DN617697
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_IGNH4 (30S ribosomal protein S11P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps11p PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 8.595e-16 Identity = 43/78 (55.13%), Postives = 54/78 (69.23%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 239 VKAD ++ SPYAAM+AA + + E GITA+HIK+RA AQ+A+RALARSG IGRIEDVTP+P D+ Sbjct: 41 VKADHEKPSPYAAMIAAARAAQQAMERGITAIHIKVRAPGGYGPKTPGPGAQAAIRALARSGFIIGRIEDVTPLPHDT 118
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_UNCMA (30S ribosomal protein S11P OS=Uncultured methanogenic archaeon RC-I GN=rps11p PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.122e-15 Identity = 42/79 (53.16%), Postives = 55/79 (69.62%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 242 VK DR+ESSPYAAM A +V+ + K GI +HI++RA AQ+A+R+LAR+G++IGRIEDVTPIP D T Sbjct: 43 VKQDRNESSPYAAMQMAMNVAEQIKAKGIQGVHIRVRAPGGNHQRSPGPGAQAAIRSLARAGLRIGRIEDVTPIPHDGT 121
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_METLZ (30S ribosomal protein S11P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps11p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.466e-15 Identity = 42/78 (53.85%), Postives = 55/78 (70.51%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 239 VK R+ESSPYAAM A +++ K+ GIT LHI++RA AQ+A+RAL+R+GM+IGRIEDVTP+P DS Sbjct: 42 VKQARNESSPYAAMQMAINIAQASKDKGITGLHIRVRAPGNGRQRSPGPGAQAAIRALSRAGMRIGRIEDVTPVPHDS 119
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_SULAC (30S ribosomal protein S11P OS=Sulfolobus acidocaldarius GN=rps11p PE=3 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 5.571e-15 Identity = 42/78 (53.85%), Postives = 53/78 (67.95%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 239 VKADR++ SPYAAMLAA + + GI+A+HIK+RA AQ A+RALAR+G IGRIEDVTP+P D+ Sbjct: 43 VKADREKPSPYAAMLAANKAANDAFDKGISAIHIKVRAQGGYGSKTPGPGAQPAIRALARAGFIIGRIEDVTPLPHDT 120
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_METS5 (30S ribosomal protein S11P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rps11p PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.571e-15 Identity = 42/78 (53.85%), Postives = 53/78 (67.95%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 239 VKADR++ SPYAAMLAA ++ + G+ A+HIK+RA AQ A+R+LARSG IGRIEDVTPIP D+ Sbjct: 43 VKADREKPSPYAAMLAANKAASDALDKGLMAIHIKVRAPGGAGPKTPGPGAQPAIRSLARSGFIIGRIEDVTPIPHDT 120
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_METAC (30S ribosomal protein S11P OS=Methanosarcina acetivorans GN=rps11p PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.571e-15 Identity = 40/79 (50.63%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 242 VKA RDESSPY AM A ++ + K+ GI +HI++RA AQ+A+RA AR+G++IGRIEDVTP+P D T Sbjct: 40 VKAARDESSPYTAMQMAGQLADQLKDKGINGIHIRVRAPGGNKQRSPGPGAQAAIRAFARAGIRIGRIEDVTPVPHDGT 118
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_META3 (30S ribosomal protein S11P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps11p PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.571e-15 Identity = 42/79 (53.16%), Postives = 52/79 (65.82%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 242 VK +DESSPYAAM A ++ +E GI +HIK+RA AQ+A+RALAR+G+KIGRIED TPIP D T Sbjct: 39 VKNQKDESSPYAAMQGAFKIADMIREKGIDKVHIKVRATGGSKSKNPGPGAQAAIRALARAGIKIGRIEDATPIPHDGT 117
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_METS3 (30S ribosomal protein S11P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps11p PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15 Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 242 V+ADR ++SP+AAM AA ++ KE G LHI++RA AQ+ +RALAR+G+KIG+IED+TPIP D T Sbjct: 41 VRADRQQASPFAAMAAATRIADDAKEKGFVGLHIRVRAPGGNGHRSPGPGAQATIRALARAGIKIGKIEDITPIPHDGT 119
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_HALWD (30S ribosomal protein S11P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps11p PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.502e-15 Identity = 40/79 (50.63%), Postives = 52/79 (65.82%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 242 VK +RDE+SPYAAM A+ V+ K GI LH+++R AQ+ +RALAR+G++IGRIEDVTPIP D T Sbjct: 45 VKQNRDEASPYAAMQMAESVAEDIKAAGIDGLHVRVRGPGGNGNKSPGPGAQATIRALARAGLEIGRIEDVTPIPHDGT 123
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_METMA (30S ribosomal protein S11P OS=Methanosarcina mazei GN=rps11p PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.241e-14 Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 242 VKA RDESSPY AM A ++ + ++ GI +HI++RA AQ+A+RA AR+G++IGRIEDVTP+P D T Sbjct: 40 VKAARDESSPYTAMQMAGQLADQLRDKGINGIHIRVRAPGGNKQRSPGPGAQAAIRAFARAGIRIGRIEDVTPVPHDGT 118 The following BLAST results are available for this feature:
BLAST of DN617697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617697 ID=DN617697; Name=DN617697; organism=Citrus sinensis; type=EST; length=484bpback to top |