESSPFAAMEAATRAADDAKEKGIVGLHIKVRAPGGNGPRTPGPGAQAAIRALARAGMRIGKIEDVTPIPHDGT 119
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_METB6 (30S ribosomal protein S11P OS=Methanoregula boonei (strain 6A8) GN=rps11p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.732e-16 Identity = 43/78 (55.13%), Postives = 55/78 (70.51%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 239 VK DR+ESSPYAAM A +V+ +E GI +H+K+RA AQ+A+RALAR+GM+IGRIEDVTP+P DS Sbjct: 43 VKQDRNESSPYAAMQMAANVAAIAREKGIVGVHVKVRAPGQGKQRSPGPGAQAAIRALARAGMRIGRIEDVTPVPHDS 120
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_AERPE (30S ribosomal protein S11P OS=Aeropyrum pernix GN=rps11p PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 1.732e-16 Identity = 44/79 (55.70%), Postives = 55/79 (69.62%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 242 VKADR++ SPYAAM+AA + + E GI A+HIK+RA AQ+A+RALAR+G IGRIEDVTPIP D+T Sbjct: 44 VKADREKPSPYAAMIAASRAAQKAMERGIAAIHIKVRAPGGHGPKTPGPGAQAAIRALARAGFIIGRIEDVTPIPHDTT 122
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_SULTO (30S ribosomal protein S11P OS=Sulfolobus tokodaii GN=rps11p PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 2.262e-16 Identity = 45/78 (57.69%), Postives = 54/78 (69.23%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 239 VKADR++ SPYAAMLAA +T + GI+A+HIK+RA AQ A+RALAR+G IGRIEDVTPIP DS Sbjct: 43 VKADREKPSPYAAMLAANKAATEAFDKGISAIHIKVRAQGGYGSKTPGPGAQPAIRALARAGFIIGRIEDVTPIPHDS 120
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_SULSO (30S ribosomal protein S11P OS=Sulfolobus solfataricus GN=rps11p PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 2.262e-16 Identity = 46/78 (58.97%), Postives = 54/78 (69.23%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 239 VKADR++SSPYAAMLAA ++ E GI ALHIK+RA AQ A+RALAR+G IGRIEDVTPIP D+ Sbjct: 43 VKADREKSSPYAAMLAANKAASDALEKGIMALHIKVRAPGGYGSKTPGPGAQPAIRALARAGFIIGRIEDVTPIPHDT 120
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_METTP (30S ribosomal protein S11P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps11p PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.858e-16 Identity = 43/79 (54.43%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 242 VKA RDESSPY AM A V+ + K GI +H+K+RA AQ+A+RALAR+G++IGRIEDVTPIP D T Sbjct: 40 VKAARDESSPYTAMQMAMQVAEQAKAKGIVGVHVKVRAPGGNKQRSPGPGAQAAIRALARAGLRIGRIEDVTPIPHDGT 118
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_HYPBU (30S ribosomal protein S11P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps11p PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.858e-16 Identity = 44/79 (55.70%), Postives = 55/79 (69.62%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 242 VKADR++ SPYAAMLAA + + + GI ALHIK+RA AQ+A+RALAR+G IGRIEDVTP+P D+T Sbjct: 44 VKADREKPSPYAAMLAASRAAQQAMDRGIMALHIKVRAPGGHGPKTPGPGAQAAIRALARAGFIIGRIEDVTPLPHDTT 122
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_METST (30S ribosomal protein S11P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps11p PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.039e-16 Identity = 44/79 (55.70%), Postives = 54/79 (68.35%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 242 V++DR ESSP+AAM AA V+ KE GI LHIK+RA AQ+ +RALAR+G+KIG+IEDVTPIP D T Sbjct: 41 VRSDRQESSPFAAMEAANRVADDIKEKGIAGLHIKVRASGGNGPRTPGPGAQATIRALARAGIKIGKIEDVTPIPHDGT 119
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_METHJ (30S ribosomal protein S11P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps11p PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.039e-16 Identity = 43/78 (55.13%), Postives = 54/78 (69.23%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 239 VK DR+ESSPYAAM A +V+ +E GI LH+K+RA AQ+A+RALAR+GM+IG IEDVTP+P DS Sbjct: 42 VKQDRNESSPYAAMQMAGNVAQAAREKGIVGLHVKVRAPGRGKQRSPGPGAQAAIRALARAGMRIGLIEDVTPVPHDS 119
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS14_ENCCU (40S ribosomal protein S14 OS=Encephalitozoon cuniculi GN=RPS14 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 6.581e-16 Identity = 41/78 (52.56%), Postives = 52/78 (66.67%), Query Frame = 3 Query: 3 KVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTD 236 +VKA RDE SPYAAMLAAQDV+T+ G+ LH KLR AQ+A+R L R+G+++GRIEDVTP+ D Sbjct: 44 RVKAQRDEGSPYAAMLAAQDVATKILGRGVKVLHFKLRGAGGVKPMALGPGAQTAIRTLIRAGLRVGRIEDVTPVARD 121 The following BLAST results are available for this feature:
BLAST of DN617697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617697 ID=DN617697; Name=DN617697; organism=Citrus sinensis; type=EST; length=484bpback to top |