DN617687
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 5.673e-31 Identity = 61/100 (61.00%), Postives = 73/100 (73.00%), Query Frame = -1 Query: 405 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGK 704 RR+ CRK G +RFT++G F VL+TNVAG+GDI V +KG+ T WL M RNWGQNW N+ L QALSF VT SDR T TS+NV+P NW +GQTF GK Sbjct: 162 RRINCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHINADLRNQALSFEVTSSDRSTVTSYNVSPKNWNYGQTFEGK 261
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 7.409e-31 Identity = 59/98 (60.20%), Postives = 76/98 (77.55%), Query Frame = -1 Query: 411 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFS 704 +RVPC++ GGIRF I+G YF LV VTNV G+G + ++S+KG+NT W++MSRNWG NWQSN+ L GQ+LSF V D R T+WNVAP+NW FG T+S Sbjct: 152 KRVPCQRSGGIRFAISGHDYFELVTVTNVGGSGVVAQMSIKGSNTGWMAMSRNWGANWQSNAYLAGQSLSFIVQLDDGRKVTAWNVAPSNWFFGATYS 249
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.264e-30 Identity = 61/96 (63.54%), Postives = 73/96 (76.04%), Query Frame = -1 Query: 414 RVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTF 701 R PCR+ GGIRF I G Y+ LVLVTNVAG+G + VKG+ T+WLSMSRNWG+NWQSN+ L GQALSFRV D T+++VAPANWQFG T+ Sbjct: 151 RTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQALSFRVQADDGGVVTAYDVAPANWQFGSTY 246
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.816e-30 Identity = 65/100 (65.00%), Postives = 74/100 (74.00%), Query Frame = -1 Query: 408 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQ-WLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSG 704 RRV C+K+GGIRFTING YFNLVLVTNV GAGD+ V+VK + W ++SRNWGQNWQS + L GQALSFRVT D R+ S N P W FGQTFSG Sbjct: 188 RRVACQKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVKSERSAAWQALSRNWGQNWQSAALLDGQALSFRVTTGDGRSVVSNNAVPRGWSFGQTFSG 287
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.816e-30 Identity = 58/98 (59.18%), Postives = 75/98 (76.53%), Query Frame = -1 Query: 411 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFS 704 +RVPC+K GGIRFTI+G YF LV V NV G+G + +VS+KG+ T W++MSRNWGQNWQSN+ L Q+LSF+V D R T WN+AP+NW FG T++ Sbjct: 146 KRVPCQKSGGIRFTISGRDYFELVTVFNVGGSGVVAQVSIKGSKTDWMAMSRNWGQNWQSNAYLNTQSLSFKVKLDDAREVTVWNIAPSNWNFGTTYT 243
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.677e-30 Identity = 58/98 (59.18%), Postives = 75/98 (76.53%), Query Frame = -1 Query: 411 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFS 704 RRVPC++ GGIRF +NG YF LVLVTNV G+G + ++ +KG+ T W++MSRNWG NWQSN++L GQALSFRV D R T+ +VAPA W FG T++ Sbjct: 148 RRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQMWIKGSGTGWMAMSRNWGANWQSNARLDGQALSFRVQADDGRVVTAADVAPAGWSFGATYT 245
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 2.635e-28 Identity = 57/100 (57.00%), Postives = 68/100 (68.00%), Query Frame = -1 Query: 405 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGK 704 RR+PC K GG++F G YF +VL+ NV GAGDI V VKG T W++M +NWGQNW + + L GQ LSFRVT SD T WNV P NW FGQTF G+ Sbjct: 171 RRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWGQNWTTITVLTGQGLSFRVTTSDGITKDFWNVMPKNWGFGQTFDGR 270
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 3.442e-28 Identity = 59/101 (58.42%), Postives = 71/101 (70.30%), Query Frame = -1 Query: 405 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGAN-TQWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGK 704 +RVPC K+GG+RFTING YFNLVLVTNVA G I + + G+N T W+ M RNWG NW S S L GQ LSFRVT D +T N+ P+ W+FGQTF+ K Sbjct: 158 QRVPCIKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQTLSFRVTNMDGQTLVFKNIVPSGWKFGQTFTSK 258
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.442e-28 Identity = 56/98 (57.14%), Postives = 72/98 (73.47%), Query Frame = -1 Query: 411 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFS 704 +RV C ++GG+RFTING YF LVL+TNV G G I V +KG T W++MSRNWG NWQ+N+ L QA+SF VT + +T +VAP+NWQFGQTF+ Sbjct: 147 QRVSCTRKGGVRFTINGNSYFELVLITNVGGPGSIKSVQIKGTKTGWVTMSRNWGANWQANNYLNNQAISFSVTSTAGKTLVFEDVAPSNWQFGQTFT 244
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 4.495e-28 Identity = 59/101 (58.42%), Postives = 71/101 (70.30%), Query Frame = -1 Query: 405 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGAN-TQWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGK 704 +RVPC K+GG+RFTING YFNLVLVTNVA G I + + G+N T W+ M RNWG NW S S L GQ LSFRVT D +T N+ P+ W+FGQTF+ K Sbjct: 174 QRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGWKFGQTFASK 274 The following BLAST results are available for this feature:
BLAST of DN617687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617687 ID=DN617687; Name=DN617687; organism=Citrus sinensis; type=EST; length=704bpback to top |