DN617696
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_METTH (30S ribosomal protein S11P OS=Methanobacterium thermoautotrophicum GN=rps11p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.798e-16 Identity = 46/79 (58.23%), Postives = 55/79 (69.62%), Query Frame = -3 Query: 244 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 480 V+ADR ESSP+AAM AA + KE GI LHIK+RA GAQ+A+RALAR+GM+IG+IEDVTPIP D T Sbjct: 41 VRADRQESSPFAAMEAATRAADDAKEKGIVGLHIKVRAPGGNGPRTPGPGAQAAIRALARAGMRIGKIEDVTPIPHDGT 119
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_METB6 (30S ribosomal protein S11P OS=Methanoregula boonei (strain 6A8) GN=rps11p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.798e-16 Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = -3 Query: 247 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDS 480 VK DR+ESSPYAAM A +V+ +E GI +H+K+RA GAQ+A+RALAR+GM+IGRIEDVTP+P DS Sbjct: 43 VKQDRNESSPYAAMQMAANVAAIAREKGIVGVHVKVRAPGQGKQRSPGPGAQAAIRALARAGMRIGRIEDVTPVPHDS 120
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_AERPE (30S ribosomal protein S11P OS=Aeropyrum pernix GN=rps11p PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 1.798e-16 Identity = 45/79 (56.96%), Postives = 56/79 (70.89%), Query Frame = -3 Query: 244 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 480 VKADR++ SPYAAM+AA + + E GI A+HIK+RA GAQ+A+RALAR+G IGRIEDVTPIP D+T Sbjct: 44 VKADREKPSPYAAMIAASRAAQKAMERGIAAIHIKVRAPGGHGPKTPGPGAQAAIRALARAGFIIGRIEDVTPIPHDTT 122
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_SULTO (30S ribosomal protein S11P OS=Sulfolobus tokodaii GN=rps11p PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 2.349e-16 Identity = 46/78 (58.97%), Postives = 55/78 (70.51%), Query Frame = -3 Query: 247 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDS 480 VKADR++ SPYAAMLAA +T + GI+A+HIK+RA GAQ A+RALAR+G IGRIEDVTPIP DS Sbjct: 43 VKADREKPSPYAAMLAANKAATEAFDKGISAIHIKVRAQGGYGSKTPGPGAQPAIRALARAGFIIGRIEDVTPIPHDS 120
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_SULSO (30S ribosomal protein S11P OS=Sulfolobus solfataricus GN=rps11p PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 2.349e-16 Identity = 47/78 (60.26%), Postives = 55/78 (70.51%), Query Frame = -3 Query: 247 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDS 480 VKADR++SSPYAAMLAA ++ E GI ALHIK+RA GAQ A+RALAR+G IGRIEDVTPIP D+ Sbjct: 43 VKADREKSSPYAAMLAANKAASDALEKGIMALHIKVRAPGGYGSKTPGPGAQPAIRALARAGFIIGRIEDVTPIPHDT 120
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_METTP (30S ribosomal protein S11P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps11p PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.006e-16 Identity = 44/79 (55.70%), Postives = 54/79 (68.35%), Query Frame = -3 Query: 244 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 480 VKA RDESSPY AM A V+ + K GI +H+K+RA GAQ+A+RALAR+G++IGRIEDVTPIP D T Sbjct: 40 VKAARDESSPYTAMQMAMQVAEQAKAKGIVGVHVKVRAPGGNKQRSPGPGAQAAIRALARAGLRIGRIEDVTPIPHDGT 118
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_HYPBU (30S ribosomal protein S11P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps11p PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.006e-16 Identity = 45/79 (56.96%), Postives = 56/79 (70.89%), Query Frame = -3 Query: 244 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 480 VKADR++ SPYAAMLAA + + + GI ALHIK+RA GAQ+A+RALAR+G IGRIEDVTP+P D+T Sbjct: 44 VKADREKPSPYAAMLAASRAAQQAMDRGIMALHIKVRAPGGHGPKTPGPGAQAAIRALARAGFIIGRIEDVTPLPHDTT 122
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS14_ENCCU (40S ribosomal protein S14 OS=Encephalitozoon cuniculi GN=RPS14 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.232e-16 Identity = 42/79 (53.16%), Postives = 54/79 (68.35%), Query Frame = -3 Query: 250 VKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTD 486 ++VKA RDE SPYAAMLAAQDV+T+ G+ LH KLR GAQ+A+R L R+G+++GRIEDVTP+ D Sbjct: 43 MRVKAQRDEGSPYAAMLAAQDVATKILGRGVKVLHFKLRGAGGVKPMALGPGAQTAIRTLIRAGLRVGRIEDVTPVARD 121
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_METST (30S ribosomal protein S11P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps11p PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.232e-16 Identity = 45/79 (56.96%), Postives = 55/79 (69.62%), Query Frame = -3 Query: 244 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 480 V++DR ESSP+AAM AA V+ KE GI LHIK+RA GAQ+ +RALAR+G+KIG+IEDVTPIP D T Sbjct: 41 VRSDRQESSPFAAMEAANRVADDIKEKGIAGLHIKVRASGGNGPRTPGPGAQATIRALARAGIKIGKIEDVTPIPHDGT 119
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_METHJ (30S ribosomal protein S11P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps11p PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.232e-16 Identity = 44/78 (56.41%), Postives = 55/78 (70.51%), Query Frame = -3 Query: 247 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDS 480 VK DR+ESSPYAAM A +V+ +E GI LH+K+RA GAQ+A+RALAR+GM+IG IEDVTP+P DS Sbjct: 42 VKQDRNESSPYAAMQMAGNVAQAAREKGIVGLHVKVRAPGRGKQRSPGPGAQAAIRALARAGMRIGLIEDVTPVPHDS 119 The following BLAST results are available for this feature:
BLAST of DN617696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617696 ID=DN617696; Name=DN617696; organism=Citrus sinensis; type=EST; length=488bpback to top |