DN617687
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.991e-36 Identity = 71/99 (71.72%), Postives = 80/99 (80.81%), Query Frame = -1 Query: 408 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSG 704 RRVPC K+GG+RFT+NG YFNLVLVTNVAGAGD+ VS+KG+ T W MSRNWGQNWQSN+ L GQ+LSF+VT SD RT TS NVA WQFGQTF G Sbjct: 145 RRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEG 243
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.991e-36 Identity = 71/99 (71.72%), Postives = 80/99 (80.81%), Query Frame = -1 Query: 408 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSG 704 RRVPC K+GG+RFT+NG YFNLVLVTNVAGAGD+ VS+KG+ T W MSRNWGQNWQSN+ L GQ+LSF+VT SD RT TS NVA WQFGQTF G Sbjct: 145 RRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEG 243
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.458e-35 Identity = 69/99 (69.70%), Postives = 80/99 (80.81%), Query Frame = -1 Query: 408 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSG 704 RRV C++ GGIRFTING YFNLVLVTNV GAGD+ VS+KG+ T+W MSRNWGQNWQSNS L GQ+LSF VT SDRR+ S+NVAP W FGQT++G Sbjct: 152 RRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLMSRNWGQNWQSNSYLNGQSLSFVVTTSDRRSVVSFNVAPPTWSFGQTYTG 250
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.443e-34 Identity = 69/100 (69.00%), Postives = 82/100 (82.00%), Query Frame = -1 Query: 408 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQ-WLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSG 704 RRVPC K+GGIRFTING YFNLVL++NV GAGD+ VS+KG+ TQ W +MSRNWGQNWQSNS + Q+LSF+VT SD RT S +VAP+NWQFGQT+ G Sbjct: 151 RRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQTYQG 250
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.884e-34 Identity = 71/100 (71.00%), Postives = 81/100 (81.00%), Query Frame = -1 Query: 408 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANT-QWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSG 704 RRVPC K GGIRFTING YF+LVL+TNV GAGDI VS+KG+ T QW SMSRNWGQNWQSN+ L GQ+LSF+VT SD RT S++V P +WQFGQTF G Sbjct: 153 RRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKGSKTDQWQSMSRNWGQNWQSNTYLRGQSLSFQVTDSDGRTVVSYDVVPHDWQFGQTFEG 252
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.214e-34 Identity = 69/99 (69.70%), Postives = 78/99 (78.79%), Query Frame = -1 Query: 408 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSG 704 RRVPC +RGGIRFTING YFNLVL+TNV GAGD+ VKG+ T W +MSRNWGQNWQSNS L GQ+LSF+VT SD +T S NVA A W FGQTF+G Sbjct: 148 RRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGWSFGQTFTG 246
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 1.221e-33 Identity = 68/99 (68.69%), Postives = 76/99 (76.77%), Query Frame = -1 Query: 408 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSG 704 RRV C K+GGIRFTI G YFNLVLVTNV GAGD+ VSVKG+ + W +MS NWG NWQ+ + L GQ LSFRVT SD RT TS NVAP+ W FGQTFSG Sbjct: 147 RRVACAKQGGIRFTITGHSYFNLVLVTNVGGAGDVTAVSVKGSRSGWQAMSHNWGANWQNGANLDGQPLSFRVTASDGRTVTSDNVAPSGWSFGQTFSG 245
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.764e-32 Identity = 66/103 (64.08%), Postives = 80/103 (77.67%), Query Frame = -1 Query: 405 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK---GANTQWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGK 704 RRV CR++GG+RFTING YFNLVLV+NV GAGD+ V+VK G +W +M+RNWGQNWQS + L GQALSF VT DRR+ S+NVAPA W FGQTF+G+ Sbjct: 159 RRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVKAGGGRKARWQAMARNWGQNWQSGALLDGQALSFTVTTGDRRSVVSYNVAPAGWAFGQTFTGR 261
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.131e-32 Identity = 65/106 (61.32%), Postives = 80/106 (75.47%), Query Frame = -1 Query: 405 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANT------QWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGK 704 RRV C ++GG+RFT+NG YFNLVLVTNV GAGD+ ++VKG+ + +W MSRNWGQNWQSN+ L G+ALSFRVT D R+ T +VAPA WQFGQTF G+ Sbjct: 152 RRVACARKGGVRFTVNGHAYFNLVLVTNVGGAGDVRSLAVKGSGSGSRVGGRWQPMSRNWGQNWQSNAYLDGKALSFRVTAGDGRSLTCADVAPAGWQFGQTFEGR 257
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 5.131e-32 Identity = 64/98 (65.31%), Postives = 77/98 (78.57%), Query Frame = -1 Query: 411 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFS 704 +RVPC K+GG+RFTING YF LVLV+NV G G I VS+KG+ T W++MSRNWG NWQSN+ L GQ+LSF+VT SD +T T +VAPA W FGQTFS Sbjct: 158 QRVPCAKQGGVRFTINGRDYFELVLVSNVGGVGSIQSVSIKGSRTGWMAMSRNWGVNWQSNAYLDGQSLSFKVTSSDGQTLTFLDVAPAGWTFGQTFS 255 The following BLAST results are available for this feature:
BLAST of DN617687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617687 ID=DN617687; Name=DN617687; organism=Citrus sinensis; type=EST; length=704bpback to top |