DN617687
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 8.477e-27 Identity = 56/98 (57.14%), Postives = 70/98 (71.43%), Query Frame = -1 Query: 411 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFS 704 +RV C ++GG+RFT+ G YF LVL+TNVAG+G + +KG NT W+ MSRNWG NWQS + L GQALSF VT + + +VAPA WQFGQTFS Sbjct: 152 QRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRNWGANWQSLAGLAGQALSFAVTTTGGQYLQFQDVAPAWWQFGQTFS 249
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 8.477e-27 Identity = 56/98 (57.14%), Postives = 70/98 (71.43%), Query Frame = -1 Query: 411 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFS 704 ++V C + GG+RFTI G YF LVLVTN+AG+G I +SVKG++T W+ MSRNWG NWQ + L GQALSF VT + +T +V PA W FGQTFS Sbjct: 145 QQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVKGSSTGWIQMSRNWGANWQCLAGLAGQALSFTVTSTGGQTIVFDSVVPAGWSFGQTFS 242
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.107e-26 Identity = 57/100 (57.00%), Postives = 72/100 (72.00%), Query Frame = -1 Query: 411 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGAN--TQWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFS 704 RRVPCR+RGG+RFT+ G YF LVLVTNVA AG + + V+G+ W++MSRNWG NWQS + L GQ LSFRVT +D +T V P +W+FGQTF+ Sbjct: 158 RRVPCRRRGGVRFTVAGRDYFELVLVTNVAAAGSVRSMEVRGSRRGAGWMAMSRNWGANWQSLAYLDGQGLSFRVTATDGQTIVFAGVVPPSWRFGQTFA 257
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.107e-26 Identity = 56/98 (57.14%), Postives = 70/98 (71.43%), Query Frame = -1 Query: 411 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFS 704 ++V C + GG+RF INGF YF LVLVTN+AG+G IV +SVKG+ T W+ M+RNWG NWQ + L GQALSF VT + +T + PA W FGQTFS Sbjct: 136 QQVKCWRYGGVRFIINGFNYFELVLVTNMAGSGSIVSMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGWSFGQTFS 233
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.221e-26 Identity = 55/100 (55.00%), Postives = 68/100 (68.00%), Query Frame = -1 Query: 405 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGK 704 RRV C + GG+RFTI G F VL+TNVA G++ V VKG+ T W+ M RNWGQNWQ ++ L GQ LSF VTG RT +++VAP +W F QTF GK Sbjct: 157 RRVSCDRAGGMRFTITGGASFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRGQPLSFEVTGGRGRTVVAYSVAPPDWMFAQTFEGK 256
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.495e-26 Identity = 53/101 (52.48%), Postives = 74/101 (73.27%), Query Frame = -1 Query: 405 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQ-WLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGK 704 RRV C++RGG+RFT+ G FN+V+++NV G G + V+V+G+ + WL M+RNWG NWQS+ L GQ LSF+VT +D +T T NV P++W FGQTFS + Sbjct: 147 RRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQSSGDLRGQRLSFKVTLTDSKTQTFLNVVPSSWWFGQTFSSR 247
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 5.495e-26 Identity = 52/100 (52.00%), Postives = 68/100 (68.00%), Query Frame = -1 Query: 405 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGK 704 RRV C + GG+RF + G +F VL++NV GAGD+ V +KG + WLSM RNWGQ W NS GQ LSF +T SD +T T++NV P W FG+T++GK Sbjct: 154 RRVNCLRDGGVRFAVAGRSFFLTVLISNVGGAGDVRSVKIKGTESGWLSMGRNWGQIWHINSDFRGQPLSFELTSSDGKTLTNYNVVPKEWDFGKTYTGK 253
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.224e-25 Identity = 54/98 (55.10%), Postives = 75/98 (76.53%), Query Frame = -1 Query: 414 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANT-QWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTF 704 ++V CR+ GG+RFTING YF LVL++NVAG G+I +V +KG+ + +W +MSRNWG N+QSN+ L GQ+LSF+V SD + NV P+NW+FGQ+F Sbjct: 152 KKVGCRRSGGMRFTINGRNYFELVLISNVAGGGEISKVWIKGSKSNKWETMSRNWGANYQSNTYLNGQSLSFKVQLSDGSIKAALNVVPSNWRFGQSF 249
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 114.39 bits (285), Expect = 6.075e-25 Identity = 54/100 (54.00%), Postives = 66/100 (66.00%), Query Frame = -1 Query: 405 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGK 704 RRVPC K GG++F + G +L NV GAGDI+ VS KG+ T W+ MSR WGQNW +N L GQ++S RVT SD T +V PA+W FGQTF GK Sbjct: 160 RRVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVSAKGSKTAWVVMSRYWGQNWTTNVNLTGQSVSLRVTTSDGITKDFTDVMPASWGFGQTFDGK 259
BLAST of DN617687 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.075e-25 Identity = 51/100 (51.00%), Postives = 71/100 (71.00%), Query Frame = -1 Query: 405 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGK 704 RRV C +RGG+RF+++G +F VL++NV G++V V VKG T W+ M+RNWGQNW S+ L+GQ+LSF VT +T S++VAP W+FG T+ GK Sbjct: 153 RRVKCGRRGGLRFSLSGSSHFFQVLISNVGLDGEVVGVKVKGHTTAWIPMARNWGQNWHSSLDLIGQSLSFEVTLKGGKTIASYDVAPPYWRFGMTYQGK 252 The following BLAST results are available for this feature:
BLAST of DN617687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617687 ID=DN617687; Name=DN617687; organism=Citrus sinensis; type=EST; length=704bpback to top |