DN617686
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 246.899 bits (629), Expect = 6.053e-65 Identity = 112/160 (70.00%), Postives = 127/160 (79.38%), Query Frame = 2 Query: 131 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 604 WQ AHATFYGG+DASGTMGG CGYG+LYSQGYG AALSTALFN+G SCG C+++ C PQWC PG + ITATNFCPPN+ PSDNGGWCNPPRPHFD+A P + K+ Y AGI+PV Y+RVPC K+GG+RFTING YFNLVLVTNVA G I Sbjct: 34 WQKAHATFYGGADASGTMGGGCGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPG-VTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQRVPCIKKGGVRFTINGHDYFNLVLVTNVATTGSI 192
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 246.514 bits (628), Expect = 7.906e-65 Identity = 110/165 (66.67%), Postives = 130/165 (78.79%), Query Frame = 2 Query: 116 FAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGG--DPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 604 FA W ATFYGGSDASGTMGGACGYGNLY+QGYG TAALSTALF++G SCG C+ L C DP+WC G ++ +TATNFCPPN+A PSD+GGWCNPPRPHFD+A P + ++ YR GIVPV++RRVPCR+RGG+RFT+ G YF LVLVTNVA AG + Sbjct: 29 FAASGWSKGTATFYGGSDASGTMGGACGYGNLYTQGYGTRTAALSTALFDDGASCGQCYALTCDARADPRWCRAG-ASVTVTATNFCPPNYALPSDDGGWCNPPRPHFDMAQPAWERIGVYRGGIVPVAFRRVPCRRRGGVRFTVAGRDYFELVLVTNVAAAGSV 192
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 246.514 bits (628), Expect = 7.906e-65 Identity = 112/158 (70.89%), Postives = 127/158 (80.38%), Query Frame = 2 Query: 131 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAG 598 W AHATFYGG+DASGTMGGACGYG+LYSQGYG AALSTALFN+G SCG C+++ C PQWC PG + ITATNFCPPN+ PSDNGGWCNPPRPHFD+A P + K+ YRAGI+PV Y+RVPC K+GG+RFTING YFNLVLVTNVA G Sbjct: 52 WLKAHATFYGGADASGTMGGACGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCRPG-VTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVIYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTG 208
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 244.588 bits (623), Expect = 3.004e-64 Identity = 111/160 (69.38%), Postives = 127/160 (79.38%), Query Frame = 2 Query: 131 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 604 W AHATFYGG+DASGTMGGACGY +LYSQGYG AALSTALFN+G SCG C+++ C PQWC PG + +TATNFCPPN+ PSDNGGWCNPPRPHFD+A P + K+ YRAGI+PV Y+RVPC K+GG+RFTING YFNLVLVTNVA G I Sbjct: 50 WLKAHATFYGGADASGTMGGACGYVDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPG-VTVTVTATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVMYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGSI 208
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 243.817 bits (621), Expect = 5.125e-64 Identity = 111/167 (66.47%), Postives = 129/167 (77.25%), Query Frame = 2 Query: 110 GVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGG--DPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 604 G W AHATFYGG+DASGTMGGACGYGNLY+QGYG TAALSTALFN+GL+CG C++L C D WC PG ++ ITATNFCPPN+ PSD+GGWCNPPRPHFD+A P + K+ YR GI+PV Y+RVPC K+GG+RFTING YF LVL+TNV AG I Sbjct: 27 GALEPSGWVRAHATFYGGADASGTMGGACGYGNLYAQGYGTRTAALSTALFNDGLACGQCYKLVCDRKTDRTWCKPG-VSVTITATNFCPPNWDLPSDSGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAGSI 192
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 6.693e-64 Identity = 114/164 (69.51%), Postives = 131/164 (79.88%), Query Frame = 2 Query: 125 GPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVS 616 GPW +AHATFYGG DASGTMGGACGYGNLYSQGYG+ TAALSTALF+ GLSCGACFEL C DPQWC G +I++TATNFCPP GG C+PP HFDL+ P++ K+A Y++GI+PV YRRV C++ GGIRFTING YFNLVLVTNV GAGD+ VS Sbjct: 36 GPWINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGR-SIVVTATNFCPP--------GGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVS 190
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 1.491e-63 Identity = 111/172 (64.53%), Postives = 134/172 (77.91%), Query Frame = 2 Query: 119 AGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGG----DPQWCNP--GNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVS 616 A G W AHATFYGG+DASGTMGGACGYGN Y QGYG +TAALS +F +GLSCGACFEL+CGG D + C P +I++TAT+ CP N A P D GGWCNPP HFDL+ P FL++A++++GIVPVSYRRV CR++GG+RFTING YFNLVLV+NV GAGD+ V+ Sbjct: 26 AAGRWTDAHATFYGGADASGTMGGACGYGNTYGQGYGTDTAALSAVMFGDGLSCGACFELRCGGGGGGDRRGCLPPAAGKSIVVTATDLCPANHALPGDRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVA 197
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 6.264e-62 Identity = 105/169 (62.13%), Postives = 126/169 (74.56%), Query Frame = 2 Query: 110 GVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVS 616 G F GPW+ AHATFYGG D SGT+ GACGY + +GYGV T A+ST LF G CGAC+E+KC P C G +++TATN CPPN Q +DNGGWCNPPR HFDL+MP FL++AQ +AGIVP+SYRRVPC K GGIR+TI G YFNLV+V+NV GAGD+ +S Sbjct: 35 GKFTAGPWKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLS 203
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.396e-61 Identity = 115/194 (59.28%), Postives = 133/194 (68.56%), Query Frame = 2 Query: 35 MALFRMLCXXXXXXXXXXTANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGG-DPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRV 613 MA RML TA+A W A ATFYGGSDASGTMGGACGYG+LY GYG TAALSTALFN G SCGACF + C QWC PG +I +TATNFCPPN+A D GGWCNPPR HFD++ P + +A YRAGIVPV+YRRVPC++ GGIRF +NG YF LVLVTNV G+G + ++ Sbjct: 1 MAAARMLVLLASLCALLLTASA--------AKWTPAFATFYGGSDASGTMGGACGYGDLYGAGYGTRTAALSTALFNGGASCGACFTIACDTRKTQWCKPGT-SITVTATNFCPPNYALSGDAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQM 185
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2) HSP 1 Score: 232.646 bits (592), Expect = 1.181e-60 Identity = 105/168 (62.50%), Postives = 128/168 (76.19%), Query Frame = 2 Query: 119 AGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVS 616 A G W S ATFYGG DASGTMGGACGYGNLY+QGYGV AALSTALFN G SCG C+ + C P+WC G A+ ITATN CPPN+A +D+GGWCNPPRPHFD++ P + + YRAGIVPV Y++V C ++GG+RFT++GF YF LVL+TNVAG+G + +S Sbjct: 23 AAGGWVSGTATFYGGKDASGTMGGACGYGNLYTQGYGVYNAALSTALFNGGASCGQCYLIMCDASKTPEWCKAGT-AVTITATNLCPPNWALANDDGGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGGVRFTVSGFNYFELVLITNVAGSGSVQAMS 189 The following BLAST results are available for this feature:
BLAST of DN617686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617686 ID=DN617686; Name=DN617686; organism=Citrus sinensis; type=EST; length=616bpback to top |