DN617686

Overview
NameDN617686
Unique NameDN617686
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10529 contig Csv1_Contig10529:100..715. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 6.039e-73
Identity = 124/164 (75.61%), Postives = 140/164 (85.37%), Query Frame = 2
Query:  125 GPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVS 616
            G WQSAHATFYGG DASGTMGGACGYGNLYSQGYG NTAALSTALFN+G +CG+C+EL+C      C PG+  I +TATNFCPPN+  PSD+GGWCNPPRPHFD+A P FL +AQYRAGIVPVS+RRVPC K+GG+RFT+NG  YFNLVLVTNVAGAGD+  VS
Sbjct:   22 GGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGS--ITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVS 183          
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 6.039e-73
Identity = 124/164 (75.61%), Postives = 140/164 (85.37%), Query Frame = 2
Query:  125 GPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVS 616
            G WQSAHATFYGG DASGTMGGACGYGNLYSQGYG NTAALSTALFN+G +CG+C+EL+C      C PG+  I +TATNFCPPN+  PSD+GGWCNPPRPHFD+A P FL +AQYRAGIVPVS+RRVPC K+GG+RFT+NG  YFNLVLVTNVAGAGD+  VS
Sbjct:   22 GGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGS--ITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVS 183          
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 8.721e-72
Identity = 122/164 (74.39%), Postives = 135/164 (82.32%), Query Frame = 2
Query:  125 GPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVS 616
            G WQ  HATFYGG DASGTMGGACGYGNLY QGYG NTAALSTALFNNGL+CGAC+E+KC  DP+WC      I +TATNFCPPN    +DNGGWCNPP  HFDLA P FL++AQYRAGIVPVS+RRVPC K+GGIRFTING  YFNLVL++NV GAGD+  VS
Sbjct:   28 GGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCNDDPRWCL--GSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVS 189          
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 8.721e-72
Identity = 120/162 (74.07%), Postives = 139/162 (85.80%), Query Frame = 2
Query:  131 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVS 616
            W +A ATFYGG+DASGTMGGACGYGNLYSQGYG NTAALSTALFN G SCGACF++KC  DP+WC  G   I +T TNFCPPNFAQ ++ GGWCNPP+ HFDLA P+FL++AQY+AG+VPV YRRV CR++GGIRFTING  YFNLVL+TNVAGAGD++ VS
Sbjct:   29 WVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGT--ITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVS 188          
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 1.488e-71
Identity = 124/168 (73.81%), Postives = 142/168 (84.52%), Query Frame = 2
Query:  122 GGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKC---GGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVS 616
            GG W SAHATFYGG DASGTMGGACGYGNLYSQGYG NTAALSTALFNNGLSCGACFE++C   GG    C PG+  +++TATNFCPPN A PSD+GGWCNPPR HFD++ P+F ++A ++AGIVPVSYRRV C+K+GGIRFTING  YFNLVLVTNV GAGD+  V+
Sbjct:   61 GGGWSSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAGGGGSHSCLPGS--VVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALFKAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVA 226          
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 268.855 bits (686), Expect = 1.488e-71
Identity = 122/164 (74.39%), Postives = 140/164 (85.37%), Query Frame = 2
Query:  125 GPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVS 616
            G W+  HATFYGG+DASGTMGGACGYGNL+SQGYG+ TAALSTALFN+G  CGACFEL+C  DP+WC PG+  I+++ATNFCPPNFA  +DNGGWCNPP  HFDLA P FL++AQYRAGIVPV++RRVPC K GGIRFTING  YF+LVL+TNV GAGDI  VS
Sbjct:   30 GGWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFNSGQKCGACFELQCEDDPEWCIPGS--IIVSATNFCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVS 191          
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 4.785e-70
Identity = 117/161 (72.67%), Postives = 135/161 (83.85%), Query Frame = 2
Query:  125 GPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQW-CNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 604
            G WQ  HATFYGG DASGTMGGACGYGNLYSQGYG +TAALSTALFN GLSCG+C+EL+C GD +  C PG   + +TATNFCPPN+A PSD GGWCNPPR HFDLA P FL++A++ AGIVPVS+RRV C ++GG+RFT+NG  YFNLVLVTNV GAGD+
Sbjct:   26 GQWQPGHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNRGLSCGSCYELRCAGDHRRSCLPGGATVTVTATNFCPPNYALPSDGGGWCNPPRRHFDLAEPAFLRIARHAAGIVPVSFRRVACARKGGVRFTVNGHAYFNLVLVTNVGGAGDV 186          
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 2.223e-67
Identity = 119/173 (68.79%), Postives = 138/173 (79.77%), Query Frame = 2
Query:  101 KIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRV 613
            KI  V AG  W  AHATFYGGSDASGTMGGACGYGNLY+ GY  NTAALSTALFN+G SCG C+++ C     PQWC  G  +I ITATNFCPPNFAQ SDNGGWCNPPRPHFD+A P FL +A+Y+AGIVP+ Y++V CR+ GG+RFTING  YF LVL++NVAG G+I +V
Sbjct:   20 KISSVSAG--WLQAHATFYGGSDASGTMGGACGYGNLYTDGYKTNTAALSTALFNDGKSCGGCYQILCDATKVPQWCLKGK-SITITATNFCPPNFAQASDNGGWCNPPRPHFDMAQPAFLTIAKYKAGIVPILYKKVGCRRSGGMRFTINGRNYFELVLISNVAGGGEISKV 189          
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2)

HSP 1 Score: 250.751 bits (639), Expect = 4.192e-66
Identity = 116/166 (69.88%), Postives = 130/166 (78.31%), Query Frame = 2
Query:  113 VFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 604
            V A   WQ AHATFYGG+DASGTMGGACGYGNLYSQGYG   AALSTALFN+G SCG C+++ C     PQWC PG   + ITATNFCPPN+  PSDNGGWCNPPRPHFD+A P + K+  Y AGI+PV Y+RVPC K+GG+RFTING  YF LVLVTNVA AG I
Sbjct:   33 VAAPTQWQKAHATFYGGADASGTMGGACGYGNLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPG-VTVTITATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTINGHDYFQLVLVTNVAAAGSI 197          
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2)

HSP 1 Score: 249.98 bits (637), Expect = 7.151e-66
Identity = 121/170 (71.18%), Postives = 132/170 (77.65%), Query Frame = 2
Query:  113 VFAGGP--WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVS 616
            V AGG   W S  ATFYGGSDASGTMGGACGYGNLYS GYG +TAALSTALFNNG SCGACFE++CGG    C  G  A+  TATN CPPN+A   D GGWCNPPRPHFD+A P F ++AQ RAG+VPV YRRV C K+GGIRFTI G  YFNLVLVTNV GAGD+  VS
Sbjct:   19 VAAGGDSGWSSGSATFYGGSDASGTMGGACGYGNLYSAGYGTSTAALSTALFNNGQSCGACFEVRCGGGGS-CLAGTVAV--TATNLCPPNYALAGDAGGWCNPPRPHFDMAEPAFTRIAQARAGVVPVQYRRVACAKQGGIRFTITGHSYFNLVLVTNVGGAGDVTAVS 185          
The following BLAST results are available for this feature:
BLAST of DN617686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
EXPA4_ORYSJ6.039e-7375.61Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA4_ORYSI6.039e-7375.61Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4... [more]
EXPA8_ARATH8.721e-7274.39Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 ... [more]
EXP14_ARATH8.721e-7274.07Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=... [more]
EXPA5_ORYSJ1.488e-7173.81Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA2_ARATH1.488e-7174.39Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 ... [more]
EXPA6_ORYSJ4.785e-7072.67Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP17_ARATH2.223e-6768.79Putative expansin-A17 OS=Arabidopsis thaliana GN=E... [more]
EXP23_ORYSJ4.192e-6669.88Expansin-A23 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP11_ORYSJ7.151e-6671.18Expansin-A11 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01I21_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001I21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617686 ID=DN617686; Name=DN617686; organism=Citrus sinensis; type=EST; length=616bp
CAACTTCTCTGTCTCCCTCTCTTCAACTCCAACAATGGCTCTTTTCAGAA
TGCTCTGCTTTTTCTCACTGGCACTCTCCTTATTTGCGACGGCCAACGCC
AAGATTCCCGGTGTCTTCGCCGGTGGCCCCTGGCAATCGGCCCACGCCAC
TTTTTACGGTGGCAGCGATGCTTCCGGCACTATGGGTGGTGCTTGTGGGT
ACGGGAATCTGTACAGCCAGGGCTACGGAGTGAACACGGCGGCTCTCAGC
ACGGCGCTGTTCAACAACGGCTTGAGCTGCGGCGCGTGCTTCGAGTTAAA
GTGCGGCGGCGACCCGCAGTGGTGTAACCCGGGTAACCCGGCCATTCTGA
TCACGGCCACCAACTTTTGCCCCCCGAACTTCGCTCAGCCCTCCGATAAT
GGCGGGTGGTGCAACCCTCCTCGCCCTCATTTCGATCTGGCCATGCCTAT
GTTCCTCAAGCTTGCCCAGTACCGCGCTGGTATCGTCCCCGTTTCTTACC
GCAGGGTGCCCTGCAGAAAGCGAGGCGGAATCAGATTCACAATTAACGGT
TTCCGTTACTTCAACTTGGTCTTGGTCACCAACGTCGCGGGCGCAGGGGA
TATCGTGCGCGTGAGC
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