DN617696
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_METM5 (30S ribosomal protein S11P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps11p PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.750e-14 Identity = 40/79 (50.63%), Postives = 54/79 (68.35%), Query Frame = -3 Query: 244 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 480 V+ RDESSPYAAM AA ++ ++ GI +H+K+RA GAQ+A+RAL+R+G++IGRIED TPIP D T Sbjct: 39 VRNQRDESSPYAAMQAAFKIADLMRDKGIDQVHVKVRATGGQKSKNPGPGAQAAIRALSRAGIRIGRIEDATPIPHDGT 117
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_METBU (30S ribosomal protein S11P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps11p PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.750e-14 Identity = 40/79 (50.63%), Postives = 53/79 (67.09%), Query Frame = -3 Query: 244 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 480 VKA RDESSPY AM A ++ ++ G+ +HIK+RA GAQ+A+RA AR+G++IGRIEDVTP+P D T Sbjct: 40 VKAARDESSPYTAMQMATQLADILRDKGLEGVHIKVRAPGGNKQRSPGPGAQAAIRAFARAGVRIGRIEDVTPVPHDGT 118
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_CALMQ (30S ribosomal protein S11P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps11p PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.750e-14 Identity = 42/78 (53.85%), Postives = 52/78 (66.67%), Query Frame = -3 Query: 247 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDS 480 VKADRD+ SPYAAM+AA + GI A+H+K+R GA +A+RALAR+GM IGRIEDVTPIP D+ Sbjct: 43 VKADRDKPSPYAAMMAAYKAAQIAMARGINAVHVKVRGPGGYGLKVPGPGAVAAIRALARAGMIIGRIEDVTPIPHDT 120
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_THEVO (30S ribosomal protein S11P OS=Thermoplasma volcanium GN=rps11p PE=3 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 4.897e-14 Identity = 45/79 (56.96%), Postives = 54/79 (68.35%), Query Frame = -3 Query: 244 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 480 VK DRD++SPYAAM AA VS KE IT L IK+RA GAQ+A+RAL+R+G+KI RIE+VTPIP D T Sbjct: 43 VKNDRDQASPYAAMKAADMVSETLKEHEITDLIIKVRAPGGNKSKIPGPGAQAAIRALSRAGLKIVRIEEVTPIPHDGT 121
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_HALSA (30S ribosomal protein S11P OS=Halobacterium salinarium GN=rps11p PE=3 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 4.897e-14 Identity = 39/79 (49.37%), Postives = 54/79 (68.35%), Query Frame = -3 Query: 244 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 480 VK +RDE+SPYAAM A+ ++ + GI +H+++R GAQ+A+RALAR+G++IGRIEDVTPIP D T Sbjct: 41 VKQNRDEASPYAAMQMAEQLAEEVLDQGIEKVHVRVRGPGGNLQRSPGPGAQAAIRALARAGLEIGRIEDVTPIPHDGT 119
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_PYRCJ (30S ribosomal protein S11P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rps11p PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 7.072e-13 Identity = 40/78 (51.28%), Postives = 51/78 (65.38%), Query Frame = -3 Query: 247 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDS 480 V+AD+D+ SP+AAM AA + GI A+HIK+R GA +A+RALARSG+ IGRIEDVTPIP D+ Sbjct: 52 VRADKDKPSPWAAMQAAYKAAQLALARGINAVHIKVRGPGGYGMKVPGPGASAAIRALARSGLVIGRIEDVTPIPHDT 129
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_PYRAR (30S ribosomal protein S11P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps11p PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 7.072e-13 Identity = 40/77 (51.95%), Postives = 50/77 (64.94%), Query Frame = -3 Query: 250 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTD 480 V+AD+D+ SP+AAM AA + GI A+HIK+R GA +A+RALARSG+ IGRIEDVTPIP D Sbjct: 49 VRADKDKPSPWAAMQAAYKAAQLAMARGINAVHIKVRGPGGYGMKVPGPGASAAIRALARSGLVIGRIEDVTPIPHD 125
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_PYRIL (30S ribosomal protein S11P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps11p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.236e-13 Identity = 40/78 (51.28%), Postives = 51/78 (65.38%), Query Frame = -3 Query: 247 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDS 480 V+AD+D+ SP+AAM AA + GI A+HIK+R GA +A+RALARSG+ IGRIEDVTPIP D+ Sbjct: 50 VRADKDKPSPWAAMQAAYKAAQLALARGINAVHIKVRGPGGYGMKVPGPGASAAIRALARSGLIIGRIEDVTPIPHDT 127
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_PYRAE (30S ribosomal protein S11P OS=Pyrobaculum aerophilum GN=rps11p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.236e-13 Identity = 40/77 (51.95%), Postives = 50/77 (64.94%), Query Frame = -3 Query: 250 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTD 480 V+AD+D+ SP+AAM AA + GI A+HIK+R GA +A+RALARSG+ IGRIEDVTPIP D Sbjct: 44 VRADKDKPSPWAAMQAAYKAAQLALARGINAVHIKVRGPGGYGMKVPGPGASAAIRALARSGLVIGRIEDVTPIPHD 120
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_HALMA (30S ribosomal protein S11P OS=Haloarcula marismortui GN=rps11p PE=1 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 2.687e-12 Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = -3 Query: 244 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 480 VK +RDE+SPYAAM A+ V+ + + G+ + +++R GAQ+ +RALAR+G++IGRIEDVTP P D T Sbjct: 43 VKQNRDEASPYAAMQMAEVVAEKALDRGVEGVDVRVRGPGGNLQTSPGPGAQATIRALARAGLEIGRIEDVTPTPHDGT 121 The following BLAST results are available for this feature:
BLAST of DN617696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617696 ID=DN617696; Name=DN617696; organism=Citrus sinensis; type=EST; length=488bpback to top |