DN617697
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_METVS (30S ribosomal protein S11P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps11p PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.621e-14 Identity = 40/79 (50.63%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 242 V+ RDESSPYAAM AA ++ ++ GI +H+K+RA AQ+A+RAL+R+G+KIGRIED TPIP D T Sbjct: 39 VRNQRDESSPYAAMQAAFKIAELMRDKGIDQVHVKVRAAGGQKSKNPGPGAQAAIRALSRAGIKIGRIEDATPIPHDGT 117
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_METJA (30S ribosomal protein S11P OS=Methanocaldococcus jannaschii GN=rps11p PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.621e-14 Identity = 41/75 (54.67%), Postives = 51/75 (68.00%), Query Frame = 3 Query: 18 RDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 242 RDE SPYAAM AA ++ KE GI +HIK+RA AQ+A+RALAR+G++IGRIEDVTP+P D T Sbjct: 47 RDEGSPYAAMQAAFKLAEVLKERGIENIHIKVRAPGGSGQKNPGPGAQAAIRALARAGLRIGRIEDVTPVPHDGT 121
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_NATPD (30S ribosomal protein S11P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps11p PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.117e-14 Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 242 VK +RDE+SPYAAM A+ V+ K+ GI +H+++R AQ+ +RALAR+G++IGRIEDVTPIP D T Sbjct: 41 VKQNRDEASPYAAMQMAEVVAEDVKDAGIDGVHVRVRGPGGNQQQNPGPGAQATIRALARAGLEIGRIEDVTPIPHDGT 119
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_METBF (30S ribosomal protein S11P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps11p PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.117e-14 Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 242 VKA RDESSPY AM A ++ + ++ GI +HI++RA AQ+A+RA AR+G++IGRIEDVTP+P D T Sbjct: 40 VKAARDESSPYTAMQMAGQLADQLRDKGIHGIHIRVRAPGGNKQRSPGPGAQAAIRAFARAGIRIGRIEDVTPVPHDGT 118
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS14_TOBAC (40S ribosomal protein S14 (Fragment) OS=Nicotiana tabacum GN=RPS14 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.765e-14 Identity = 42/55 (76.36%), Postives = 42/55 (76.36%), Query Frame = 3 Query: 78 KELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 242 KELGI ALHIKLRA AQSALRALARSGMKIGRIEDVTPIPTDST Sbjct: 1 KELGINALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDST 55
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_THEAC (30S ribosomal protein S11P OS=Thermoplasma acidophilum GN=rps11p PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.611e-14 Identity = 44/79 (55.70%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 242 VK DRD++SPYAAM AA VS KE IT L IK+RA AQ+A+RAL+R+G+KI RIE+VTPIP D T Sbjct: 41 VKNDRDQASPYAAMKAADMVSEALKEKEITDLIIKVRAPGGNKSKIPGPGAQAAIRALSRAGLKIVRIEEVTPIPHDGT 119
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_PICTO (30S ribosomal protein S11P OS=Picrophilus torridus GN=rps11p PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.611e-14 Identity = 44/79 (55.70%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 242 VK DRDE+SPYAAM AA VS + +E IT L I++RA AQSA+RAL+R+G KI RIE+VTPIP D T Sbjct: 38 VKNDRDEASPYAAMRAADMVSEKLREREITDLIIRVRAPGGSKSKIPGPGAQSAIRALSRAGFKILRIEEVTPIPHDGT 116
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_METMP (30S ribosomal protein S11P OS=Methanococcus maripaludis GN=rps11p PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.611e-14 Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 242 V+ RDESSPYAAM AA ++ ++ GI +H+K+RA AQ+A+RAL+R+G++IGRIED TPIP D T Sbjct: 39 VRNQRDESSPYAAMQAAFKIADLMRDKGIDQVHVKVRATGGQKSKNPGPGAQAAIRALSRAGIRIGRIEDATPIPHDGT 117
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_METM7 (30S ribosomal protein S11P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps11p PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.611e-14 Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 242 V+ RDESSPYAAM AA ++ ++ GI +H+K+RA AQ+A+RAL+R+G++IGRIED TPIP D T Sbjct: 39 VRNQRDESSPYAAMQAAFKIADLMRDKGIDQVHVKVRATGGQKSKNPGPGAQAAIRALSRAGIRIGRIEDATPIPHDGT 117
BLAST of DN617697 vs. ExPASy Swiss-Prot
Match: RS11_METM5 (30S ribosomal protein S11P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps11p PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.611e-14 Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 6 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 242 V+ RDESSPYAAM AA ++ ++ GI +H+K+RA AQ+A+RAL+R+G++IGRIED TPIP D T Sbjct: 39 VRNQRDESSPYAAMQAAFKIADLMRDKGIDQVHVKVRATGGQKSKNPGPGAQAAIRALSRAGIRIGRIEDATPIPHDGT 117 The following BLAST results are available for this feature:
BLAST of DN617697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617697 ID=DN617697; Name=DN617697; organism=Citrus sinensis; type=EST; length=484bpback to top |