DN617688
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617688 vs. ExPASy Swiss-Prot
Match: DIM1_YEAST (Dimethyladenosine transferase OS=Saccharomyces cerevisiae GN=DIM1 PE=1 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 5.608e-50 Identity = 94/182 (51.65%), Postives = 126/182 (69.23%), Query Frame = 1 Query: 1 RKEKGKQKSXXXXXXXXXXXXISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEVGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHL 546 +K G S F+ GQHILKNPL+ + IV KA I+ +DV+LE+GPGTGNLT ++LE K V+AVE+D RM EL +R + TP +L+++ GD +KT+LPYFDIC++N PYQISSPL FKL+ R +I+MFQ+EFA+RL+A+PGD LYCRLS N Q+ A V+H+ Sbjct: 7 KKYSGATSSKQVSAEKHLSSVFKFNTDLGQHILKNPLVAQGIVDKAQIRPSDVVLEVGPGTGNLTVRILEQAKNVVAVEMDPRMAAELTKRVRGTPVEKKLEIMLGDFMKTELPYFDICISNTPYQISSPLVFKLINQPRPPRVSILMFQREFALRLLARPGDSLYCRLSANVQMWANVTHI 188
BLAST of DN617688 vs. ExPASy Swiss-Prot
Match: DIM1_CANGA (Dimethyladenosine transferase OS=Candida glabrata GN=DIM1 PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 5.608e-50 Identity = 91/159 (57.23%), Postives = 121/159 (76.10%), Query Frame = 1 Query: 70 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEVGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHL 546 F+ GQHILKNPL+ + IV KA IK +D++LE+GPGTGNLT ++LE + V+AVE+D RM EL +R TP +L+++ GD +KT+LPYFDIC++N PYQISSPL FKL+ R +I+MFQ+EFAMRL+A+PGD LYCRLS N Q+ A V+H+ Sbjct: 30 FNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEQARKVVAVEMDPRMAAELTKRVHGTPAEKKLEIMLGDFMKTELPYFDICISNTPYQISSPLVFKLINQPRPPRVSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHI 188
BLAST of DN617688 vs. ExPASy Swiss-Prot
Match: DIM1_ASHGO (Dimethyladenosine transferase OS=Ashbya gossypii GN=DIM1 PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.249e-49 Identity = 91/159 (57.23%), Postives = 120/159 (75.47%), Query Frame = 1 Query: 70 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEVGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHL 546 F+ GQHILKNPL+ + IV KA IK +D++LE+GPGTGNLT ++LE + V+AVE D RM EL +R TP +L+++ GD +KT+LPYFDIC++N PYQISSPL FKL+ R +I+MFQ+EFAMRL+A+PGD LYCRLS N Q+ A V+H+ Sbjct: 30 FNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEQARKVVAVEFDPRMAAELTKRVHGTPAEKKLEIMLGDFMKTELPYFDICISNTPYQISSPLVFKLINQPRPPRVSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHV 188
BLAST of DN617688 vs. ExPASy Swiss-Prot
Match: DIM1_YARLI (Dimethyladenosine transferase OS=Yarrowia lipolytica GN=DIM1 PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 1.632e-49 Identity = 91/154 (59.09%), Postives = 119/154 (77.27%), Query Frame = 1 Query: 85 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEVGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHL 546 GQHILKNPL+ + IV K+ IK +D +LE+GPGTGNLT ++LE + VIAVE+D RM EL +R Q P +L+++ GD +KT+LPYFD+C++N PYQISSPL FKLL R +++MFQ EFAMRL+A+PGD LYCRLSVN Q+ A+VSH+ Sbjct: 35 GQHILKNPLVAQGIVDKSDIKPSDTVLEVGPGTGNLTVRILEKARKVIAVEMDPRMAAELTKRVQGKPEQKKLEIMLGDCIKTELPYFDVCISNTPYQISSPLVFKLLNQPRPPRVSVLMFQHEFAMRLLARPGDSLYCRLSVNVQMWAKVSHV 188
BLAST of DN617688 vs. ExPASy Swiss-Prot
Match: RSMA_METBU (Probable ribosomal RNA small subunit methyltransferase A OS=Methanococcoides burtonii (strain DSM 6242) GN=rsmA PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.876e-29 Identity = 72/148 (48.65%), Postives = 96/148 (64.86%), Query Frame = 1 Query: 88 QHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEVGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHA 531 QH L + ++SIV +A + DV+LEIG G GNLT++LLE V +ELD +V L+ RF + +L++I GDVLK DLP F+ VAN+PY ISSP+TFKL H+ F I+M+Q EFA R+VA+ + Y RLSVNT A Sbjct: 18 QHFLIDERSLDSIVDQAELSEKDVVLEIGGGIGNLTERLLEKAGKVYVIELDPALVHVLKDRFSD---NEKLEIIPGDVLKLDLPKFNKVVANLPYSISSPITFKLFKHE--FELGILMYQYEFAQRMVAKANTENYSRLSVNTHYFA 160
BLAST of DN617688 vs. ExPASy Swiss-Prot
Match: RSMA_METHJ (Probable ribosomal RNA small subunit methyltransferase A OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rsmA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 7.127e-29 Identity = 72/153 (47.06%), Postives = 97/153 (63.40%), Query Frame = 1 Query: 82 KGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEVGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVS 540 + QH L +P +V I I S ++LEIGPG G LT+ LLE G VI+VELD ++ L RRF S L ++QGD +K LP F+I +AN+PY ISSP+TF+LL F AI+M+QKEFA R++A PG + RLS+ Q +AR + Sbjct: 5 RDQHFLTDPRIVARIADILDI-SGRIVLEIGPGEGILTEALLERGARVISVELDRTLIERLSRRFASEIADGSLTLLQGDAVKVPLPPFEIVMANLPYSISSPITFRLL--DIGFEAAILMYQKEFADRMMAHPGTRDCGRLSIMLQTYARAN 154
BLAST of DN617688 vs. ExPASy Swiss-Prot
Match: RSMA_THEGJ (Probable ribosomal RNA small subunit methyltransferase A OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rsmA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.620e-28 Identity = 69/155 (44.52%), Postives = 104/155 (67.10%), Query Frame = 1 Query: 73 HKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEVGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARV 537 +++ GQ+ L P ++E V++A + D +LEIGPG G LT +L + V A+E DSRM+ LQR + S P +++I+GD +K + P F+ V+N+PYQISSP+TFKLL H+ F A++++Q EFA R++A+PGD+ Y RLS+ Q A V Sbjct: 17 NRTLGQNFLIVPDIIERNVKRAELSEKDTVLEIGPGLGVLTDELSKKAGKVYAIEADSRMIEILQREY-SWP---NVELIKGDAVKVEWPEFNKMVSNLPYQISSPVTFKLLKHE--FERAVLIYQLEFAERMIAKPGDRNYSRLSLMVQAKANV 165
BLAST of DN617688 vs. ExPASy Swiss-Prot
Match: RSMA_PYRAB (Probable ribosomal RNA small subunit methyltransferase A OS=Pyrococcus abyssi GN=rsmA PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 7.880e-28 Identity = 66/151 (43.71%), Postives = 98/151 (64.90%), Query Frame = 1 Query: 85 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEVGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARV 537 GQH L +++ ++ A + +DV+LE+GPG G LT +L + K V +ELD R++ L+ + N +++IQGD +K + P F+ V+NIPYQISSP TFKLL + F A++M+Q EFA+R+ A+PGD+ Y RLS+ TQ A V Sbjct: 21 GQHFLIVKDVIDKAIEVAEVSKSDVVLEVGPGLGFLTDELSKRAKKVFTIELDRRIIEILRNEYSW----NNVEIIQGDAVKVEWPSFNKVVSNIPYQISSPFTFKLL--KMEFERAVVMYQLEFALRMTAKPGDRNYSRLSLMTQALADV 165
BLAST of DN617688 vs. ExPASy Swiss-Prot
Match: RSMA_ARCFU (Probable ribosomal RNA small subunit methyltransferase A OS=Archaeoglobus fulgidus GN=rsmA PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.344e-27 Identity = 70/155 (45.16%), Postives = 92/155 (59.35%), Query Frame = 1 Query: 64 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEVGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPG-----DKLYCRLSV 513 + KS GQH+L + ++ IV A + DV+LE+G GTGNLT LL V+ +E D MV L+ RF R ++IQGD LK D PYF VANIPY+ISSPLTFKLL + FR A++M+Q+EFA RL + K YC+ + Sbjct: 1 MKLRKSLGQHMLVDRRVISRIVGYAELSEDDVVLEVGCGTGNLTSALLRKCS-VVGIEKDPLMVKRLRERFSDFIGKGRFRLIQGDALKVDFPYFTKFVANIPYKISSPLTFKLL--KTDFRLAVVMYQREFAERLCGEDNRLGVISKTYCKAEI 152
BLAST of DN617688 vs. ExPASy Swiss-Prot
Match: RSMA_METMA (Probable ribosomal RNA small subunit methyltransferase A OS=Methanosarcina mazei GN=rsmA PE=3 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 2.293e-27 Identity = 68/151 (45.03%), Postives = 95/151 (62.91%), Query Frame = 1 Query: 88 QHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEVGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVS 540 QH L + ++ IV A + D +LEIG G GNLT++L K VIAVELD +V L RF + + +++I GD LK D P FD V+N+PY ISS +TFKLL H+ F+ ++M+Q EFA+R+V+ PG K Y RL+++T A S Sbjct: 18 QHFLIDAGYLDRIVAAAELSPQDTVLEIGAGIGNLTERLARRAKKVIAVELDPALVSVLHDRFDA---AENIEIIAGDALKVDFPEFDKVVSNLPYSISSEITFKLLRHK--FKLGVLMYQYEFAVRMVSPPGCKDYSRLTIDTCYFADAS 163 The following BLAST results are available for this feature:
BLAST of DN617688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617688 ID=DN617688; Name=DN617688; organism=Citrus sinensis; type=EST; length=548bpback to top |